RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NGDNQ8NEJ9 315 aaKnown RBP20.62■□□□□ 0.89
VTI1A-209ENST00000496445 GJD4Q96KN9 370 aaPredicted RBP20.62■□□□□ 0.89
VTI1A-209ENST00000496445 POLR3AO14802 1390 aaPredicted RBP20.61■□□□□ 0.89
VTI1A-209ENST00000496445 CENPJQ9HC77 1338 aaPredicted RBP20.61■□□□□ 0.89
VTI1A-209ENST00000496445 ATAD2Q6PL18 1390 aa20.6■□□□□ 0.89
VTI1A-209ENST00000496445 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
VTI1A-209ENST00000496445 FAM83GA6ND36 823 aa20.57■□□□□ 0.88
VTI1A-209ENST00000496445 ADRA2BP18089 450 aa20.57■□□□□ 0.88
VTI1A-209ENST00000496445 ACEP12821 1306 aa20.56■□□□□ 0.88
VTI1A-209ENST00000496445 NRKQ7Z2Y5 1582 aa20.56■□□□□ 0.88
VTI1A-209ENST00000496445 PPIP5K1Q6PFW1 1433 aa20.56■□□□□ 0.88
VTI1A-209ENST00000496445 PAK3O75914 559 aaPredicted RBP20.56■□□□□ 0.88
VTI1A-209ENST00000496445 VPS72Q15906 364 aa20.56■□□□□ 0.88
VTI1A-209ENST00000496445 CCDC61Q9Y6R9 512 aa20.56■□□□□ 0.88
VTI1A-209ENST00000496445 PLEKHG3A1L390 1219 aa20.55■□□□□ 0.88
VTI1A-209ENST00000496445 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
VTI1A-209ENST00000496445 NBPF8Q3BBV2 869 aa20.53■□□□□ 0.88
VTI1A-209ENST00000496445 CABP2Q9NPB3 220 aa20.53■□□□□ 0.88
VTI1A-209ENST00000496445 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
VTI1A-209ENST00000496445 BTG4Q9NY30 223 aa20.51■□□□□ 0.87
VTI1A-209ENST00000496445 AKAP12Q02952 1782 aa20.49■□□□□ 0.87
VTI1A-209ENST00000496445 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
VTI1A-209ENST00000496445 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
VTI1A-209ENST00000496445 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
VTI1A-209ENST00000496445 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
VTI1A-209ENST00000496445 SEPT12Q8IYM1 358 aa20.48■□□□□ 0.87
VTI1A-209ENST00000496445 PIK3C2AO00443 1686 aa20.48■□□□□ 0.87
VTI1A-209ENST00000496445 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
VTI1A-209ENST00000496445 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
VTI1A-209ENST00000496445 USP6P35125 1406 aa20.46■□□□□ 0.87
VTI1A-209ENST00000496445 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
VTI1A-209ENST00000496445 PRDM11Q9NQV5 511 aa20.46■□□□□ 0.87
VTI1A-209ENST00000496445 USP19O94966 1318 aa20.46■□□□□ 0.87
VTI1A-209ENST00000496445 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
VTI1A-209ENST00000496445 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
VTI1A-209ENST00000496445 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
VTI1A-209ENST00000496445 TONSLQ96HA7 1378 aa20.44■□□□□ 0.86
VTI1A-209ENST00000496445 SRCAPQ6ZRS2 3230 aa20.43■□□□□ 0.86
VTI1A-209ENST00000496445 CHRNA2Q15822 529 aa20.43■□□□□ 0.86
VTI1A-209ENST00000496445 CABP1Q9NZU7 370 aa20.43■□□□□ 0.86
VTI1A-209ENST00000496445 SPATA31A5Q5VU36 1347 aa20.43■□□□□ 0.86
VTI1A-209ENST00000496445 SPATA31A7Q8IWB4 1347 aa20.43■□□□□ 0.86
VTI1A-209ENST00000496445 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
VTI1A-209ENST00000496445 SLIT3O75094 1523 aa20.43■□□□□ 0.86
VTI1A-209ENST00000496445 MON2Q7Z3U7 1717 aa20.42■□□□□ 0.86
VTI1A-209ENST00000496445 ZC3H6P61129 1189 aaKnown RBP20.42■□□□□ 0.86
VTI1A-209ENST00000496445 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
VTI1A-209ENST00000496445 ABTB2Q8N961 1025 aa20.42■□□□□ 0.86
VTI1A-209ENST00000496445 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
VTI1A-209ENST00000496445 CAMTA1Q9Y6Y1 1673 aa20.42■□□□□ 0.86
VTI1A-209ENST00000496445 CPDO75976 1380 aa20.41■□□□□ 0.86
VTI1A-209ENST00000496445 BLMP54132 1417 aaPredicted RBP20.41■□□□□ 0.86
VTI1A-209ENST00000496445 KRT27Q7Z3Y8 459 aa20.39■□□□□ 0.85
VTI1A-209ENST00000496445 CCDC125Q86Z20 511 aa20.38■□□□□ 0.85
VTI1A-209ENST00000496445 SPATA31A1Q5TZJ5 1347 aa20.37■□□□□ 0.85
VTI1A-209ENST00000496445 CARD11Q9BXL7 1154 aa20.37■□□□□ 0.85
VTI1A-209ENST00000496445 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
VTI1A-209ENST00000496445 COL18A1P39060 1754 aa20.36■□□□□ 0.85
VTI1A-209ENST00000496445 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
VTI1A-209ENST00000496445 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
VTI1A-209ENST00000496445 TNS1Q9HBL0 1735 aaKnown RBP20.36■□□□□ 0.85
VTI1A-209ENST00000496445 A0A0G2JS52 829 aa20.35■□□□□ 0.85
VTI1A-209ENST00000496445 GCP02774 474 aa20.35■□□□□ 0.85
VTI1A-209ENST00000496445 MYT1Q01538 1121 aa20.35■□□□□ 0.85
VTI1A-209ENST00000496445 STRN4Q9NRL3 753 aa20.35■□□□□ 0.85
VTI1A-209ENST00000496445 COL5A2P05997 1499 aaPredicted RBP20.35■□□□□ 0.85
VTI1A-209ENST00000496445 USP54Q70EL1 1684 aa20.35■□□□□ 0.85
VTI1A-209ENST00000496445 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
VTI1A-209ENST00000496445 WNK3Q9BYP7 1800 aa20.32■□□□□ 0.84
VTI1A-209ENST00000496445 TTC21BQ7Z4L5 1316 aa20.32■□□□□ 0.84
VTI1A-209ENST00000496445 RGPD5Q99666 1765 aa20.31■□□□□ 0.84
VTI1A-209ENST00000496445 PARP4Q9UKK3 1724 aaKnown RBP20.31■□□□□ 0.84
VTI1A-209ENST00000496445 NLRP6P59044 892 aa20.31■□□□□ 0.84
VTI1A-209ENST00000496445 NFAT5O94916 1531 aa20.31■□□□□ 0.84
VTI1A-209ENST00000496445 DEFB132Q7Z7B7 95 aa20.3■□□□□ 0.84
VTI1A-209ENST00000496445 LARP1Q6PKG0 1096 aaKnown RBP20.29■□□□□ 0.84
VTI1A-209ENST00000496445 ZNF692Q9BU19 519 aaPredicted RBP20.29■□□□□ 0.84
VTI1A-209ENST00000496445 KTN1Q86UP2 1357 aaKnown RBP20.29■□□□□ 0.84
VTI1A-209ENST00000496445 FAM182BQ5T319 152 aa20.28■□□□□ 0.84
VTI1A-209ENST00000496445 AATKQ6ZMQ8 1374 aa20.28■□□□□ 0.84
VTI1A-209ENST00000496445 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.84
VTI1A-209ENST00000496445 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
VTI1A-209ENST00000496445 LRRC37A3O60309 1634 aa20.27■□□□□ 0.83
VTI1A-209ENST00000496445 MSH5O43196 834 aa20.26■□□□□ 0.83
VTI1A-209ENST00000496445 EVA1CP58658 441 aa20.26■□□□□ 0.83
VTI1A-209ENST00000496445 BARGINQ6ZT62 677 aa20.26■□□□□ 0.83
VTI1A-209ENST00000496445 ZBTB7CA1YPR0 619 aa20.25■□□□□ 0.83
VTI1A-209ENST00000496445 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
VTI1A-209ENST00000496445 CRB1P82279 1406 aa20.25■□□□□ 0.83
VTI1A-209ENST00000496445 LTN1O94822 1766 aa20.24■□□□□ 0.83
VTI1A-209ENST00000496445 TESK2Q96S53 571 aa20.24■□□□□ 0.83
VTI1A-209ENST00000496445 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
VTI1A-209ENST00000496445 ABCC6O95255 1503 aa20.23■□□□□ 0.83
VTI1A-209ENST00000496445 TCP11L2Q8N4U5 519 aa20.23■□□□□ 0.83
VTI1A-209ENST00000496445 A0A1W2PP64 1363 aa20.22■□□□□ 0.83
VTI1A-209ENST00000496445 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
VTI1A-209ENST00000496445 DISP2A7MBM2 1401 aa20.22■□□□□ 0.83
VTI1A-209ENST00000496445 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
VTI1A-209ENST00000496445 ST20-MTHFSA0A0A6YYL1 179 aa20.21■□□□□ 0.83
VTI1A-209ENST00000496445 ARHGEF25Q86VW2 580 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms