RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
LMNA-216ENST00000496738 ESCO1Q5FWF5 840 aa22.72■■□□□ 1.23
LMNA-216ENST00000496738 C19orf44Q9H6X5 657 aa22.72■■□□□ 1.23
LMNA-216ENST00000496738 HNRNPUQ00839 825 aaKnown RBP eCLIP22.71■■□□□ 1.23
LMNA-216ENST00000496738 POLR3AO14802 1390 aaPredicted RBP22.71■■□□□ 1.23
LMNA-216ENST00000496738 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
LMNA-216ENST00000496738 PHF8Q9UPP1 1060 aa22.7■■□□□ 1.22
LMNA-216ENST00000496738 TTC21BQ7Z4L5 1316 aa22.7■■□□□ 1.22
LMNA-216ENST00000496738 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
LMNA-216ENST00000496738 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
LMNA-216ENST00000496738 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
LMNA-216ENST00000496738 LRRC7Q96NW7 1537 aa22.67■■□□□ 1.22
LMNA-216ENST00000496738 ATF3P18847 181 aa22.67■■□□□ 1.22
LMNA-216ENST00000496738 FBLN1P23142 703 aa22.67■■□□□ 1.22
LMNA-216ENST00000496738 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
LMNA-216ENST00000496738 MTHFSP49914 203 aa22.67■■□□□ 1.22
LMNA-216ENST00000496738 SSH2Q76I76 1423 aa22.65■■□□□ 1.22
LMNA-216ENST00000496738 COG3Q96JB2 828 aa22.65■■□□□ 1.22
LMNA-216ENST00000496738 C1orf167Q5SNV9 1468 aa22.64■■□□□ 1.22
LMNA-216ENST00000496738 NCOA3Q9Y6Q9 1424 aa22.64■■□□□ 1.22
LMNA-216ENST00000496738 MSH6P52701 1360 aa22.64■■□□□ 1.22
LMNA-216ENST00000496738 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
LMNA-216ENST00000496738 MST1RQ04912 1400 aa22.62■■□□□ 1.21
LMNA-216ENST00000496738 XPCQ01831 940 aaPredicted RBP22.61■■□□□ 1.21
LMNA-216ENST00000496738 WDR43Q15061 677 aaKnown RBP eCLIP22.61■■□□□ 1.21
LMNA-216ENST00000496738 DCCP43146 1447 aa22.61■■□□□ 1.21
LMNA-216ENST00000496738 FOXO3O43524 673 aa22.6■■□□□ 1.21
LMNA-216ENST00000496738 PSME1Q06323 249 aa22.6■■□□□ 1.21
LMNA-216ENST00000496738 NUTM2GQ5VZR2 741 aa22.6■■□□□ 1.21
LMNA-216ENST00000496738 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
LMNA-216ENST00000496738 TTC21AQ8NDW8 1320 aa22.6■■□□□ 1.21
LMNA-216ENST00000496738 CADPS2Q86UW7 1296 aa22.59■■□□□ 1.21
LMNA-216ENST00000496738 PIK3C2AO00443 1686 aa22.59■■□□□ 1.21
LMNA-216ENST00000496738 PPM1GO15355 546 aaPredicted RBP22.59■■□□□ 1.21
LMNA-216ENST00000496738 SOX12O15370 315 aa22.59■■□□□ 1.21
LMNA-216ENST00000496738 OVOS2A0A0J9YW53 1432 aa22.58■■□□□ 1.2
LMNA-216ENST00000496738 OVOS2Q6IE36 1432 aa22.58■■□□□ 1.2
LMNA-216ENST00000496738 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
LMNA-216ENST00000496738 SHPRHQ149N8 1683 aa22.56■■□□□ 1.2
LMNA-216ENST00000496738 RRS1Q15050 365 aaKnown RBP22.56■■□□□ 1.2
LMNA-216ENST00000496738 POLKQ9UBT6 870 aa22.56■■□□□ 1.2
LMNA-216ENST00000496738 EMILIN1Q9Y6C2 1016 aa22.56■■□□□ 1.2
LMNA-216ENST00000496738 DDX17Q92841 729 aaKnown RBP22.55■■□□□ 1.2
LMNA-216ENST00000496738 KIF1AQ12756 1690 aa22.55■■□□□ 1.2
LMNA-216ENST00000496738 ABTB2Q8N961 1025 aa22.55■■□□□ 1.2
LMNA-216ENST00000496738 MAP2P11137 1827 aaKnown RBP22.54■■□□□ 1.2
LMNA-216ENST00000496738 NLRP6P59044 892 aa22.54■■□□□ 1.2
LMNA-216ENST00000496738 BLMP54132 1417 aaPredicted RBP22.52■■□□□ 1.2
LMNA-216ENST00000496738 SALL2Q9Y467 1007 aaPredicted RBP22.52■■□□□ 1.2
LMNA-216ENST00000496738 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
LMNA-216ENST00000496738 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
LMNA-216ENST00000496738 COL3A1P02461 1466 aaPredicted RBP22.51■■□□□ 1.19
LMNA-216ENST00000496738 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
LMNA-216ENST00000496738 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
LMNA-216ENST00000496738 KRT28Q7Z3Y7 464 aa22.5■■□□□ 1.19
LMNA-216ENST00000496738 MARF1Q9Y4F3 1742 aaKnown RBP22.5■■□□□ 1.19
LMNA-216ENST00000496738 LMOD2Q6P5Q4 547 aa22.49■■□□□ 1.19
LMNA-216ENST00000496738 ZBED9Q6R2W3 1325 aa22.49■■□□□ 1.19
LMNA-216ENST00000496738 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
LMNA-216ENST00000496738 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
LMNA-216ENST00000496738 SLAIN2Q9P270 581 aa22.47■■□□□ 1.19
LMNA-216ENST00000496738 TRPM3Q9HCF6 1732 aaPredicted RBP22.47■■□□□ 1.19
LMNA-216ENST00000496738 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
LMNA-216ENST00000496738 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
LMNA-216ENST00000496738 PNPLA6Q8IY17 1366 aa22.46■■□□□ 1.19
LMNA-216ENST00000496738 U2AF1L5P0DN76 240 aaPredicted RBP22.46■■□□□ 1.19
LMNA-216ENST00000496738 U2AF1Q01081 240 aaKnown RBP eCLIP22.46■■□□□ 1.19
LMNA-216ENST00000496738 DIAPH1O60610 1272 aaKnown RBP22.45■■□□□ 1.18
LMNA-216ENST00000496738 CDK12Q9NYV4 1490 aaPredicted RBP22.45■■□□□ 1.18
LMNA-216ENST00000496738 LTBP4Q8N2S1 1624 aa22.45■■□□□ 1.18
LMNA-216ENST00000496738 INSRP06213 1382 aa22.44■■□□□ 1.18
LMNA-216ENST00000496738 PEAK1Q9H792 1746 aa22.43■■□□□ 1.18
LMNA-216ENST00000496738 USP54Q70EL1 1684 aa22.43■■□□□ 1.18
LMNA-216ENST00000496738 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
LMNA-216ENST00000496738 MAP3K19Q56UN5 1328 aa22.42■■□□□ 1.18
LMNA-216ENST00000496738 NPHP3Q7Z494 1330 aa22.42■■□□□ 1.18
LMNA-216ENST00000496738 PXDNQ92626 1479 aa22.39■■□□□ 1.17
LMNA-216ENST00000496738 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
LMNA-216ENST00000496738 APAF1O14727 1248 aa22.38■■□□□ 1.17
LMNA-216ENST00000496738 HSP90AB2PQ58FF8 381 aa22.38■■□□□ 1.17
LMNA-216ENST00000496738 ALS2Q96Q42 1657 aa22.38■■□□□ 1.17
LMNA-216ENST00000496738 IL13P35225 146 aa22.37■■□□□ 1.17
LMNA-216ENST00000496738 AMPHP49418 695 aa22.37■■□□□ 1.17
LMNA-216ENST00000496738 SBNO1A3KN83 1393 aa22.35■■□□□ 1.17
LMNA-216ENST00000496738 NFAT5O94916 1531 aa22.35■■□□□ 1.17
LMNA-216ENST00000496738 RUNDC1Q96C34 613 aa22.35■■□□□ 1.17
LMNA-216ENST00000496738 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
LMNA-216ENST00000496738 HMOX1P09601 288 aa22.35■■□□□ 1.17
LMNA-216ENST00000496738 EIF4A2Q14240 407 aaKnown RBP22.35■■□□□ 1.17
LMNA-216ENST00000496738 TNS3Q68CZ2 1445 aa22.34■■□□□ 1.17
LMNA-216ENST00000496738 RRP7AQ9Y3A4 280 aaKnown RBP22.34■■□□□ 1.17
LMNA-216ENST00000496738 FLT4P35916 1363 aa22.34■■□□□ 1.17
LMNA-216ENST00000496738 LTN1O94822 1766 aa22.34■■□□□ 1.17
LMNA-216ENST00000496738 NEUROD2Q15784 382 aa22.32■■□□□ 1.16
LMNA-216ENST00000496738 SLIT3O75094 1523 aa22.32■■□□□ 1.16
LMNA-216ENST00000496738 GCP02774 474 aa22.32■■□□□ 1.16
LMNA-216ENST00000496738 KCNH5Q8NCM2 988 aa22.32■■□□□ 1.16
LMNA-216ENST00000496738 USP19O94966 1318 aa22.32■■□□□ 1.16
LMNA-216ENST00000496738 MED1Q15648 1581 aaPredicted RBP22.32■■□□□ 1.16
LMNA-216ENST00000496738 TCP11L2Q8N4U5 519 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms