RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 SLIT2O94813 1529 aa12□□□□□ -0.49
SF1-219ENST00000496969 COL14A1Q05707 1796 aaKnown RBP12□□□□□ -0.49
SF1-219ENST00000496969 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
SF1-219ENST00000496969 EVC2Q86UK5 1308 aa11.99□□□□□ -0.49
SF1-219ENST00000496969 POLR3AO14802 1390 aaPredicted RBP11.99□□□□□ -0.49
SF1-219ENST00000496969 BCL9LQ86UU0 1499 aa11.98□□□□□ -0.49
SF1-219ENST00000496969 ACEP12821 1306 aa11.98□□□□□ -0.49
SF1-219ENST00000496969 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
SF1-219ENST00000496969 NRAPQ86VF7 1730 aa11.97□□□□□ -0.49
SF1-219ENST00000496969 UNC5CLQ8IV45 518 aa11.97□□□□□ -0.49
SF1-219ENST00000496969 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
SF1-219ENST00000496969 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
SF1-219ENST00000496969 NBPF8Q3BBV2 869 aa11.96□□□□□ -0.49
SF1-219ENST00000496969 GLI3P10071 1580 aa11.96□□□□□ -0.5
SF1-219ENST00000496969 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
SF1-219ENST00000496969 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
SF1-219ENST00000496969 ATAD2Q6PL18 1390 aa11.95□□□□□ -0.5
SF1-219ENST00000496969 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
SF1-219ENST00000496969 CCDC9Q9Y3X0 531 aaKnown RBP11.95□□□□□ -0.5
SF1-219ENST00000496969 NRKQ7Z2Y5 1582 aa11.95□□□□□ -0.5
SF1-219ENST00000496969 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
SF1-219ENST00000496969 ABTB2Q8N961 1025 aa11.93□□□□□ -0.5
SF1-219ENST00000496969 USP6P35125 1406 aa11.93□□□□□ -0.5
SF1-219ENST00000496969 VPS72Q15906 364 aa11.92□□□□□ -0.5
SF1-219ENST00000496969 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.52e-19■□□□□ 9
SF1-219ENST00000496969 PRDM11Q9NQV5 511 aa11.92□□□□□ -0.5
SF1-219ENST00000496969 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
SF1-219ENST00000496969 NUTM2GQ5VZR2 741 aa11.91□□□□□ -0.5
SF1-219ENST00000496969 BTG4Q9NY30 223 aa11.91□□□□□ -0.5
SF1-219ENST00000496969 CABP1Q9NZU7 370 aa11.91□□□□□ -0.5
SF1-219ENST00000496969 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
SF1-219ENST00000496969 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
SF1-219ENST00000496969 A0A0G2JS52 829 aa11.9□□□□□ -0.5
SF1-219ENST00000496969 FAM83GA6ND36 823 aa11.9□□□□□ -0.5
SF1-219ENST00000496969 MYT1Q01538 1121 aa11.9□□□□□ -0.5
SF1-219ENST00000496969 NLRP13Q86W25 1043 aa11.9□□□□□ -0.5
SF1-219ENST00000496969 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
SF1-219ENST00000496969 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
SF1-219ENST00000496969 BRWD3Q6RI45 1802 aa11.89□□□□□ -0.51
SF1-219ENST00000496969 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
SF1-219ENST00000496969 USP19O94966 1318 aa11.88□□□□□ -0.51
SF1-219ENST00000496969 SLIT3O75094 1523 aa11.88□□□□□ -0.51
SF1-219ENST00000496969 ZC3H6P61129 1189 aaKnown RBP11.88□□□□□ -0.51
SF1-219ENST00000496969 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
SF1-219ENST00000496969 KTN1Q86UP2 1357 aaKnown RBP11.87□□□□□ -0.51
SF1-219ENST00000496969 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
SF1-219ENST00000496969 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 NLRP6P59044 892 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
SF1-219ENST00000496969 SEPT12Q8IYM1 358 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 CPDO75976 1380 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
SF1-219ENST00000496969 ZBTB7CA1YPR0 619 aa11.85□□□□□ -0.51
SF1-219ENST00000496969 EVA1CP58658 441 aa11.85□□□□□ -0.51
SF1-219ENST00000496969 CPSF1Q10570 1443 aaKnown RBP11.85□□□□□ -0.51
SF1-219ENST00000496969 TTC21BQ7Z4L5 1316 aa11.85□□□□□ -0.51
SF1-219ENST00000496969 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
SF1-219ENST00000496969 THSD7AQ9UPZ6 1657 aa11.84□□□□□ -0.51
SF1-219ENST00000496969 USP47Q96K76 1375 aa11.84□□□□□ -0.51
SF1-219ENST00000496969 NINLQ9Y2I6 1382 aa11.84□□□□□ -0.51
SF1-219ENST00000496969 GCP02774 474 aa11.84□□□□□ -0.51
SF1-219ENST00000496969 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
SF1-219ENST00000496969 SPATA31A5Q5VU36 1347 aa11.84□□□□□ -0.51
SF1-219ENST00000496969 SPATA31A7Q8IWB4 1347 aa11.84□□□□□ -0.51
SF1-219ENST00000496969 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
SF1-219ENST00000496969 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
SF1-219ENST00000496969 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
SF1-219ENST00000496969 CCER1Q8TC90 406 aaPredicted RBP11.83□□□□□ -0.52
SF1-219ENST00000496969 PUS7Q96PZ0 661 aaKnown RBP11.83□□□□□ -0.52
SF1-219ENST00000496969 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
SF1-219ENST00000496969 CAMTA1Q9Y6Y1 1673 aa11.82□□□□□ -0.52
SF1-219ENST00000496969 ST20-MTHFSA0A0A6YYL1 179 aa11.82□□□□□ -0.52
SF1-219ENST00000496969 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
SF1-219ENST00000496969 SF3B2Q13435 895 aaKnown RBP11.82□□□□□ -0.52
SF1-219ENST00000496969 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
SF1-219ENST00000496969 EDC4Q6P2E9 1401 aaKnown RBP11.82□□□□□ -0.52
SF1-219ENST00000496969 RGPD1P0DJD0 1748 aa11.82□□□□□ -0.52
SF1-219ENST00000496969 SPATA31A1Q5TZJ5 1347 aa11.82□□□□□ -0.52
SF1-219ENST00000496969 COL5A2P05997 1499 aaPredicted RBP11.82□□□□□ -0.52
SF1-219ENST00000496969 TMF1P82094 1093 aa11.81□□□□□ -0.52
SF1-219ENST00000496969 CD163L1Q9NR16 1453 aa11.81□□□□□ -0.52
SF1-219ENST00000496969 ABCC6O95255 1503 aa11.81□□□□□ -0.52
SF1-219ENST00000496969 A0A1W2PP64 1363 aa11.8□□□□□ -0.52
SF1-219ENST00000496969 AATKQ6ZMQ8 1374 aa11.8□□□□□ -0.52
SF1-219ENST00000496969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.52
SF1-219ENST00000496969 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
SF1-219ENST00000496969 WNK3Q9BYP7 1800 aa11.8□□□□□ -0.52
SF1-219ENST00000496969 LTN1O94822 1766 aa11.79□□□□□ -0.52
SF1-219ENST00000496969 CRB1P82279 1406 aa11.79□□□□□ -0.52
SF1-219ENST00000496969 SOX12O15370 315 aa11.79□□□□□ -0.52
SF1-219ENST00000496969 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
SF1-219ENST00000496969 TESK2Q96S53 571 aa11.79□□□□□ -0.52
SF1-219ENST00000496969 PARP4Q9UKK3 1724 aaKnown RBP11.79□□□□□ -0.52
SF1-219ENST00000496969 NFAT5O94916 1531 aa11.79□□□□□ -0.52
SF1-219ENST00000496969 COL18A1P39060 1754 aa11.79□□□□□ -0.52
SF1-219ENST00000496969 LARP1Q6PKG0 1096 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms