RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 BRD4O60885 1362 aaPredicted RBP19.17■□□□□ 0.66
ATPAF2-208ENST00000496852 PHLPP1O60346 1717 aa19.16■□□□□ 0.66
ATPAF2-208ENST00000496852 NPHP3Q7Z494 1330 aa19.16■□□□□ 0.66
ATPAF2-208ENST00000496852 PSME1Q06323 249 aa19.14■□□□□ 0.66
ATPAF2-208ENST00000496852 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.66
ATPAF2-208ENST00000496852 KNSTRNQ9Y448 316 aa19.14■□□□□ 0.66
ATPAF2-208ENST00000496852 TTC21BQ7Z4L5 1316 aa19.14■□□□□ 0.65
ATPAF2-208ENST00000496852 AMER1Q5JTC6 1135 aaPredicted RBP19.13■□□□□ 0.65
ATPAF2-208ENST00000496852 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
ATPAF2-208ENST00000496852 NPC1L1Q9UHC9 1359 aa19.13■□□□□ 0.65
ATPAF2-208ENST00000496852 COL16A1Q07092 1604 aaPredicted RBP19.12■□□□□ 0.65
ATPAF2-208ENST00000496852 SOS2Q07890 1332 aaPredicted RBP19.12■□□□□ 0.65
ATPAF2-208ENST00000496852 TTC21AQ8NDW8 1320 aa19.12■□□□□ 0.65
ATPAF2-208ENST00000496852 PIP4K2BP78356 416 aa19.11■□□□□ 0.65
ATPAF2-208ENST00000496852 XPCQ01831 940 aaPredicted RBP19.11■□□□□ 0.65
ATPAF2-208ENST00000496852 CGNL1Q0VF96 1302 aa19.11■□□□□ 0.65
ATPAF2-208ENST00000496852 SBNO1A3KN83 1393 aa19.11■□□□□ 0.65
ATPAF2-208ENST00000496852 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
ATPAF2-208ENST00000496852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
ATPAF2-208ENST00000496852 NSD2O96028 1365 aa19.09■□□□□ 0.65
ATPAF2-208ENST00000496852 FYB1O15117 783 aa19.09■□□□□ 0.65
ATPAF2-208ENST00000496852 MAP2P11137 1827 aaKnown RBP19.09■□□□□ 0.65
ATPAF2-208ENST00000496852 TNS3Q68CZ2 1445 aa19.08■□□□□ 0.64
ATPAF2-208ENST00000496852 NME9Q86XW9 330 aa19.08■□□□□ 0.64
ATPAF2-208ENST00000496852 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
ATPAF2-208ENST00000496852 ABCA3Q99758 1704 aa19.07■□□□□ 0.64
ATPAF2-208ENST00000496852 OVOS2A0A0J9YW53 1432 aa19.07■□□□□ 0.64
ATPAF2-208ENST00000496852 OVOS2Q6IE36 1432 aa19.07■□□□□ 0.64
ATPAF2-208ENST00000496852 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
ATPAF2-208ENST00000496852 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
ATPAF2-208ENST00000496852 SPATA31A3Q5VYP0 1347 aa19.06■□□□□ 0.64
ATPAF2-208ENST00000496852 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
ATPAF2-208ENST00000496852 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
ATPAF2-208ENST00000496852 GGNBP2Q9H3C7 697 aa19.05■□□□□ 0.64
ATPAF2-208ENST00000496852 MED1Q15648 1581 aaPredicted RBP19.05■□□□□ 0.64
ATPAF2-208ENST00000496852 COL22A1Q8NFW1 1626 aaPredicted RBP19.05■□□□□ 0.64
ATPAF2-208ENST00000496852 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
ATPAF2-208ENST00000496852 PARD3Q8TEW0 1356 aa19.04■□□□□ 0.64
ATPAF2-208ENST00000496852 ABTB2Q8N961 1025 aa19.04■□□□□ 0.64
ATPAF2-208ENST00000496852 SHPRHQ149N8 1683 aa19.03■□□□□ 0.64
ATPAF2-208ENST00000496852 SLIT3O75094 1523 aa19.02■□□□□ 0.64
ATPAF2-208ENST00000496852 LTN1O94822 1766 aa19.02■□□□□ 0.64
ATPAF2-208ENST00000496852 PRKRIP1Q9H875 184 aaPredicted RBP19.02■□□□□ 0.64
ATPAF2-208ENST00000496852 ARHGEF10O15013 1369 aa19.02■□□□□ 0.63
ATPAF2-208ENST00000496852 CNGB1Q14028 1251 aaPredicted RBP19.01■□□□□ 0.63
ATPAF2-208ENST00000496852 NLRP6P59044 892 aa19.01■□□□□ 0.63
ATPAF2-208ENST00000496852 NUTM2GQ5VZR2 741 aa19■□□□□ 0.63
ATPAF2-208ENST00000496852 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
ATPAF2-208ENST00000496852 COG3Q96JB2 828 aa19■□□□□ 0.63
ATPAF2-208ENST00000496852 ANP32CO43423 234 aa18.99■□□□□ 0.63
ATPAF2-208ENST00000496852 NLRP13Q86W25 1043 aa18.99■□□□□ 0.63
ATPAF2-208ENST00000496852 USP19O94966 1318 aa18.99■□□□□ 0.63
ATPAF2-208ENST00000496852 RALBP1Q15311 655 aa18.98■□□□□ 0.63
ATPAF2-208ENST00000496852 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
ATPAF2-208ENST00000496852 MORC1Q86VD1 984 aa18.98■□□□□ 0.63
ATPAF2-208ENST00000496852 NFAT5O94916 1531 aa18.98■□□□□ 0.63
ATPAF2-208ENST00000496852 PNPLA6Q8IY17 1366 aa18.96■□□□□ 0.63
ATPAF2-208ENST00000496852 AATKQ6ZMQ8 1374 aa18.94■□□□□ 0.62
ATPAF2-208ENST00000496852 RGPD5Q99666 1765 aa18.94■□□□□ 0.62
ATPAF2-208ENST00000496852 PEAK1Q9H792 1746 aa18.94■□□□□ 0.62
ATPAF2-208ENST00000496852 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
ATPAF2-208ENST00000496852 HSPA1LP34931 641 aa18.92■□□□□ 0.62
ATPAF2-208ENST00000496852 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
ATPAF2-208ENST00000496852 MIER1Q8N108 512 aa18.92■□□□□ 0.62
ATPAF2-208ENST00000496852 PPP2R1AP30153 589 aa18.92■□□□□ 0.62
ATPAF2-208ENST00000496852 KCNH5Q8NCM2 988 aa18.92■□□□□ 0.62
ATPAF2-208ENST00000496852 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
ATPAF2-208ENST00000496852 COL18A1P39060 1754 aa18.91■□□□□ 0.62
ATPAF2-208ENST00000496852 GCP02774 474 aa18.91■□□□□ 0.62
ATPAF2-208ENST00000496852 FBLN1P23142 703 aa18.91■□□□□ 0.62
ATPAF2-208ENST00000496852 CABLES1Q8TDN4 633 aa18.91■□□□□ 0.62
ATPAF2-208ENST00000496852 JCADQ9P266 1359 aa18.9■□□□□ 0.62
ATPAF2-208ENST00000496852 FBXO41Q8TF61 875 aa18.9■□□□□ 0.62
ATPAF2-208ENST00000496852 SOX12O15370 315 aa18.89■□□□□ 0.61
ATPAF2-208ENST00000496852 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
ATPAF2-208ENST00000496852 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
ATPAF2-208ENST00000496852 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
ATPAF2-208ENST00000496852 CDK12Q9NYV4 1490 aaPredicted RBP18.86■□□□□ 0.61
ATPAF2-208ENST00000496852 MAP3K19Q56UN5 1328 aa18.86■□□□□ 0.61
ATPAF2-208ENST00000496852 ABCC6O95255 1503 aa18.86■□□□□ 0.61
ATPAF2-208ENST00000496852 EMILIN1Q9Y6C2 1016 aa18.85■□□□□ 0.61
ATPAF2-208ENST00000496852 LMO7Q8WWI1 1683 aa18.85■□□□□ 0.61
ATPAF2-208ENST00000496852 CPDO75976 1380 aa18.85■□□□□ 0.61
ATPAF2-208ENST00000496852 MTHFSP49914 203 aa18.85■□□□□ 0.61
ATPAF2-208ENST00000496852 ARHGEF25Q86VW2 580 aa18.85■□□□□ 0.61
ATPAF2-208ENST00000496852 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
ATPAF2-208ENST00000496852 COL14A1Q05707 1796 aaKnown RBP18.84■□□□□ 0.61
ATPAF2-208ENST00000496852 COL3A1P02461 1466 aaPredicted RBP18.84■□□□□ 0.61
ATPAF2-208ENST00000496852 PLCH1Q4KWH8 1693 aa18.84■□□□□ 0.61
ATPAF2-208ENST00000496852 RGPD2P0DJD1 1756 aa18.83■□□□□ 0.61
ATPAF2-208ENST00000496852 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 HAP1P54257 671 aaPredicted RBP18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 ZC3H6P61129 1189 aaKnown RBP18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 INSRP06213 1382 aa18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 FLT4P35916 1363 aa18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
ATPAF2-208ENST00000496852 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms