RNA–Protein interactions for RNA: ENST00000497410.5

BRD9-214, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,916 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-214ENST00000497410 PMFBP1Q8TBY8 1022 aa22.39■■□□□ 1.17
BRD9-214ENST00000497410 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
BRD9-214ENST00000497410 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
BRD9-214ENST00000497410 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
BRD9-214ENST00000497410 NME9Q86XW9 330 aa22.36■■□□□ 1.17
BRD9-214ENST00000497410 NGDNQ8NEJ9 315 aaKnown RBP22.36■■□□□ 1.17
BRD9-214ENST00000497410 TNNT2P45379 298 aaPredicted RBP22.35■■□□□ 1.17
BRD9-214ENST00000497410 PHF8Q9UPP1 1060 aa22.35■■□□□ 1.17
BRD9-214ENST00000497410 TTC21AQ8NDW8 1320 aa22.35■■□□□ 1.17
BRD9-214ENST00000497410 LRRC7Q96NW7 1537 aa22.35■■□□□ 1.17
BRD9-214ENST00000497410 SHPRHQ149N8 1683 aa22.33■■□□□ 1.17
BRD9-214ENST00000497410 ZNF335Q9H4Z2 1342 aaPredicted RBP22.33■■□□□ 1.16
BRD9-214ENST00000497410 KIF1AQ12756 1690 aa22.32■■□□□ 1.16
BRD9-214ENST00000497410 OVOS2A0A0J9YW53 1432 aa22.32■■□□□ 1.16
BRD9-214ENST00000497410 OVOS2Q6IE36 1432 aa22.32■■□□□ 1.16
BRD9-214ENST00000497410 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
BRD9-214ENST00000497410 MTHFSP49914 203 aa22.32■■□□□ 1.16
BRD9-214ENST00000497410 BLMP54132 1417 aaPredicted RBP22.32■■□□□ 1.16
BRD9-214ENST00000497410 USP54Q70EL1 1684 aa22.31■■□□□ 1.16
BRD9-214ENST00000497410 MST1RQ04912 1400 aa22.31■■□□□ 1.16
BRD9-214ENST00000497410 COG3Q96JB2 828 aa22.31■■□□□ 1.16
BRD9-214ENST00000497410 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
BRD9-214ENST00000497410 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
BRD9-214ENST00000497410 MAP2P11137 1827 aaKnown RBP22.3■■□□□ 1.16
BRD9-214ENST00000497410 ESCO1Q5FWF5 840 aa22.29■■□□□ 1.16
BRD9-214ENST00000497410 USP31Q70CQ4 1352 aa22.29■■□□□ 1.16
BRD9-214ENST00000497410 ZRANB1Q9UGI0 708 aa22.29■■□□□ 1.16
BRD9-214ENST00000497410 MSH6P52701 1360 aa22.29■■□□□ 1.16
BRD9-214ENST00000497410 ZBED9Q6R2W3 1325 aa22.29■■□□□ 1.16
BRD9-214ENST00000497410 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
BRD9-214ENST00000497410 SMG6Q86US8 1419 aaKnown RBP22.28■■□□□ 1.16
BRD9-214ENST00000497410 ATF3P18847 181 aa22.28■■□□□ 1.16
BRD9-214ENST00000497410 WDR43Q15061 677 aaKnown RBP eCLIP22.28■■□□□ 1.16
BRD9-214ENST00000497410 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
BRD9-214ENST00000497410 CADPS2Q86UW7 1296 aa22.27■■□□□ 1.16
BRD9-214ENST00000497410 ADAMTS8Q9UP79 889 aa22.27■■□□□ 1.16
BRD9-214ENST00000497410 PNPLA6Q8IY17 1366 aa22.26■■□□□ 1.15
BRD9-214ENST00000497410 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
BRD9-214ENST00000497410 MARF1Q9Y4F3 1742 aaKnown RBP22.26■■□□□ 1.15
BRD9-214ENST00000497410 POLKQ9UBT6 870 aa22.24■■□□□ 1.15
BRD9-214ENST00000497410 TRPM3Q9HCF6 1732 aaPredicted RBP22.22■■□□□ 1.15
BRD9-214ENST00000497410 CDK12Q9NYV4 1490 aaPredicted RBP22.22■■□□□ 1.15
BRD9-214ENST00000497410 PSME1Q06323 249 aa22.2■■□□□ 1.14
BRD9-214ENST00000497410 FBLN1P23142 703 aa22.19■■□□□ 1.14
BRD9-214ENST00000497410 FOXO3O43524 673 aa22.18■■□□□ 1.14
BRD9-214ENST00000497410 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
BRD9-214ENST00000497410 NLRP6P59044 892 aa22.16■■□□□ 1.14
BRD9-214ENST00000497410 ABTB2Q8N961 1025 aa22.16■■□□□ 1.14
BRD9-214ENST00000497410 LTBP4Q8N2S1 1624 aa22.15■■□□□ 1.14
BRD9-214ENST00000497410 PAK3O75914 559 aaPredicted RBP22.15■■□□□ 1.14
BRD9-214ENST00000497410 PEAK1Q9H792 1746 aa22.14■■□□□ 1.14
BRD9-214ENST00000497410 DIAPH1O60610 1272 aaKnown RBP22.14■■□□□ 1.14
BRD9-214ENST00000497410 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.14
BRD9-214ENST00000497410 NUDCQ9Y266 331 aa22.14■■□□□ 1.14
BRD9-214ENST00000497410 ALS2Q96Q42 1657 aa22.14■■□□□ 1.13
BRD9-214ENST00000497410 KRT28Q7Z3Y7 464 aa22.13■■□□□ 1.13
BRD9-214ENST00000497410 PPM1GO15355 546 aaPredicted RBP22.11■■□□□ 1.13
BRD9-214ENST00000497410 NPHP3Q7Z494 1330 aa22.1■■□□□ 1.13
BRD9-214ENST00000497410 SBNO1A3KN83 1393 aa22.1■■□□□ 1.13
BRD9-214ENST00000497410 SLAIN2Q9P270 581 aa22.1■■□□□ 1.13
BRD9-214ENST00000497410 SLIT3O75094 1523 aa22.09■■□□□ 1.13
BRD9-214ENST00000497410 NFAT5O94916 1531 aa22.09■■□□□ 1.13
BRD9-214ENST00000497410 PXDNQ92626 1479 aa22.09■■□□□ 1.13
BRD9-214ENST00000497410 KIF24Q5T7B8 1368 aa22.09■■□□□ 1.13
BRD9-214ENST00000497410 U2AF1L5P0DN76 240 aaPredicted RBP22.09■■□□□ 1.13
BRD9-214ENST00000497410 U2AF1Q01081 240 aaKnown RBP eCLIP22.09■■□□□ 1.13
BRD9-214ENST00000497410 XPCQ01831 940 aaPredicted RBP22.09■■□□□ 1.13
BRD9-214ENST00000497410 NUTM2GQ5VZR2 741 aa22.09■■□□□ 1.13
BRD9-214ENST00000497410 BRINP3Q76B58 766 aa22.09■■□□□ 1.13
BRD9-214ENST00000497410 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
BRD9-214ENST00000497410 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
BRD9-214ENST00000497410 IQSEC2Q5JU85 1478 aa22.08■■□□□ 1.13
BRD9-214ENST00000497410 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.12
BRD9-214ENST00000497410 IL13P35225 146 aa22.08■■□□□ 1.12
BRD9-214ENST00000497410 RUNDC1Q96C34 613 aa22.08■■□□□ 1.12
BRD9-214ENST00000497410 NGEFQ8N5V2 710 aa22.07■■□□□ 1.12
BRD9-214ENST00000497410 U2SURPO15042 1029 aaKnown RBP22.06■■□□□ 1.12
BRD9-214ENST00000497410 LTN1O94822 1766 aa22.06■■□□□ 1.12
BRD9-214ENST00000497410 FLT4P35916 1363 aa22.06■■□□□ 1.12
BRD9-214ENST00000497410 PHRF1Q9P1Y6 1649 aaKnown RBP22.06■■□□□ 1.12
BRD9-214ENST00000497410 USP19O94966 1318 aa22.06■■□□□ 1.12
BRD9-214ENST00000497410 APAF1O14727 1248 aa22.05■■□□□ 1.12
BRD9-214ENST00000497410 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
BRD9-214ENST00000497410 SOX12O15370 315 aa22.04■■□□□ 1.12
BRD9-214ENST00000497410 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
BRD9-214ENST00000497410 RGPD1P0DJD0 1748 aa22.04■■□□□ 1.12
BRD9-214ENST00000497410 TNS3Q68CZ2 1445 aa22.04■■□□□ 1.12
BRD9-214ENST00000497410 ZNF521Q96K83 1311 aa22.03■■□□□ 1.12
BRD9-214ENST00000497410 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
BRD9-214ENST00000497410 DDX17Q92841 729 aaKnown RBP22.03■■□□□ 1.12
BRD9-214ENST00000497410 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
BRD9-214ENST00000497410 NHSL1Q5SYE7 1610 aa22.03■■□□□ 1.12
BRD9-214ENST00000497410 NCBP3Q53F19 620 aaKnown RBP22.02■■□□□ 1.12
BRD9-214ENST00000497410 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
BRD9-214ENST00000497410 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
BRD9-214ENST00000497410 FCHSD2O94868 740 aa22.02■■□□□ 1.11
BRD9-214ENST00000497410 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.11
BRD9-214ENST00000497410 MED1Q15648 1581 aaPredicted RBP22.01■■□□□ 1.11
BRD9-214ENST00000497410 EIF4A2Q14240 407 aaKnown RBP22.01■■□□□ 1.11
BRD9-214ENST00000497410 PNNQ9H307 717 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms