RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
VPS36-206ENST00000497149 S1PR4O95977 384 aa9.47□□□□□ -0.89
VPS36-206ENST00000497149 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
VPS36-206ENST00000497149 PNMA1Q8ND90 353 aa9.47□□□□□ -0.89
VPS36-206ENST00000497149 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
VPS36-206ENST00000497149 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
VPS36-206ENST00000497149 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
VPS36-206ENST00000497149 WASHC4Q2M389 1173 aa9.44□□□□□ -0.9
VPS36-206ENST00000497149 LAPTM4AQ15012 233 aa9.43□□□□□ -0.9
VPS36-206ENST00000497149 PTCRAQ6ISU1 281 aaPredicted RBP9.43□□□□□ -0.9
VPS36-206ENST00000497149 ARMC2Q8NEN0 867 aa9.42□□□□□ -0.9
VPS36-206ENST00000497149 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
VPS36-206ENST00000497149 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
VPS36-206ENST00000497149 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
VPS36-206ENST00000497149 VAC14Q08AM6 782 aa9.41□□□□□ -0.9
VPS36-206ENST00000497149 V9GY48 417 aaPredicted RBP9.41□□□□□ -0.9
VPS36-206ENST00000497149 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.9
VPS36-206ENST00000497149 UNC93B1Q9H1C4 597 aa9.4□□□□□ -0.9
VPS36-206ENST00000497149 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
VPS36-206ENST00000497149 GGCXP38435 758 aa9.39□□□□□ -0.91
VPS36-206ENST00000497149 GPKOWQ92917 476 aaPredicted RBP eCLIP9.39□□□□□ -0.91
VPS36-206ENST00000497149 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
VPS36-206ENST00000497149 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
VPS36-206ENST00000497149 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.38□□□□□ -0.91
VPS36-206ENST00000497149 FBXO45P0C2W1 286 aa9.37□□□□□ -0.91
VPS36-206ENST00000497149 NR1H3Q13133 447 aa9.37□□□□□ -0.91
VPS36-206ENST00000497149 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
VPS36-206ENST00000497149 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
VPS36-206ENST00000497149 PPP1R18Q6NYC8 613 aa9.37□□□□□ -0.91
VPS36-206ENST00000497149 ANKLE1Q8NAG6 615 aa9.37□□□□□ -0.91
VPS36-206ENST00000497149 CCDC82Q8N4S0 544 aa9.36□□□□□ -0.91
VPS36-206ENST00000497149 GLMNQ92990 594 aa9.36□□□□□ -0.91
VPS36-206ENST00000497149 CALR3Q96L12 384 aaKnown RBP9.36□□□□□ -0.91
VPS36-206ENST00000497149 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
VPS36-206ENST00000497149 PTK2Q05397 1052 aa9.35□□□□□ -0.91
VPS36-206ENST00000497149 BAP1Q92560 729 aa9.35□□□□□ -0.91
VPS36-206ENST00000497149 ARID3AQ99856 593 aa9.35□□□□□ -0.91
VPS36-206ENST00000497149 ALG2Q9H553 416 aa9.35□□□□□ -0.91
VPS36-206ENST00000497149 SOX11P35716 441 aa9.34□□□□□ -0.91
VPS36-206ENST00000497149 EIF4G2P78344 907 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS36-206ENST00000497149 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
VPS36-206ENST00000497149 OCSTAMPQ9BR26 566 aa9.34□□□□□ -0.91
VPS36-206ENST00000497149 SERPINA10Q9UK55 444 aa9.34□□□□□ -0.91
VPS36-206ENST00000497149 ZBTB24O43167 697 aaPredicted RBP9.33□□□□□ -0.92
VPS36-206ENST00000497149 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
VPS36-206ENST00000497149 SEMA3FQ13275 785 aa9.32□□□□□ -0.92
VPS36-206ENST00000497149 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
VPS36-206ENST00000497149 CCDC97Q96F63 343 aaPredicted RBP9.32□□□□□ -0.92
VPS36-206ENST00000497149 PRKD2Q9BZL6 878 aa9.32□□□□□ -0.92
VPS36-206ENST00000497149 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
VPS36-206ENST00000497149 ZNF511Q8NB15 262 aa9.31□□□□□ -0.92
VPS36-206ENST00000497149 ARHGAP9Q9BRR9 750 aa9.31□□□□□ -0.92
VPS36-206ENST00000497149 SH3RF1Q7Z6J0 888 aa9.3□□□□□ -0.92
VPS36-206ENST00000497149 FOXJ1Q92949 421 aa9.3□□□□□ -0.92
VPS36-206ENST00000497149 NRG2O14511 850 aaPredicted RBP9.29□□□□□ -0.92
VPS36-206ENST00000497149 RPIAP49247 311 aa9.29□□□□□ -0.92
VPS36-206ENST00000497149 SH3BP2P78314 561 aa9.29□□□□□ -0.92
VPS36-206ENST00000497149 TRIM32Q13049 653 aa9.29□□□□□ -0.92
VPS36-206ENST00000497149 ZBTB33Q86T24 672 aa9.29□□□□□ -0.92
VPS36-206ENST00000497149 BPHLQ86WA6 291 aaPredicted RBP9.29□□□□□ -0.92
VPS36-206ENST00000497149 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
VPS36-206ENST00000497149 AGERQ15109 404 aa9.28□□□□□ -0.92
VPS36-206ENST00000497149 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.93
VPS36-206ENST00000497149 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.93
VPS36-206ENST00000497149 Q6ZNB5 142 aa9.27□□□□□ -0.93
VPS36-206ENST00000497149 MAGEB6P1A0A0J9YX57 407 aa9.26□□□□□ -0.93
VPS36-206ENST00000497149 CD2BP2O95400 341 aaKnown RBP9.26□□□□□ -0.93
VPS36-206ENST00000497149 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
VPS36-206ENST00000497149 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
VPS36-206ENST00000497149 CARD14Q9BXL6 1004 aa9.26□□□□□ -0.93
VPS36-206ENST00000497149 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
VPS36-206ENST00000497149 WNT7BP56706 349 aa9.25□□□□□ -0.93
VPS36-206ENST00000497149 SKOR1P84550 965 aa9.25□□□□□ -0.93
VPS36-206ENST00000497149 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
VPS36-206ENST00000497149 ARXQ96QS3 562 aa9.25□□□□□ -0.93
VPS36-206ENST00000497149 GFRA3O60609 400 aa9.24□□□□□ -0.93
VPS36-206ENST00000497149 ERFEQ4G0M1 354 aa9.24□□□□□ -0.93
VPS36-206ENST00000497149 UCN2Q96RP3 112 aa9.24□□□□□ -0.93
VPS36-206ENST00000497149 PPP1R12CQ9BZL4 782 aa9.24□□□□□ -0.93
VPS36-206ENST00000497149 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
VPS36-206ENST00000497149 DZIP3Q86Y13 1208 aaKnown RBP9.23□□□□□ -0.93
VPS36-206ENST00000497149 C1QTNF2Q9BXJ5 285 aa9.23□□□□□ -0.93
VPS36-206ENST00000497149 SLC19A1P41440 591 aa9.22□□□□□ -0.93
VPS36-206ENST00000497149 TFIP11Q9UBB9 837 aaKnown RBP9.22□□□□□ -0.93
VPS36-206ENST00000497149 PALM3A6NDB9 673 aaPredicted RBP9.21□□□□□ -0.94
VPS36-206ENST00000497149 VARSP26640 1264 aaKnown RBP9.21□□□□□ -0.94
VPS36-206ENST00000497149 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
VPS36-206ENST00000497149 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
VPS36-206ENST00000497149 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
VPS36-206ENST00000497149 TRMT44Q8IYL2 757 aaKnown RBP9.2□□□□□ -0.94
VPS36-206ENST00000497149 PHTF2Q8N3S3 785 aa9.2□□□□□ -0.94
VPS36-206ENST00000497149 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
VPS36-206ENST00000497149 SLFNL1Q499Z3 407 aa9.19□□□□□ -0.94
VPS36-206ENST00000497149 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
VPS36-206ENST00000497149 FAM174AQ8TBP5 190 aa9.19□□□□□ -0.94
VPS36-206ENST00000497149 SLC10A4Q96EP9 437 aa9.19□□□□□ -0.94
VPS36-206ENST00000497149 ATP9BO43861 1147 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 PRR20EP86478 221 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 PRR20CP86479 221 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 PRR20DP86480 221 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms