RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TSC1Q92574 1164 aa8.39□□□□□ -1.07
SMC4-225ENST00000497203 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
SMC4-225ENST00000497203 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
SMC4-225ENST00000497203 PTPRNQ16849 979 aa8.38□□□□□ -1.07
SMC4-225ENST00000497203 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
SMC4-225ENST00000497203 CCNYL3P0C7X3 344 aa8.37□□□□□ -1.07
SMC4-225ENST00000497203 AVPP01185 164 aa8.36□□□□□ -1.07
SMC4-225ENST00000497203 RFC5P40937 340 aa8.36□□□□□ -1.07
SMC4-225ENST00000497203 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
SMC4-225ENST00000497203 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
SMC4-225ENST00000497203 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
SMC4-225ENST00000497203 EVA1BQ9NVM1 165 aa8.35□□□□□ -1.07
SMC4-225ENST00000497203 GTF3C3Q9Y5Q9 886 aa8.35□□□□□ -1.07
SMC4-225ENST00000497203 RPIAP49247 311 aa8.34□□□□□ -1.07
SMC4-225ENST00000497203 ZBTB24O43167 697 aaPredicted RBP8.33□□□□□ -1.08
SMC4-225ENST00000497203 AP1G2O75843 785 aa8.33□□□□□ -1.08
SMC4-225ENST00000497203 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
SMC4-225ENST00000497203 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
SMC4-225ENST00000497203 ERICH6Q7L0X2 663 aa8.33□□□□□ -1.08
SMC4-225ENST00000497203 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
SMC4-225ENST00000497203 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
SMC4-225ENST00000497203 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
SMC4-225ENST00000497203 CTHP32929 405 aa8.32□□□□□ -1.08
SMC4-225ENST00000497203 TRIM32Q13049 653 aa8.32□□□□□ -1.08
SMC4-225ENST00000497203 LCE2CQ5TA81 110 aa8.32□□□□□ -1.08
SMC4-225ENST00000497203 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
SMC4-225ENST00000497203 FOXC1Q12948 553 aa8.31□□□□□ -1.08
SMC4-225ENST00000497203 CTC1Q2NKJ3 1217 aa8.31□□□□□ -1.08
SMC4-225ENST00000497203 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
SMC4-225ENST00000497203 CD2BP2O95400 341 aaKnown RBP8.3□□□□□ -1.08
SMC4-225ENST00000497203 USP17L8P0C7I0 530 aa8.3□□□□□ -1.08
SMC4-225ENST00000497203 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
SMC4-225ENST00000497203 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
SMC4-225ENST00000497203 AXIN1O15169 862 aa8.29□□□□□ -1.08
SMC4-225ENST00000497203 TMEM259Q4ZIN3 620 aa8.29□□□□□ -1.08
SMC4-225ENST00000497203 SKOR1P84550 965 aa8.28□□□□□ -1.08
SMC4-225ENST00000497203 HMX1Q9NP08 348 aaPredicted RBP8.28□□□□□ -1.08
SMC4-225ENST00000497203 C11orf95C9JLR9 678 aaPredicted RBP8.27□□□□□ -1.09
SMC4-225ENST00000497203 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
SMC4-225ENST00000497203 BAP1Q92560 729 aa8.26□□□□□ -1.09
SMC4-225ENST00000497203 SH3BP2P78314 561 aa8.25□□□□□ -1.09
SMC4-225ENST00000497203 NR6A1Q15406 480 aa8.25□□□□□ -1.09
SMC4-225ENST00000497203 CYP4X1Q8N118 509 aa8.25□□□□□ -1.09
SMC4-225ENST00000497203 EPS8L1Q8TE68 723 aa8.25□□□□□ -1.09
SMC4-225ENST00000497203 WNT7BP56706 349 aa8.24□□□□□ -1.09
SMC4-225ENST00000497203 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
SMC4-225ENST00000497203 ZNF511Q8NB15 262 aa8.23□□□□□ -1.09
SMC4-225ENST00000497203 BANK1Q8NDB2 785 aa8.23□□□□□ -1.09
SMC4-225ENST00000497203 TRIM34Q9BYJ4 488 aa8.23□□□□□ -1.09
SMC4-225ENST00000497203 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
SMC4-225ENST00000497203 WNT7AO00755 349 aa8.22□□□□□ -1.09
SMC4-225ENST00000497203 MTMR14Q8NCE2 650 aa8.21□□□□□ -1.1
SMC4-225ENST00000497203 FOXJ1Q92949 421 aa8.21□□□□□ -1.1
SMC4-225ENST00000497203 GJD4Q96KN9 370 aaPredicted RBP8.21□□□□□ -1.1
SMC4-225ENST00000497203 MRGPRX2Q96LB1 330 aa8.21□□□□□ -1.1
SMC4-225ENST00000497203 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
SMC4-225ENST00000497203 FKBPLQ9UIM3 349 aa8.2□□□□□ -1.1
SMC4-225ENST00000497203 FAM181BA6NEQ2 426 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 SMPD1P17405 629 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 EHBP1Q8NDI1 1231 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 ATP13A2Q9NQ11 1180 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 TIMELESSQ9UNS1 1208 aa8.18□□□□□ -1.1
SMC4-225ENST00000497203 TTC24A2A3L6 582 aaPredicted RBP8.17□□□□□ -1.1
SMC4-225ENST00000497203 TERTO14746 1132 aaKnown RBP8.17□□□□□ -1.1
SMC4-225ENST00000497203 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
SMC4-225ENST00000497203 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
SMC4-225ENST00000497203 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
SMC4-225ENST00000497203 SOCS7O14512 581 aa8.16□□□□□ -1.1
SMC4-225ENST00000497203 SIAH2O43255 324 aa8.16□□□□□ -1.1
SMC4-225ENST00000497203 AGERQ15109 404 aa8.16□□□□□ -1.1
SMC4-225ENST00000497203 SH3RF1Q7Z6J0 888 aa8.16□□□□□ -1.1
SMC4-225ENST00000497203 GPKOWQ92917 476 aaPredicted RBP eCLIP8.16□□□□□ -1.1
SMC4-225ENST00000497203 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
SMC4-225ENST00000497203 VARSP26640 1264 aaKnown RBP8.15□□□□□ -1.1
SMC4-225ENST00000497203 PDXDC2PQ6P474 469 aa8.15□□□□□ -1.1
SMC4-225ENST00000497203 BPHLQ86WA6 291 aaPredicted RBP8.15□□□□□ -1.1
SMC4-225ENST00000497203 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
SMC4-225ENST00000497203 SENP2Q9HC62 589 aa8.15□□□□□ -1.1
SMC4-225ENST00000497203 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
SMC4-225ENST00000497203 GPR37L1O60883 481 aa8.14□□□□□ -1.11
SMC4-225ENST00000497203 MCM6Q14566 821 aa8.14□□□□□ -1.11
SMC4-225ENST00000497203 C14orf37Q86TY3 774 aa8.14□□□□□ -1.11
SMC4-225ENST00000497203 OCSTAMPQ9BR26 566 aa8.14□□□□□ -1.11
SMC4-225ENST00000497203 TLL2Q9Y6L7 1015 aa8.14□□□□□ -1.11
SMC4-225ENST00000497203 J3QL48 77 aa8.13□□□□□ -1.11
SMC4-225ENST00000497203 PNMA1Q8ND90 353 aa8.13□□□□□ -1.11
SMC4-225ENST00000497203 C1QTNF2Q9BXJ5 285 aa8.13□□□□□ -1.11
SMC4-225ENST00000497203 CARD14Q9BXL6 1004 aa8.13□□□□□ -1.11
SMC4-225ENST00000497203 FAM174AQ8TBP5 190 aa8.12□□□□□ -1.11
SMC4-225ENST00000497203 ARHGAP9Q9BRR9 750 aa8.12□□□□□ -1.11
SMC4-225ENST00000497203 TBC1D2BQ9UPU7 963 aa8.12□□□□□ -1.11
SMC4-225ENST00000497203 NDUFB9Q9Y6M9 179 aa8.12□□□□□ -1.11
SMC4-225ENST00000497203 ALDH1A1P00352 501 aa8.11□□□□□ -1.11
SMC4-225ENST00000497203 ERFEQ4G0M1 354 aa8.11□□□□□ -1.11
SMC4-225ENST00000497203 KIFC2Q96AC6 838 aa8.11□□□□□ -1.11
SMC4-225ENST00000497203 APBB1O00213 710 aa8.1□□□□□ -1.11
SMC4-225ENST00000497203 PTK2Q05397 1052 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms