RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
COMMD6-212ENST00000497707 BRD4O60885 1362 aaPredicted RBP14.92□□□□□ -0.02
COMMD6-212ENST00000497707 ITSN1Q15811 1721 aa14.92□□□□□ -0.02
COMMD6-212ENST00000497707 NCOA3Q9Y6Q9 1424 aa14.92□□□□□ -0.02
COMMD6-212ENST00000497707 POLR3AO14802 1390 aaPredicted RBP14.91□□□□□ -0.02
COMMD6-212ENST00000497707 DSG3P32926 999 aa14.91□□□□□ -0.02
COMMD6-212ENST00000497707 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
COMMD6-212ENST00000497707 YTHDC1Q96MU7 727 aaKnown RBP14.91□□□□□ -0.02
COMMD6-212ENST00000497707 GGNBP2Q9H3C7 697 aa14.91□□□□□ -0.02
COMMD6-212ENST00000497707 C19orf44Q9H6X5 657 aa14.91□□□□□ -0.02
COMMD6-212ENST00000497707 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
COMMD6-212ENST00000497707 LRRC7Q96NW7 1537 aa14.9□□□□□ -0.02
COMMD6-212ENST00000497707 EDC4Q6P2E9 1401 aaKnown RBP14.9□□□□□ -0.02
COMMD6-212ENST00000497707 ANKRD26Q9UPS8 1709 aa14.89□□□□□ -0.03
COMMD6-212ENST00000497707 MORC1Q86VD1 984 aa14.89□□□□□ -0.03
COMMD6-212ENST00000497707 NME9Q86XW9 330 aa14.89□□□□□ -0.03
COMMD6-212ENST00000497707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.89□□□□□ -0.033e-6■■□□□ 14
COMMD6-212ENST00000497707 KIF20BQ96Q89 1820 aa14.89□□□□□ -0.03
COMMD6-212ENST00000497707 TTC21BQ7Z4L5 1316 aa14.89□□□□□ -0.03
COMMD6-212ENST00000497707 NSD2O96028 1365 aa14.88□□□□□ -0.03
COMMD6-212ENST00000497707 ORAI2Q96SN7 254 aa14.88□□□□□ -0.03
COMMD6-212ENST00000497707 NRKQ7Z2Y5 1582 aa14.88□□□□□ -0.03
COMMD6-212ENST00000497707 USP6P35125 1406 aa14.87□□□□□ -0.03
COMMD6-212ENST00000497707 C14orf37Q86TY3 774 aa14.87□□□□□ -0.03
COMMD6-212ENST00000497707 PHF8Q9UPP1 1060 aa14.87□□□□□ -0.03
COMMD6-212ENST00000497707 FBLN1P23142 703 aa14.86□□□□□ -0.03
COMMD6-212ENST00000497707 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
COMMD6-212ENST00000497707 C1orf167Q5SNV9 1468 aa14.86□□□□□ -0.03
COMMD6-212ENST00000497707 MST1RQ04912 1400 aa14.85□□□□□ -0.03
COMMD6-212ENST00000497707 TNNT2P45379 298 aaPredicted RBP14.85□□□□□ -0.03
COMMD6-212ENST00000497707 NGDNQ8NEJ9 315 aaKnown RBP14.85□□□□□ -0.03
COMMD6-212ENST00000497707 ESCO1Q5FWF5 840 aa14.84□□□□□ -0.03
COMMD6-212ENST00000497707 MTHFSP49914 203 aa14.83□□□□□ -0.04
COMMD6-212ENST00000497707 DCCP43146 1447 aa14.83□□□□□ -0.04
COMMD6-212ENST00000497707 MAP2P11137 1827 aaKnown RBP14.81□□□□□ -0.04
COMMD6-212ENST00000497707 ATF3P18847 181 aa14.81□□□□□ -0.04
COMMD6-212ENST00000497707 LTBP4Q8N2S1 1624 aa14.81□□□□□ -0.04
COMMD6-212ENST00000497707 MARF1Q9Y4F3 1742 aaKnown RBP14.8□□□□□ -0.04
COMMD6-212ENST00000497707 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
COMMD6-212ENST00000497707 TTC21AQ8NDW8 1320 aa14.8□□□□□ -0.04
COMMD6-212ENST00000497707 USP31Q70CQ4 1352 aa14.8□□□□□ -0.04
COMMD6-212ENST00000497707 OVOS2A0A0J9YW53 1432 aa14.79□□□□□ -0.04
COMMD6-212ENST00000497707 PIK3C2AO00443 1686 aa14.79□□□□□ -0.04
COMMD6-212ENST00000497707 FOXO3O43524 673 aa14.79□□□□□ -0.04
COMMD6-212ENST00000497707 MSH6P52701 1360 aa14.79□□□□□ -0.04
COMMD6-212ENST00000497707 OVOS2Q6IE36 1432 aa14.79□□□□□ -0.04
COMMD6-212ENST00000497707 CADPS2Q86UW7 1296 aa14.79□□□□□ -0.04
COMMD6-212ENST00000497707 ADAMTS8Q9UP79 889 aa14.79□□□□□ -0.04
COMMD6-212ENST00000497707 SHPRHQ149N8 1683 aa14.77□□□□□ -0.04
COMMD6-212ENST00000497707 AATKQ6ZMQ8 1374 aa14.77□□□□□ -0.04
COMMD6-212ENST00000497707 PNPLA6Q8IY17 1366 aa14.77□□□□□ -0.04
COMMD6-212ENST00000497707 PSME1Q06323 249 aa14.77□□□□□ -0.05
COMMD6-212ENST00000497707 DDX17Q92841 729 aaKnown RBP14.77□□□□□ -0.05
COMMD6-212ENST00000497707 COG3Q96JB2 828 aa14.77□□□□□ -0.05
COMMD6-212ENST00000497707 TRPM3Q9HCF6 1732 aaPredicted RBP14.77□□□□□ -0.05
COMMD6-212ENST00000497707 COL3A1P02461 1466 aaPredicted RBP14.76□□□□□ -0.05
COMMD6-212ENST00000497707 INSRP06213 1382 aa14.76□□□□□ -0.05
COMMD6-212ENST00000497707 KRT28Q7Z3Y7 464 aa14.76□□□□□ -0.05
COMMD6-212ENST00000497707 USP54Q70EL1 1684 aa14.76□□□□□ -0.05
COMMD6-212ENST00000497707 KIF1AQ12756 1690 aa14.75□□□□□ -0.05
COMMD6-212ENST00000497707 XPCQ01831 940 aaPredicted RBP14.75□□□□□ -0.05
COMMD6-212ENST00000497707 SLAIN2Q9P270 581 aa14.75□□□□□ -0.05
COMMD6-212ENST00000497707 HNRNPUQ00839 825 aaKnown RBP eCLIP14.74□□□□□ -0.05
COMMD6-212ENST00000497707 NUTM2GQ5VZR2 741 aa14.74□□□□□ -0.05
COMMD6-212ENST00000497707 EMILIN1Q9Y6C2 1016 aa14.74□□□□□ -0.05
COMMD6-212ENST00000497707 SENP3-EIF4A1A0A087X0R7 540 aa14.73□□□□□ -0.05
COMMD6-212ENST00000497707 NLRP6P59044 892 aa14.73□□□□□ -0.05
COMMD6-212ENST00000497707 RRS1Q15050 365 aaKnown RBP14.73□□□□□ -0.05
COMMD6-212ENST00000497707 BRINP3Q76B58 766 aa14.73□□□□□ -0.05
COMMD6-212ENST00000497707 ABTB2Q8N961 1025 aa14.73□□□□□ -0.05
COMMD6-212ENST00000497707 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
COMMD6-212ENST00000497707 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
COMMD6-212ENST00000497707 ZNF219Q9P2Y4 722 aaPredicted RBP14.72□□□□□ -0.05
COMMD6-212ENST00000497707 BLMP54132 1417 aaPredicted RBP14.72□□□□□ -0.05
COMMD6-212ENST00000497707 PEAK1Q9H792 1746 aa14.72□□□□□ -0.05
COMMD6-212ENST00000497707 ALS2Q96Q42 1657 aa14.7□□□□□ -0.06
COMMD6-212ENST00000497707 PXDNQ92626 1479 aa14.69□□□□□ -0.06
COMMD6-212ENST00000497707 IL13P35225 146 aa14.69□□□□□ -0.06
COMMD6-212ENST00000497707 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
COMMD6-212ENST00000497707 MAP3K19Q56UN5 1328 aa14.68□□□□□ -0.06
COMMD6-212ENST00000497707 WDR43Q15061 677 aaKnown RBP eCLIP14.68□□□□□ -0.06
COMMD6-212ENST00000497707 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
COMMD6-212ENST00000497707 PPM1GO15355 546 aaPredicted RBP14.67□□□□□ -0.06
COMMD6-212ENST00000497707 DIAPH1O60610 1272 aaKnown RBP14.67□□□□□ -0.06
COMMD6-212ENST00000497707 CENPBP07199 599 aaPredicted RBP14.67□□□□□ -0.06
COMMD6-212ENST00000497707 CCDC146Q8IYE0 955 aa14.67□□□□□ -0.06
COMMD6-212ENST00000497707 CDK12Q9NYV4 1490 aaPredicted RBP14.67□□□□□ -0.06
COMMD6-212ENST00000497707 SOS2Q07890 1332 aaPredicted RBP14.66□□□□□ -0.06
COMMD6-212ENST00000497707 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
COMMD6-212ENST00000497707 NFAT5O94916 1531 aa14.66□□□□□ -0.06
COMMD6-212ENST00000497707 SOX12O15370 315 aa14.66□□□□□ -0.06
COMMD6-212ENST00000497707 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
COMMD6-212ENST00000497707 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
COMMD6-212ENST00000497707 USP19O94966 1318 aa14.66□□□□□ -0.06
COMMD6-212ENST00000497707 SPATA31A3Q5VYP0 1347 aa14.66□□□□□ -0.06
COMMD6-212ENST00000497707 NPHP3Q7Z494 1330 aa14.66□□□□□ -0.06
COMMD6-212ENST00000497707 PLEKHF1Q96S99 279 aa14.65□□□□□ -0.06
COMMD6-212ENST00000497707 SLIT3O75094 1523 aa14.65□□□□□ -0.06
COMMD6-212ENST00000497707 MED1Q15648 1581 aaPredicted RBP14.64□□□□□ -0.07
COMMD6-212ENST00000497707 ABCB7O75027 752 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms