RNA–Protein interactions for RNA: ENST00000496169.5

MKRN1-215, Transcript of makorin ring finger protein 1, human

TSL 2

Gene MKRN1, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN1-215	ENST00000496169	USP21	Q9UK80	565 aa		33.05	■■■□□ 2.88
MKRN1-215	ENST00000496169	CCER1	Q8TC90	406 aa	Predicted RBP	33.02	■■■□□ 2.88
MKRN1-215	ENST00000496169	CABP1	Q9NZU7	370 aa		32.99	■■■□□ 2.87
MKRN1-215	ENST00000496169	SBNO2	Q9Y2G9	1366 aa		32.99	■■■□□ 2.87
MKRN1-215	ENST00000496169	TIMELESS	Q9UNS1	1208 aa		32.99	■■■□□ 2.87
MKRN1-215	ENST00000496169	BCL9L	Q86UU0	1499 aa		32.97	■■■□□ 2.87
MKRN1-215	ENST00000496169	RBM6	P78332	1123 aa	Known RBP	32.96	■■■□□ 2.87
MKRN1-215	ENST00000496169	TRPC5	Q9UL62	973 aa	Predicted RBP	32.96	■■■□□ 2.87
MKRN1-215	ENST00000496169	CRYBG1	Q9Y4K1	1723 aa		32.94	■■■□□ 2.86
MKRN1-215	ENST00000496169	SLIT2	O94813	1529 aa		32.92	■■■□□ 2.86
MKRN1-215	ENST00000496169	ATRN	O75882	1429 aa		32.92	■■■□□ 2.86
MKRN1-215	ENST00000496169	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.91	■■■□□ 2.86
MKRN1-215	ENST00000496169	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.91	■■■□□ 2.86
MKRN1-215	ENST00000496169	FAM83G	A6ND36	823 aa		32.89	■■■□□ 2.86
MKRN1-215	ENST00000496169	NUTM2G	Q5VZR2	741 aa		32.89	■■■□□ 2.86
MKRN1-215	ENST00000496169	ATAD2	Q6PL18	1390 aa		32.89	■■■□□ 2.85
MKRN1-215	ENST00000496169	UNC5CL	Q8IV45	518 aa		32.88	■■■□□ 2.85
MKRN1-215	ENST00000496169	PLCH1	Q4KWH8	1693 aa		32.88	■■■□□ 2.85
MKRN1-215	ENST00000496169	ST20-MTHFS	A0A0A6YYL1	179 aa		32.88	■■■□□ 2.85
MKRN1-215	ENST00000496169	ABTB2	Q8N961	1025 aa		32.88	■■■□□ 2.85
MKRN1-215	ENST00000496169	BRD4	O60885	1362 aa	Predicted RBP	32.86	■■■□□ 2.85
MKRN1-215	ENST00000496169	USP6	P35125	1406 aa		32.86	■■■□□ 2.85
MKRN1-215	ENST00000496169	NWD2	Q9ULI1	1742 aa		32.86	■■■□□ 2.85
MKRN1-215	ENST00000496169	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.84	■■■□□ 2.85
MKRN1-215	ENST00000496169	AKAP12	Q02952	1782 aa		32.84	■■■□□ 2.85
MKRN1-215	ENST00000496169	TESK2	Q96S53	571 aa		32.83	■■■□□ 2.85
MKRN1-215	ENST00000496169	RGS12	O14924	1447 aa		32.83	■■■□□ 2.85
MKRN1-215	ENST00000496169	ZNF692	Q9BU19	519 aa	Predicted RBP	32.82	■■■□□ 2.84
MKRN1-215	ENST00000496169	COL14A1	Q05707	1796 aa	Known RBP	32.81	■■■□□ 2.84
MKRN1-215	ENST00000496169	GJD4	Q96KN9	370 aa	Predicted RBP	32.81	■■■□□ 2.84
MKRN1-215	ENST00000496169	SSH2	Q76I76	1423 aa		32.8	■■■□□ 2.84
MKRN1-215	ENST00000496169	NLRP13	Q86W25	1043 aa		32.79	■■■□□ 2.84
MKRN1-215	ENST00000496169	USP47	Q96K76	1375 aa		32.78	■■■□□ 2.84
MKRN1-215	ENST00000496169	CPSF1	Q10570	1443 aa	Known RBP	32.77	■■■□□ 2.84
MKRN1-215	ENST00000496169	PUS7	Q96PZ0	661 aa	Known RBP	32.77	■■■□□ 2.84
MKRN1-215	ENST00000496169	PRDM11	Q9NQV5	511 aa		32.77	■■■□□ 2.84
MKRN1-215	ENST00000496169	BTG4	Q9NY30	223 aa		32.77	■■■□□ 2.84
MKRN1-215	ENST00000496169	USP19	O94966	1318 aa		32.76	■■■□□ 2.83
MKRN1-215	ENST00000496169	SLC24A1	O60721	1099 aa		32.76	■■■□□ 2.83
MKRN1-215	ENST00000496169	ZC3H6	P61129	1189 aa	Known RBP	32.76	■■■□□ 2.83
MKRN1-215	ENST00000496169	VPS72	Q15906	364 aa		32.75	■■■□□ 2.83
MKRN1-215	ENST00000496169	TMC1	Q8TDI8	760 aa		32.75	■■■□□ 2.83
MKRN1-215	ENST00000496169	KIAA0232	Q92628	1395 aa		32.75	■■■□□ 2.83
MKRN1-215	ENST00000496169	NRAP	Q86VF7	1730 aa		32.74	■■■□□ 2.83
MKRN1-215	ENST00000496169	GLI3	P10071	1580 aa		32.74	■■■□□ 2.83
MKRN1-215	ENST00000496169	NLRP6	P59044	892 aa		32.73	■■■□□ 2.83
MKRN1-215	ENST00000496169	KTN1	Q86UP2	1357 aa	Known RBP	32.73	■■■□□ 2.83
MKRN1-215	ENST00000496169	NRK	Q7Z2Y5	1582 aa		32.73	■■■□□ 2.83
MKRN1-215	ENST00000496169	TTC21B	Q7Z4L5	1316 aa		32.73	■■■□□ 2.83
MKRN1-215	ENST00000496169	SLC12A5	Q9H2X9	1139 aa		32.73	■■■□□ 2.83
MKRN1-215	ENST00000496169	PIK3C2A	O00443	1686 aa		32.72	■■■□□ 2.83
MKRN1-215	ENST00000496169	MON2	Q7Z3U7	1717 aa		32.72	■■■□□ 2.83
MKRN1-215	ENST00000496169	CHRNA2	Q15822	529 aa		32.71	■■■□□ 2.83
MKRN1-215	ENST00000496169	GC	P02774	474 aa		32.7	■■■□□ 2.83
MKRN1-215	ENST00000496169	CCDC9	Q9Y3X0	531 aa	Known RBP	32.7	■■■□□ 2.83
MKRN1-215	ENST00000496169	CD163L1	Q9NR16	1453 aa		32.7	■■■□□ 2.82
MKRN1-215	ENST00000496169	TTC21A	Q8NDW8	1320 aa		32.68	■■■□□ 2.82
MKRN1-215	ENST00000496169	TMF1	P82094	1093 aa		32.66	■■■□□ 2.82
MKRN1-215	ENST00000496169	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.66	■■■□□ 2.82
MKRN1-215	ENST00000496169	CPD	O75976	1380 aa		32.65	■■■□□ 2.82
MKRN1-215	ENST00000496169	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
MKRN1-215	ENST00000496169	SLIT3	O75094	1523 aa		32.64	■■■□□ 2.81
MKRN1-215	ENST00000496169	TERF2IP	Q9NYB0	399 aa		32.63	■■■□□ 2.81
MKRN1-215	ENST00000496169	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
MKRN1-215	ENST00000496169	NINL	Q9Y2I6	1382 aa		32.6	■■■□□ 2.81
MKRN1-215	ENST00000496169		A0A1W2PP64	1363 aa		32.59	■■■□□ 2.81
MKRN1-215	ENST00000496169	BRWD3	Q6RI45	1802 aa		32.59	■■■□□ 2.81
MKRN1-215	ENST00000496169	ONECUT3	O60422	494 aa	Predicted RBP	32.59	■■■□□ 2.81
MKRN1-215	ENST00000496169	LMO7	Q8WWI1	1683 aa		32.59	■■■□□ 2.81
MKRN1-215	ENST00000496169	CAMTA1	Q9Y6Y1	1673 aa		32.58	■■■□□ 2.81
MKRN1-215	ENST00000496169	SPATA31A5	Q5VU36	1347 aa		32.58	■■■□□ 2.81
MKRN1-215	ENST00000496169	SPATA31A7	Q8IWB4	1347 aa		32.58	■■■□□ 2.81
MKRN1-215	ENST00000496169	STRN4	Q9NRL3	753 aa		32.58	■■■□□ 2.81
MKRN1-215	ENST00000496169	SEPT12	Q8IYM1	358 aa		32.57	■■■□□ 2.8
MKRN1-215	ENST00000496169	EDC4	Q6P2E9	1401 aa	Known RBP	32.56	■■■□□ 2.8
MKRN1-215	ENST00000496169	ZRANB1	Q9UGI0	708 aa		32.55	■■■□□ 2.8
MKRN1-215	ENST00000496169	ZBTB7C	A1YPR0	619 aa		32.55	■■■□□ 2.8
MKRN1-215	ENST00000496169	EVA1C	P58658	441 aa		32.55	■■■□□ 2.8
MKRN1-215	ENST00000496169	NME9	Q86XW9	330 aa		32.55	■■■□□ 2.8
MKRN1-215	ENST00000496169	KCNH5	Q8NCM2	988 aa		32.55	■■■□□ 2.8
MKRN1-215	ENST00000496169	FAM98C	Q17RN3	349 aa	Known RBP	32.54	■■■□□ 2.8
MKRN1-215	ENST00000496169	CDCA8	Q53HL2	280 aa		32.54	■■■□□ 2.8
MKRN1-215	ENST00000496169	USP31	Q70CQ4	1352 aa		32.53	■■■□□ 2.8
MKRN1-215	ENST00000496169	SOX12	O15370	315 aa		32.51	■■■□□ 2.8
MKRN1-215	ENST00000496169	USP54	Q70EL1	1684 aa		32.51	■■■□□ 2.8
MKRN1-215	ENST00000496169	SPATA31A1	Q5TZJ5	1347 aa		32.5	■■■□□ 2.79
MKRN1-215	ENST00000496169	COL18A1	P39060	1754 aa		32.5	■■■□□ 2.79
MKRN1-215	ENST00000496169	AATK	Q6ZMQ8	1374 aa		32.5	■■■□□ 2.79
MKRN1-215	ENST00000496169	EP400	Q96L91	3159 aa		32.49	■■■□□ 2.79
MKRN1-215	ENST00000496169	ARHGEF25	Q86VW2	580 aa		32.49	■■■□□ 2.79
MKRN1-215	ENST00000496169		A0A0G2JS52	829 aa		32.48	■■■□□ 2.79
MKRN1-215	ENST00000496169	MYT1	Q01538	1121 aa		32.48	■■■□□ 2.79
MKRN1-215	ENST00000496169	ANKRD36B	Q8N2N9	1353 aa		32.48	■■■□□ 2.79
MKRN1-215	ENST00000496169	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
MKRN1-215	ENST00000496169	LARP1	Q6PKG0	1096 aa	Known RBP	32.48	■■■□□ 2.79
MKRN1-215	ENST00000496169	NFAT5	O94916	1531 aa		32.47	■■■□□ 2.79
MKRN1-215	ENST00000496169	COL5A2	P05997	1499 aa	Predicted RBP	32.46	■■■□□ 2.79
MKRN1-215	ENST00000496169	RGPD5	Q99666	1765 aa		32.45	■■■□□ 2.79
MKRN1-215	ENST00000496169	HSPA5	P11021	654 aa	Known RBP	32.44	■■■□□ 2.78
MKRN1-215	ENST00000496169	USP35	Q9P2H5	1018 aa		32.44	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms