RNA–Protein interactions for RNA: ENST00000496345.1

GSE1-211, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-211ENST00000496345 BTG4Q9NY30 223 aa17.57■□□□□ 0.4
GSE1-211ENST00000496345 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
GSE1-211ENST00000496345 CENPJQ9HC77 1338 aaPredicted RBP17.56■□□□□ 0.4
GSE1-211ENST00000496345 NBPF8Q3BBV2 869 aa17.56■□□□□ 0.4
GSE1-211ENST00000496345 SRPK2P78362 688 aaKnown RBP17.55■□□□□ 0.4
GSE1-211ENST00000496345 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
GSE1-211ENST00000496345 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
GSE1-211ENST00000496345 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
GSE1-211ENST00000496345 NWD2Q9ULI1 1742 aa17.54■□□□□ 0.4
GSE1-211ENST00000496345 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
GSE1-211ENST00000496345 EP400Q96L91 3159 aa17.52■□□□□ 0.4
GSE1-211ENST00000496345 ONECUT3O60422 494 aaPredicted RBP17.52■□□□□ 0.4
GSE1-211ENST00000496345 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.4
GSE1-211ENST00000496345 A0A0G2JS52 829 aa17.51■□□□□ 0.39
GSE1-211ENST00000496345 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
GSE1-211ENST00000496345 MYT1Q01538 1121 aa17.51■□□□□ 0.39
GSE1-211ENST00000496345 CHRNA2Q15822 529 aa17.51■□□□□ 0.39
GSE1-211ENST00000496345 FAM98CQ17RN3 349 aaKnown RBP17.51■□□□□ 0.39
GSE1-211ENST00000496345 BRWD3Q6RI45 1802 aa17.51■□□□□ 0.39
GSE1-211ENST00000496345 TOPAZ1Q8N9V7 1692 aa17.51■□□□□ 0.39
GSE1-211ENST00000496345 CRYBG1Q9Y4K1 1723 aa17.5■□□□□ 0.39
GSE1-211ENST00000496345 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
GSE1-211ENST00000496345 COL14A1Q05707 1796 aaKnown RBP17.5■□□□□ 0.39
GSE1-211ENST00000496345 KIAA0232Q92628 1395 aa17.5■□□□□ 0.39
GSE1-211ENST00000496345 PPIP5K1Q6PFW1 1433 aa17.49■□□□□ 0.39
GSE1-211ENST00000496345 KRT27Q7Z3Y8 459 aa17.49■□□□□ 0.39
GSE1-211ENST00000496345 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
GSE1-211ENST00000496345 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
GSE1-211ENST00000496345 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
GSE1-211ENST00000496345 QRICH2Q9H0J4 1663 aa17.47■□□□□ 0.39
GSE1-211ENST00000496345 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
GSE1-211ENST00000496345 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
GSE1-211ENST00000496345 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
GSE1-211ENST00000496345 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
GSE1-211ENST00000496345 TRPM1Q7Z4N2 1603 aa17.46■□□□□ 0.39
GSE1-211ENST00000496345 DEFB132Q7Z7B7 95 aa17.45■□□□□ 0.38
GSE1-211ENST00000496345 BLMP54132 1417 aaPredicted RBP17.45■□□□□ 0.38
GSE1-211ENST00000496345 PHRF1Q9P1Y6 1649 aaKnown RBP17.44■□□□□ 0.38
GSE1-211ENST00000496345 FAM182BQ5T319 152 aa17.44■□□□□ 0.38
GSE1-211ENST00000496345 EVC2Q86UK5 1308 aa17.44■□□□□ 0.38
GSE1-211ENST00000496345 NLRP13Q86W25 1043 aa17.43■□□□□ 0.38
GSE1-211ENST00000496345 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
GSE1-211ENST00000496345 EVA1CP58658 441 aa17.42■□□□□ 0.38
GSE1-211ENST00000496345 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
GSE1-211ENST00000496345 SPATA31A1Q5TZJ5 1347 aa17.42■□□□□ 0.38
GSE1-211ENST00000496345 GCP02774 474 aa17.41■□□□□ 0.38
GSE1-211ENST00000496345 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
GSE1-211ENST00000496345 USP19O94966 1318 aa17.41■□□□□ 0.38
GSE1-211ENST00000496345 NLRP6P59044 892 aa17.4■□□□□ 0.38
GSE1-211ENST00000496345 USP6P35125 1406 aa17.39■□□□□ 0.38
GSE1-211ENST00000496345 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
GSE1-211ENST00000496345 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
GSE1-211ENST00000496345 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
GSE1-211ENST00000496345 CAMTA1Q9Y6Y1 1673 aa17.38■□□□□ 0.37
GSE1-211ENST00000496345 CPDO75976 1380 aa17.38■□□□□ 0.37
GSE1-211ENST00000496345 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
GSE1-211ENST00000496345 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
GSE1-211ENST00000496345 SSH2Q76I76 1423 aa17.37■□□□□ 0.37
GSE1-211ENST00000496345 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
GSE1-211ENST00000496345 THSD7AQ9UPZ6 1657 aa17.36■□□□□ 0.37
GSE1-211ENST00000496345 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
GSE1-211ENST00000496345 SRCAPQ6ZRS2 3230 aa17.34■□□□□ 0.37
GSE1-211ENST00000496345 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
GSE1-211ENST00000496345 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
GSE1-211ENST00000496345 BAG6P46379 1132 aa17.33■□□□□ 0.36
GSE1-211ENST00000496345 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
GSE1-211ENST00000496345 SOX12O15370 315 aa17.32■□□□□ 0.36
GSE1-211ENST00000496345 EN1Q05925 392 aaPredicted RBP17.32■□□□□ 0.36
GSE1-211ENST00000496345 BARGINQ6ZT62 677 aa17.32■□□□□ 0.36
GSE1-211ENST00000496345 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
GSE1-211ENST00000496345 SLIT3O75094 1523 aa17.31■□□□□ 0.36
GSE1-211ENST00000496345 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
GSE1-211ENST00000496345 PIK3C2AO00443 1686 aa17.3■□□□□ 0.36
GSE1-211ENST00000496345 TRIM37O94972 964 aa17.3■□□□□ 0.36
GSE1-211ENST00000496345 PDE3BQ13370 1112 aa17.3■□□□□ 0.36
GSE1-211ENST00000496345 COL5A2P05997 1499 aaPredicted RBP17.3■□□□□ 0.36
GSE1-211ENST00000496345 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
GSE1-211ENST00000496345 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
GSE1-211ENST00000496345 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
GSE1-211ENST00000496345 TMC1Q8TDI8 760 aa17.29■□□□□ 0.36
GSE1-211ENST00000496345 AXIN2Q9Y2T1 843 aa17.29■□□□□ 0.36
GSE1-211ENST00000496345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
GSE1-211ENST00000496345 AKAP12Q02952 1782 aa17.28■□□□□ 0.36
GSE1-211ENST00000496345 SBNO2Q9Y2G9 1366 aa17.28■□□□□ 0.36
GSE1-211ENST00000496345 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
GSE1-211ENST00000496345 PSDA5PKW4 1024 aaPredicted RBP17.27■□□□□ 0.36
GSE1-211ENST00000496345 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
GSE1-211ENST00000496345 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
GSE1-211ENST00000496345 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.36
GSE1-211ENST00000496345 TOM1L2Q6ZVM7 507 aa17.26■□□□□ 0.35
GSE1-211ENST00000496345 CRB1P82279 1406 aa17.26■□□□□ 0.35
GSE1-211ENST00000496345 RGPD1P0DJD0 1748 aa17.26■□□□□ 0.35
GSE1-211ENST00000496345 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
GSE1-211ENST00000496345 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
GSE1-211ENST00000496345 APBA3O96018 575 aa17.24■□□□□ 0.35
GSE1-211ENST00000496345 NME9Q86XW9 330 aa17.24■□□□□ 0.35
GSE1-211ENST00000496345 COL18A1P39060 1754 aa17.24■□□□□ 0.35
GSE1-211ENST00000496345 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
GSE1-211ENST00000496345 ST20-MTHFSA0A0A6YYL1 179 aa17.23■□□□□ 0.35
GSE1-211ENST00000496345 CAMKK2Q96RR4 588 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms