RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 BCL9LQ86UU0 1499 aa20.6■□□□□ 0.89
PDAP1-204ENST00000496335 TRPC5Q9UL62 973 aaPredicted RBP20.59■□□□□ 0.89
PDAP1-204ENST00000496335 CABP1Q9NZU7 370 aa20.58■□□□□ 0.89
PDAP1-204ENST00000496335 ATRNO75882 1429 aa20.57■□□□□ 0.88
PDAP1-204ENST00000496335 NUTM2GQ5VZR2 741 aa20.56■□□□□ 0.88
PDAP1-204ENST00000496335 SLIT2O94813 1529 aa20.56■□□□□ 0.88
PDAP1-204ENST00000496335 CDK12Q9NYV4 1490 aaPredicted RBP20.56■□□□□ 0.88
PDAP1-204ENST00000496335 CRYBG1Q9Y4K1 1723 aa20.56■□□□□ 0.88
PDAP1-204ENST00000496335 FAM83GA6ND36 823 aa20.55■□□□□ 0.88
PDAP1-204ENST00000496335 RGS12O14924 1447 aa20.54■□□□□ 0.88
PDAP1-204ENST00000496335 UNC5CLQ8IV45 518 aa20.54■□□□□ 0.88
PDAP1-204ENST00000496335 PLCH1Q4KWH8 1693 aa20.54■□□□□ 0.88
PDAP1-204ENST00000496335 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.53■□□□□ 0.88
PDAP1-204ENST00000496335 CLSPNQ9HAW4 1339 aa20.52■□□□□ 0.87
PDAP1-204ENST00000496335 SBNO2Q9Y2G9 1366 aa20.51■□□□□ 0.87
PDAP1-204ENST00000496335 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
PDAP1-204ENST00000496335 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
PDAP1-204ENST00000496335 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
PDAP1-204ENST00000496335 USP6P35125 1406 aa20.49■□□□□ 0.87
PDAP1-204ENST00000496335 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
PDAP1-204ENST00000496335 ST20-MTHFSA0A0A6YYL1 179 aa20.48■□□□□ 0.87
PDAP1-204ENST00000496335 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
PDAP1-204ENST00000496335 COL14A1Q05707 1796 aaKnown RBP20.47■□□□□ 0.87
PDAP1-204ENST00000496335 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
PDAP1-204ENST00000496335 BTG4Q9NY30 223 aa20.47■□□□□ 0.87
PDAP1-204ENST00000496335 TIMELESSQ9UNS1 1208 aa20.47■□□□□ 0.87
PDAP1-204ENST00000496335 GLI3P10071 1580 aa20.46■□□□□ 0.87
PDAP1-204ENST00000496335 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
PDAP1-204ENST00000496335 PRDM11Q9NQV5 511 aa20.46■□□□□ 0.87
PDAP1-204ENST00000496335 AKAP12Q02952 1782 aa20.46■□□□□ 0.87
PDAP1-204ENST00000496335 KIAA0232Q92628 1395 aa20.46■□□□□ 0.87
PDAP1-204ENST00000496335 CHRNA2Q15822 529 aa20.45■□□□□ 0.86
PDAP1-204ENST00000496335 VPS72Q15906 364 aa20.45■□□□□ 0.86
PDAP1-204ENST00000496335 TESK2Q96S53 571 aa20.45■□□□□ 0.86
PDAP1-204ENST00000496335 BRD4O60885 1362 aaPredicted RBP20.45■□□□□ 0.86
PDAP1-204ENST00000496335 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
PDAP1-204ENST00000496335 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
PDAP1-204ENST00000496335 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.861e-17■■■■□ 20.8
PDAP1-204ENST00000496335 CCDC9Q9Y3X0 531 aaKnown RBP20.44■□□□□ 0.86
PDAP1-204ENST00000496335 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
PDAP1-204ENST00000496335 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
PDAP1-204ENST00000496335 USP19O94966 1318 aa20.43■□□□□ 0.86
PDAP1-204ENST00000496335 CPSF1Q10570 1443 aaKnown RBP20.43■□□□□ 0.86
PDAP1-204ENST00000496335 NRKQ7Z2Y5 1582 aa20.42■□□□□ 0.86
PDAP1-204ENST00000496335 NLRP6P59044 892 aa20.42■□□□□ 0.86
PDAP1-204ENST00000496335 TMC1Q8TDI8 760 aa20.42■□□□□ 0.86
PDAP1-204ENST00000496335 TTC21BQ7Z4L5 1316 aa20.41■□□□□ 0.86
PDAP1-204ENST00000496335 PIK3C2AO00443 1686 aa20.41■□□□□ 0.86
PDAP1-204ENST00000496335 GCP02774 474 aa20.4■□□□□ 0.86
PDAP1-204ENST00000496335 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
PDAP1-204ENST00000496335 USP47Q96K76 1375 aa20.4■□□□□ 0.86
PDAP1-204ENST00000496335 SLC12A5Q9H2X9 1139 aa20.4■□□□□ 0.86
PDAP1-204ENST00000496335 CD163L1Q9NR16 1453 aa20.38■□□□□ 0.85
PDAP1-204ENST00000496335 BRWD3Q6RI45 1802 aa20.38■□□□□ 0.85
PDAP1-204ENST00000496335 MON2Q7Z3U7 1717 aa20.38■□□□□ 0.85
PDAP1-204ENST00000496335 PUS7Q96PZ0 661 aaKnown RBP20.37■□□□□ 0.85
PDAP1-204ENST00000496335 CPDO75976 1380 aa20.36■□□□□ 0.85
PDAP1-204ENST00000496335 SEPT12Q8IYM1 358 aa20.36■□□□□ 0.85
PDAP1-204ENST00000496335 STRN4Q9NRL3 753 aa20.36■□□□□ 0.85
PDAP1-204ENST00000496335 TTC21AQ8NDW8 1320 aa20.35■□□□□ 0.85
PDAP1-204ENST00000496335 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
PDAP1-204ENST00000496335 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
PDAP1-204ENST00000496335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.35■□□□□ 0.85
PDAP1-204ENST00000496335 SLIT3O75094 1523 aa20.35■□□□□ 0.85
PDAP1-204ENST00000496335 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
PDAP1-204ENST00000496335 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
PDAP1-204ENST00000496335 FAM98CQ17RN3 349 aaKnown RBP20.34■□□□□ 0.85
PDAP1-204ENST00000496335 HDGFL2Q7Z4V5 671 aaPredicted RBP20.34■□□□□ 0.85
PDAP1-204ENST00000496335 ZRANB1Q9UGI0 708 aa20.34■□□□□ 0.85
PDAP1-204ENST00000496335 CAMTA1Q9Y6Y1 1673 aa20.34■□□□□ 0.85
PDAP1-204ENST00000496335 EP400Q96L91 3159 aa20.33■□□□□ 0.85
PDAP1-204ENST00000496335 SLC24A1O60721 1099 aa20.33■□□□□ 0.85
PDAP1-204ENST00000496335 A0A1W2PP64 1363 aa20.33■□□□□ 0.84
PDAP1-204ENST00000496335 LMO7Q8WWI1 1683 aa20.32■□□□□ 0.84
PDAP1-204ENST00000496335 A0A0G2JS52 829 aa20.32■□□□□ 0.84
PDAP1-204ENST00000496335 SOX12O15370 315 aa20.32■□□□□ 0.84
PDAP1-204ENST00000496335 EVA1CP58658 441 aa20.32■□□□□ 0.84
PDAP1-204ENST00000496335 TMF1P82094 1093 aa20.32■□□□□ 0.84
PDAP1-204ENST00000496335 MYT1Q01538 1121 aa20.32■□□□□ 0.84
PDAP1-204ENST00000496335 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
PDAP1-204ENST00000496335 NME9Q86XW9 330 aa20.31■□□□□ 0.84
PDAP1-204ENST00000496335 SPATA31A1Q5TZJ5 1347 aa20.29■□□□□ 0.84
PDAP1-204ENST00000496335 LARP1Q6PKG0 1096 aaKnown RBP20.29■□□□□ 0.84
PDAP1-204ENST00000496335 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
PDAP1-204ENST00000496335 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
PDAP1-204ENST00000496335 KCNH5Q8NCM2 988 aa20.28■□□□□ 0.84
PDAP1-204ENST00000496335 COL18A1P39060 1754 aa20.27■□□□□ 0.84
PDAP1-204ENST00000496335 AATKQ6ZMQ8 1374 aa20.27■□□□□ 0.84
PDAP1-204ENST00000496335 NINLQ9Y2I6 1382 aa20.27■□□□□ 0.84
PDAP1-204ENST00000496335 KRT27Q7Z3Y8 459 aa20.27■□□□□ 0.84
PDAP1-204ENST00000496335 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
PDAP1-204ENST00000496335 ARHGEF25Q86VW2 580 aa20.26■□□□□ 0.83
PDAP1-204ENST00000496335 RGPD5Q99666 1765 aa20.26■□□□□ 0.83
PDAP1-204ENST00000496335 COL5A2P05997 1499 aaPredicted RBP20.25■□□□□ 0.83
PDAP1-204ENST00000496335 AXIN2Q9Y2T1 843 aa20.25■□□□□ 0.83
PDAP1-204ENST00000496335 NFAT5O94916 1531 aa20.25■□□□□ 0.83
PDAP1-204ENST00000496335 USP54Q70EL1 1684 aa20.24■□□□□ 0.83
PDAP1-204ENST00000496335 THSD7AQ9UPZ6 1657 aa20.24■□□□□ 0.83
PDAP1-204ENST00000496335 CDCA8Q53HL2 280 aa20.22■□□□□ 0.83
PDAP1-204ENST00000496335 FAM182BQ5T319 152 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms