RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 DNAAF4Q8WXU2 420 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 TRIM21P19474 475 aaKnown RBP9.72□□□□□ -0.85
NPHP1-211ENST00000496524 HMGB1P1B2RPK0 211 aaPredicted RBP9.72□□□□□ -0.85
NPHP1-211ENST00000496524 ANKRD1Q15327 319 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 GRPEL1Q9HAV7 217 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 IVLP07476 585 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 KIF18AQ8NI77 898 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 GRIPAP1Q4V328 841 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 TAF4BQ92750 862 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 VPS37DQ86XT2 251 aa9.71□□□□□ -0.85
NPHP1-211ENST00000496524 DNAI2Q9GZS0 605 aa9.71□□□□□ -0.85
NPHP1-211ENST00000496524 PAIP2Q9BPZ3 127 aaKnown RBP9.71□□□□□ -0.85
NPHP1-211ENST00000496524 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.85
NPHP1-211ENST00000496524 FAM193AP78312 1265 aa9.71□□□□□ -0.85
NPHP1-211ENST00000496524 IPO4Q8TEX9 1081 aaKnown RBP9.71□□□□□ -0.85
NPHP1-211ENST00000496524 MNAT1P51948 309 aa9.71□□□□□ -0.86
NPHP1-211ENST00000496524 G3BP1Q13283 466 aaKnown RBP eCLIP9.71□□□□□ -0.86
NPHP1-211ENST00000496524 CCDC83Q8IWF9 413 aa9.71□□□□□ -0.86
NPHP1-211ENST00000496524 SPC24Q8NBT2 197 aa9.71□□□□□ -0.86
NPHP1-211ENST00000496524 TAOK3Q9H2K8 898 aa9.71□□□□□ -0.86
NPHP1-211ENST00000496524 CPSF2Q9P2I0 782 aaKnown RBP9.71□□□□□ -0.86
NPHP1-211ENST00000496524 BRPF1P55201 1214 aaPredicted RBP9.71□□□□□ -0.86
NPHP1-211ENST00000496524 TMCO5BA8MYB1 307 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 ZSCAN30Q86W11 494 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 EPB41L2O43491 1005 aaKnown RBP9.7□□□□□ -0.86
NPHP1-211ENST00000496524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.7□□□□□ -0.86
NPHP1-211ENST00000496524 UBE2Q2Q8WVN8 375 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 CLGNO14967 610 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 CDC45O75419 566 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
NPHP1-211ENST00000496524 DDX12PQ92771 950 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 CRBNQ96SW2 442 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 KIF3CO14782 793 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 CNTROBQ8N137 903 aa9.7□□□□□ -0.86
NPHP1-211ENST00000496524 TNMDQ9H2S6 317 aa9.69□□□□□ -0.86
NPHP1-211ENST00000496524 RAD21O60216 631 aa9.69□□□□□ -0.86
NPHP1-211ENST00000496524 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
NPHP1-211ENST00000496524 POTEJP0CG39 1038 aa9.69□□□□□ -0.86
NPHP1-211ENST00000496524 PTPN14Q15678 1187 aa9.69□□□□□ -0.86
NPHP1-211ENST00000496524 NAA15Q9BXJ9 866 aaKnown RBP9.69□□□□□ -0.86
NPHP1-211ENST00000496524 ARHGAP29Q52LW3 1261 aa9.69□□□□□ -0.86
NPHP1-211ENST00000496524 AMPHP49418 695 aa9.68□□□□□ -0.86
NPHP1-211ENST00000496524 ZWINTO95229 277 aa9.68□□□□□ -0.86
NPHP1-211ENST00000496524 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
NPHP1-211ENST00000496524 HSPA4P34932 840 aa9.68□□□□□ -0.86
NPHP1-211ENST00000496524 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
NPHP1-211ENST00000496524 KIF5CO60282 957 aa9.68□□□□□ -0.86
NPHP1-211ENST00000496524 CASQ1P31415 396 aa9.68□□□□□ -0.86
NPHP1-211ENST00000496524 KRT85P78386 507 aa9.68□□□□□ -0.86
NPHP1-211ENST00000496524 SLC3A2P08195 630 aaKnown RBP9.68□□□□□ -0.86
NPHP1-211ENST00000496524 IFFO1Q0D2I5 559 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 CCDC6Q16204 474 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 C1orf141Q5JVX7 400 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 ERC1Q8IUD2 1116 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 RNF187Q5TA31 235 aaPredicted RBP9.67□□□□□ -0.86
NPHP1-211ENST00000496524 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 GOLGA6L9A6NEM1 432 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 ARHGAP35Q9NRY4 1499 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 KRT18P05783 430 aaKnown RBP9.67□□□□□ -0.86
NPHP1-211ENST00000496524 ANAPC15P60006 121 aa9.67□□□□□ -0.86
NPHP1-211ENST00000496524 STK38Q15208 465 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 NEMFO60524 1076 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 FERP16591 822 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
NPHP1-211ENST00000496524 ANKRD30AQ9BXX3 1397 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 NOL3O60936 208 aaKnown RBP9.66□□□□□ -0.86
NPHP1-211ENST00000496524 CEP57L1Q8IYX8 460 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
NPHP1-211ENST00000496524 KIF27Q86VH2 1401 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 NEBLO76041 1014 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 TMEM132AQ24JP5 1023 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 NAP1L3Q99457 506 aaPredicted RBP9.66□□□□□ -0.86
NPHP1-211ENST00000496524 CEP83Q9Y592 693 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 PAFAH1B1P43034 410 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 RBM28Q9NW13 759 aaKnown RBP9.66□□□□□ -0.86
NPHP1-211ENST00000496524 ZFYP08048 801 aaPredicted RBP9.66□□□□□ -0.86
NPHP1-211ENST00000496524 CBX1P83916 185 aa9.66□□□□□ -0.86
NPHP1-211ENST00000496524 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
NPHP1-211ENST00000496524 MCM5P33992 734 aa9.65□□□□□ -0.86
NPHP1-211ENST00000496524 FAM177A1Q8N128 213 aaPredicted RBP9.65□□□□□ -0.86
NPHP1-211ENST00000496524 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
NPHP1-211ENST00000496524 DYNC1I1O14576 645 aa9.65□□□□□ -0.86
NPHP1-211ENST00000496524 EXOC6Q8TAG9 804 aa9.65□□□□□ -0.86
NPHP1-211ENST00000496524 HOOK3Q86VS8 718 aa9.65□□□□□ -0.86
NPHP1-211ENST00000496524 TANGO6Q9C0B7 1094 aa9.65□□□□□ -0.86
NPHP1-211ENST00000496524 COG6Q9Y2V7 657 aa9.65□□□□□ -0.86
NPHP1-211ENST00000496524 SREK1Q8WXA9 508 aaKnown RBP9.65□□□□□ -0.86
NPHP1-211ENST00000496524 TDO2P48775 406 aa9.65□□□□□ -0.87
NPHP1-211ENST00000496524 CCDC113Q9H0I3 377 aa9.65□□□□□ -0.87
NPHP1-211ENST00000496524 TUBB4BP68371 445 aa9.65□□□□□ -0.87
NPHP1-211ENST00000496524 SPA17Q15506 151 aa9.64□□□□□ -0.87
NPHP1-211ENST00000496524 VPS36Q86VN1 386 aa9.64□□□□□ -0.87
NPHP1-211ENST00000496524 NBPF1Q3BBV0 1214 aa9.64□□□□□ -0.87
NPHP1-211ENST00000496524 FBF1Q8TES7 1133 aa9.64□□□□□ -0.87
NPHP1-211ENST00000496524 BRPF3Q9ULD4 1205 aa9.64□□□□□ -0.87
NPHP1-211ENST00000496524 TEFQ10587 303 aa9.64□□□□□ -0.87
NPHP1-211ENST00000496524 MAPK8IP2Q13387 824 aaPredicted RBP9.64□□□□□ -0.87
NPHP1-211ENST00000496524 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
NPHP1-211ENST00000496524 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms