RNA–Protein interactions for RNA: ENST00000496065.1

C4B-215, Transcript of complement C4B (Chido blood group), human

TSL 3

Gene C4B, Length 974 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4B-215	ENST00000496065	RALGAPB	Q86X10	1494 aa		32.94	■■■□□ 2.86
C4B-215	ENST00000496065	TRIM26	Q12899	539 aa	Predicted RBP	32.94	■■■□□ 2.86
C4B-215	ENST00000496065	CABP2	Q9NPB3	220 aa		32.93	■■■□□ 2.86
C4B-215	ENST00000496065	ROCK2	O75116	1388 aa	Known RBP	32.92	■■■□□ 2.86
C4B-215	ENST00000496065	ABCA3	Q99758	1704 aa		32.91	■■■□□ 2.86
C4B-215	ENST00000496065	CCDC9	Q9Y3X0	531 aa	Known RBP	32.91	■■■□□ 2.86
C4B-215	ENST00000496065	BTG4	Q9NY30	223 aa		32.89	■■■□□ 2.86
C4B-215	ENST00000496065	GLI3	P10071	1580 aa		32.87	■■■□□ 2.85
C4B-215	ENST00000496065	TRPM1	Q7Z4N2	1603 aa		32.87	■■■□□ 2.85
C4B-215	ENST00000496065	PPIP5K1	Q6PFW1	1433 aa		32.86	■■■□□ 2.85
C4B-215	ENST00000496065	TOPAZ1	Q8N9V7	1692 aa		32.86	■■■□□ 2.85
C4B-215	ENST00000496065	NWD2	Q9ULI1	1742 aa		32.85	■■■□□ 2.85
C4B-215	ENST00000496065	EVC2	Q86UK5	1308 aa		32.85	■■■□□ 2.85
C4B-215	ENST00000496065	NUTM2G	Q5VZR2	741 aa		32.85	■■■□□ 2.85
C4B-215	ENST00000496065	PLCH1	Q4KWH8	1693 aa		32.85	■■■□□ 2.85
C4B-215	ENST00000496065	ONECUT3	O60422	494 aa	Predicted RBP	32.84	■■■□□ 2.85
C4B-215	ENST00000496065	PRDM11	Q9NQV5	511 aa		32.84	■■■□□ 2.85
C4B-215	ENST00000496065	SEPT12	Q8IYM1	358 aa		32.83	■■■□□ 2.85
C4B-215	ENST00000496065	ABTB2	Q8N961	1025 aa		32.83	■■■□□ 2.85
C4B-215	ENST00000496065	CABP1	Q9NZU7	370 aa		32.83	■■■□□ 2.85
C4B-215	ENST00000496065	QRICH2	Q9H0J4	1663 aa		32.82	■■■□□ 2.84
C4B-215	ENST00000496065	CCDC125	Q86Z20	511 aa		32.8	■■■□□ 2.84
C4B-215	ENST00000496065	TONSL	Q96HA7	1378 aa		32.8	■■■□□ 2.84
C4B-215	ENST00000496065	COL14A1	Q05707	1796 aa	Known RBP	32.79	■■■□□ 2.84
C4B-215	ENST00000496065	BRD4	O60885	1362 aa	Predicted RBP	32.78	■■■□□ 2.84
C4B-215	ENST00000496065	KIAA0232	Q92628	1395 aa		32.78	■■■□□ 2.84
C4B-215	ENST00000496065	ZC3H6	P61129	1189 aa	Known RBP	32.77	■■■□□ 2.84
C4B-215	ENST00000496065	NLRP13	Q86W25	1043 aa		32.76	■■■□□ 2.83
C4B-215	ENST00000496065	CRYBG1	Q9Y4K1	1723 aa		32.76	■■■□□ 2.83
C4B-215	ENST00000496065	CARD11	Q9BXL7	1154 aa		32.75	■■■□□ 2.83
C4B-215	ENST00000496065	CHRNA2	Q15822	529 aa		32.74	■■■□□ 2.83
C4B-215	ENST00000496065	FAM98C	Q17RN3	349 aa	Known RBP	32.72	■■■□□ 2.83
C4B-215	ENST00000496065	SPATA31A5	Q5VU36	1347 aa		32.72	■■■□□ 2.83
C4B-215	ENST00000496065	SPATA31A7	Q8IWB4	1347 aa		32.72	■■■□□ 2.83
C4B-215	ENST00000496065		A0A0G2JS52	829 aa		32.71	■■■□□ 2.83
C4B-215	ENST00000496065	MYT1	Q01538	1121 aa		32.71	■■■□□ 2.83
C4B-215	ENST00000496065	KRT27	Q7Z3Y8	459 aa		32.71	■■■□□ 2.83
C4B-215	ENST00000496065	USP19	O94966	1318 aa		32.71	■■■□□ 2.83
C4B-215	ENST00000496065	NRAP	Q86VF7	1730 aa		32.71	■■■□□ 2.83
C4B-215	ENST00000496065	USP6	P35125	1406 aa		32.69	■■■□□ 2.82
C4B-215	ENST00000496065	ZNF692	Q9BU19	519 aa	Predicted RBP	32.68	■■■□□ 2.82
C4B-215	ENST00000496065	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.67	■■■□□ 2.82
C4B-215	ENST00000496065	GC	P02774	474 aa		32.67	■■■□□ 2.82
C4B-215	ENST00000496065	NLRP6	P59044	892 aa		32.66	■■■□□ 2.82
C4B-215	ENST00000496065	STRN4	Q9NRL3	753 aa		32.66	■■■□□ 2.82
C4B-215	ENST00000496065	CPD	O75976	1380 aa		32.65	■■■□□ 2.82
C4B-215	ENST00000496065	EVA1C	P58658	441 aa		32.64	■■■□□ 2.82
C4B-215	ENST00000496065	EP400	Q96L91	3159 aa		32.64	■■■□□ 2.82
C4B-215	ENST00000496065	SBNO2	Q9Y2G9	1366 aa		32.64	■■■□□ 2.82
C4B-215	ENST00000496065	BLM	P54132	1417 aa	Predicted RBP	32.63	■■■□□ 2.81
C4B-215	ENST00000496065	SPATA31A1	Q5TZJ5	1347 aa		32.62	■■■□□ 2.81
C4B-215	ENST00000496065	BRWD3	Q6RI45	1802 aa		32.62	■■■□□ 2.81
C4B-215	ENST00000496065	SSH2	Q76I76	1423 aa		32.61	■■■□□ 2.81
C4B-215	ENST00000496065	NRK	Q7Z2Y5	1582 aa		32.6	■■■□□ 2.81
C4B-215	ENST00000496065	SF3B2	Q13435	895 aa	Known RBP	32.59	■■■□□ 2.81
C4B-215	ENST00000496065	TTC21B	Q7Z4L5	1316 aa		32.57	■■■□□ 2.8
C4B-215	ENST00000496065	CPSF1	Q10570	1443 aa	Known RBP	32.54	■■■□□ 2.8
C4B-215	ENST00000496065	CAMTA1	Q9Y6Y1	1673 aa		32.54	■■■□□ 2.8
C4B-215	ENST00000496065	USP35	Q9P2H5	1018 aa		32.54	■■■□□ 2.8
C4B-215	ENST00000496065	TTC21A	Q8NDW8	1320 aa		32.53	■■■□□ 2.8
C4B-215	ENST00000496065	LARP1	Q6PKG0	1096 aa	Known RBP	32.53	■■■□□ 2.8
C4B-215	ENST00000496065	ZRANB1	Q9UGI0	708 aa		32.53	■■■□□ 2.8
C4B-215	ENST00000496065	KTN1	Q86UP2	1357 aa	Known RBP	32.53	■■■□□ 2.8
C4B-215	ENST00000496065	ZBTB7C	A1YPR0	619 aa		32.52	■■■□□ 2.8
C4B-215	ENST00000496065	BARGIN	Q6ZT62	677 aa		32.51	■■■□□ 2.79
C4B-215	ENST00000496065	DEFB132	Q7Z7B7	95 aa		32.49	■■■□□ 2.79
C4B-215	ENST00000496065	TMC1	Q8TDI8	760 aa		32.49	■■■□□ 2.79
C4B-215	ENST00000496065	SLIT3	O75094	1523 aa		32.49	■■■□□ 2.79
C4B-215	ENST00000496065	AATK	Q6ZMQ8	1374 aa		32.48	■■■□□ 2.79
C4B-215	ENST00000496065	FAM182B	Q5T319	152 aa		32.48	■■■□□ 2.79
C4B-215	ENST00000496065	TCP11L2	Q8N4U5	519 aa		32.48	■■■□□ 2.79
C4B-215	ENST00000496065	KCNH5	Q8NCM2	988 aa		32.48	■■■□□ 2.79
C4B-215	ENST00000496065	PUS7	Q96PZ0	661 aa	Known RBP	32.48	■■■□□ 2.79
C4B-215	ENST00000496065	LMO7	Q8WWI1	1683 aa		32.47	■■■□□ 2.79
C4B-215	ENST00000496065	THSD7A	Q9UPZ6	1657 aa		32.47	■■■□□ 2.79
C4B-215	ENST00000496065	PIK3C2A	O00443	1686 aa		32.46	■■■□□ 2.79
C4B-215	ENST00000496065	ST20-MTHFS	A0A0A6YYL1	179 aa		32.45	■■■□□ 2.79
C4B-215	ENST00000496065	SLC24A1	O60721	1099 aa		32.45	■■■□□ 2.79
C4B-215	ENST00000496065	THRAP3	Q9Y2W1	955 aa	Known RBP	32.45	■■■□□ 2.79
C4B-215	ENST00000496065	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.44	■■■□□ 2.78
C4B-215	ENST00000496065	SLC12A5	Q9H2X9	1139 aa		32.44	■■■□□ 2.78
C4B-215	ENST00000496065	COL5A2	P05997	1499 aa	Predicted RBP	32.43	■■■□□ 2.78
C4B-215	ENST00000496065	AKAP12	Q02952	1782 aa		32.43	■■■□□ 2.78
C4B-215	ENST00000496065	BAG6	P46379	1132 aa		32.43	■■■□□ 2.78
C4B-215	ENST00000496065	ARHGEF25	Q86VW2	580 aa		32.42	■■■□□ 2.78
C4B-215	ENST00000496065	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
C4B-215	ENST00000496065	TESK2	Q96S53	571 aa		32.42	■■■□□ 2.78
C4B-215	ENST00000496065	TERF2IP	Q9NYB0	399 aa		32.41	■■■□□ 2.78
C4B-215	ENST00000496065	SOX12	O15370	315 aa		32.4	■■■□□ 2.78
C4B-215	ENST00000496065	PDE3B	Q13370	1112 aa		32.4	■■■□□ 2.78
C4B-215	ENST00000496065	FAM196A	Q6ZSG2	479 aa		32.4	■■■□□ 2.78
C4B-215	ENST00000496065	AXIN2	Q9Y2T1	843 aa		32.39	■■■□□ 2.78
C4B-215	ENST00000496065	CD163L1	Q9NR16	1453 aa		32.38	■■■□□ 2.77
C4B-215	ENST00000496065	CRB1	P82279	1406 aa		32.38	■■■□□ 2.77
C4B-215	ENST00000496065	PCGF6	Q9BYE7	350 aa		32.37	■■■□□ 2.77
C4B-215	ENST00000496065	USP31	Q70CQ4	1352 aa		32.36	■■■□□ 2.77
C4B-215	ENST00000496065	TOM1L2	Q6ZVM7	507 aa		32.36	■■■□□ 2.77
C4B-215	ENST00000496065	TIMELESS	Q9UNS1	1208 aa		32.36	■■■□□ 2.77
C4B-215	ENST00000496065	NME9	Q86XW9	330 aa		32.35	■■■□□ 2.77
C4B-215	ENST00000496065	WDR17	Q8IZU2	1322 aa		32.33	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms