RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 CCDC61Q9Y6R9 512 aa24.42■■□□□ 1.5
APOBEC3A-204ENST00000495988 CRYBG1Q9Y4K1 1723 aa24.41■■□□□ 1.5
APOBEC3A-204ENST00000495988 NEUROD1Q13562 356 aa24.4■■□□□ 1.5
APOBEC3A-204ENST00000495988 COL14A1Q05707 1796 aaKnown RBP24.39■■□□□ 1.5
APOBEC3A-204ENST00000495988 ACEP12821 1306 aa24.39■■□□□ 1.5
APOBEC3A-204ENST00000495988 BTG4Q9NY30 223 aa24.39■■□□□ 1.49
APOBEC3A-204ENST00000495988 POLR3AO14802 1390 aaPredicted RBP24.39■■□□□ 1.49
APOBEC3A-204ENST00000495988 SRPK2P78362 688 aaKnown RBP24.38■■□□□ 1.49
APOBEC3A-204ENST00000495988 NRAPQ86VF7 1730 aa24.38■■□□□ 1.49
APOBEC3A-204ENST00000495988 QRICH2Q9H0J4 1663 aa24.37■■□□□ 1.49
APOBEC3A-204ENST00000495988 PLEKHG3A1L390 1219 aa24.37■■□□□ 1.49
APOBEC3A-204ENST00000495988 SEPT12Q8IYM1 358 aa24.37■■□□□ 1.49
APOBEC3A-204ENST00000495988 BRWD3Q6RI45 1802 aa24.37■■□□□ 1.49
APOBEC3A-204ENST00000495988 TRPM1Q7Z4N2 1603 aa24.36■■□□□ 1.49
APOBEC3A-204ENST00000495988 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
APOBEC3A-204ENST00000495988 CCDC125Q86Z20 511 aa24.34■■□□□ 1.49
APOBEC3A-204ENST00000495988 CABP2Q9NPB3 220 aa24.34■■□□□ 1.49
APOBEC3A-204ENST00000495988 PRDM11Q9NQV5 511 aa24.34■■□□□ 1.49
APOBEC3A-204ENST00000495988 PHRF1Q9P1Y6 1649 aaKnown RBP24.33■■□□□ 1.49
APOBEC3A-204ENST00000495988 ONECUT3O60422 494 aaPredicted RBP24.33■■□□□ 1.49
APOBEC3A-204ENST00000495988 NUTM2GQ5VZR2 741 aa24.33■■□□□ 1.49
APOBEC3A-204ENST00000495988 PPIP5K1Q6PFW1 1433 aa24.33■■□□□ 1.49
APOBEC3A-204ENST00000495988 ROCK2O75116 1388 aaKnown RBP24.31■■□□□ 1.48
APOBEC3A-204ENST00000495988 A0A0G2JS52 829 aa24.31■■□□□ 1.48
APOBEC3A-204ENST00000495988 MYT1Q01538 1121 aa24.31■■□□□ 1.48
APOBEC3A-204ENST00000495988 EP400Q96L91 3159 aa24.3■■□□□ 1.48
APOBEC3A-204ENST00000495988 KIAA0232Q92628 1395 aa24.29■■□□□ 1.48
APOBEC3A-204ENST00000495988 ABTB2Q8N961 1025 aa24.29■■□□□ 1.48
APOBEC3A-204ENST00000495988 FAM98CQ17RN3 349 aaKnown RBP24.28■■□□□ 1.48
APOBEC3A-204ENST00000495988 KRT27Q7Z3Y8 459 aa24.28■■□□□ 1.48
APOBEC3A-204ENST00000495988 ZC3H6P61129 1189 aaKnown RBP24.27■■□□□ 1.48
APOBEC3A-204ENST00000495988 CHRNA2Q15822 529 aa24.27■■□□□ 1.48
APOBEC3A-204ENST00000495988 BLMP54132 1417 aaPredicted RBP24.27■■□□□ 1.48
APOBEC3A-204ENST00000495988 SPATA31A5Q5VU36 1347 aa24.26■■□□□ 1.47
APOBEC3A-204ENST00000495988 SPATA31A7Q8IWB4 1347 aa24.26■■□□□ 1.47
APOBEC3A-204ENST00000495988 CABP1Q9NZU7 370 aa24.25■■□□□ 1.47
APOBEC3A-204ENST00000495988 EVC2Q86UK5 1308 aa24.25■■□□□ 1.47
APOBEC3A-204ENST00000495988 NRKQ7Z2Y5 1582 aa24.25■■□□□ 1.47
APOBEC3A-204ENST00000495988 BRD4O60885 1362 aaPredicted RBP24.22■■□□□ 1.47
APOBEC3A-204ENST00000495988 USP19O94966 1318 aa24.22■■□□□ 1.47
APOBEC3A-204ENST00000495988 SF3B2Q13435 895 aaKnown RBP24.22■■□□□ 1.47
APOBEC3A-204ENST00000495988 NLRP13Q86W25 1043 aa24.22■■□□□ 1.47
APOBEC3A-204ENST00000495988 STRN4Q9NRL3 753 aa24.22■■□□□ 1.47
APOBEC3A-204ENST00000495988 USP6P35125 1406 aa24.21■■□□□ 1.47
APOBEC3A-204ENST00000495988 ZRANB1Q9UGI0 708 aa24.2■■□□□ 1.46
APOBEC3A-204ENST00000495988 SPATA31A1Q5TZJ5 1347 aa24.19■■□□□ 1.46
APOBEC3A-204ENST00000495988 THSD7AQ9UPZ6 1657 aa24.18■■□□□ 1.46
APOBEC3A-204ENST00000495988 CPDO75976 1380 aa24.17■■□□□ 1.46
APOBEC3A-204ENST00000495988 TONSLQ96HA7 1378 aa24.17■■□□□ 1.46
APOBEC3A-204ENST00000495988 GCP02774 474 aa24.17■■□□□ 1.46
APOBEC3A-204ENST00000495988 EVA1CP58658 441 aa24.17■■□□□ 1.46
APOBEC3A-204ENST00000495988 DEFB132Q7Z7B7 95 aa24.17■■□□□ 1.46
APOBEC3A-204ENST00000495988 CAMTA1Q9Y6Y1 1673 aa24.15■■□□□ 1.46
APOBEC3A-204ENST00000495988 NLRP6P59044 892 aa24.15■■□□□ 1.46
APOBEC3A-204ENST00000495988 CARD11Q9BXL7 1154 aa24.15■■□□□ 1.46
APOBEC3A-204ENST00000495988 SSH2Q76I76 1423 aa24.15■■□□□ 1.46
APOBEC3A-204ENST00000495988 LMO7Q8WWI1 1683 aa24.15■■□□□ 1.46
APOBEC3A-204ENST00000495988 USP35Q9P2H5 1018 aa24.14■■□□□ 1.45
APOBEC3A-204ENST00000495988 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
APOBEC3A-204ENST00000495988 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
APOBEC3A-204ENST00000495988 ZNF692Q9BU19 519 aaPredicted RBP24.12■■□□□ 1.45
APOBEC3A-204ENST00000495988 PIK3C2AO00443 1686 aa24.11■■□□□ 1.45
APOBEC3A-204ENST00000495988 ZBTB7CA1YPR0 619 aa24.11■■□□□ 1.45
APOBEC3A-204ENST00000495988 AKAP12Q02952 1782 aa24.11■■□□□ 1.45
APOBEC3A-204ENST00000495988 SLIT3O75094 1523 aa24.1■■□□□ 1.45
APOBEC3A-204ENST00000495988 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
APOBEC3A-204ENST00000495988 SBNO2Q9Y2G9 1366 aa24.1■■□□□ 1.45
APOBEC3A-204ENST00000495988 BAG6P46379 1132 aa24.09■■□□□ 1.45
APOBEC3A-204ENST00000495988 TTC21BQ7Z4L5 1316 aa24.09■■□□□ 1.45
APOBEC3A-204ENST00000495988 RGPD1P0DJD0 1748 aa24.08■■□□□ 1.45
APOBEC3A-204ENST00000495988 BARGINQ6ZT62 677 aa24.08■■□□□ 1.45
APOBEC3A-204ENST00000495988 COL5A2P05997 1499 aaPredicted RBP24.07■■□□□ 1.44
APOBEC3A-204ENST00000495988 TCP11L2Q8N4U5 519 aa24.06■■□□□ 1.44
APOBEC3A-204ENST00000495988 CPSF1Q10570 1443 aaKnown RBP24.06■■□□□ 1.44
APOBEC3A-204ENST00000495988 KTN1Q86UP2 1357 aaKnown RBP24.05■■□□□ 1.44
APOBEC3A-204ENST00000495988 TTC21AQ8NDW8 1320 aa24.05■■□□□ 1.44
APOBEC3A-204ENST00000495988 AATKQ6ZMQ8 1374 aa24.04■■□□□ 1.44
APOBEC3A-204ENST00000495988 THRAP3Q9Y2W1 955 aaKnown RBP24.03■■□□□ 1.44
APOBEC3A-204ENST00000495988 MON2Q7Z3U7 1717 aa24.02■■□□□ 1.44
APOBEC3A-204ENST00000495988 PDE3BQ13370 1112 aa24.02■■□□□ 1.44
APOBEC3A-204ENST00000495988 FAM196AQ6ZSG2 479 aa24.02■■□□□ 1.44
APOBEC3A-204ENST00000495988 CRB1P82279 1406 aa24.01■■□□□ 1.43
APOBEC3A-204ENST00000495988 EN1Q05925 392 aaPredicted RBP24.01■■□□□ 1.43
APOBEC3A-204ENST00000495988 KCNH5Q8NCM2 988 aa24.01■■□□□ 1.43
APOBEC3A-204ENST00000495988 TNS1Q9HBL0 1735 aaKnown RBP24.01■■□□□ 1.43
APOBEC3A-204ENST00000495988 SOX12O15370 315 aa24■■□□□ 1.43
APOBEC3A-204ENST00000495988 COL18A1P39060 1754 aa24■■□□□ 1.43
APOBEC3A-204ENST00000495988 TMC1Q8TDI8 760 aa23.99■■□□□ 1.43
APOBEC3A-204ENST00000495988 TRIM37O94972 964 aa23.98■■□□□ 1.43
APOBEC3A-204ENST00000495988 PARP4Q9UKK3 1724 aaKnown RBP23.98■■□□□ 1.43
APOBEC3A-204ENST00000495988 DISP2A7MBM2 1401 aa23.97■■□□□ 1.43
APOBEC3A-204ENST00000495988 TOM1L2Q6ZVM7 507 aa23.97■■□□□ 1.43
APOBEC3A-204ENST00000495988 ARHGEF25Q86VW2 580 aa23.97■■□□□ 1.43
APOBEC3A-204ENST00000495988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.97■■□□□ 1.43
APOBEC3A-204ENST00000495988 CD163L1Q9NR16 1453 aa23.97■■□□□ 1.43
APOBEC3A-204ENST00000495988 HDGFL2Q7Z4V5 671 aaPredicted RBP23.96■■□□□ 1.43
APOBEC3A-204ENST00000495988 AXIN2Q9Y2T1 843 aa23.96■■□□□ 1.43
APOBEC3A-204ENST00000495988 WDR17Q8IZU2 1322 aa23.94■■□□□ 1.42
APOBEC3A-204ENST00000495988 SLC12A5Q9H2X9 1139 aa23.94■■□□□ 1.42
APOBEC3A-204ENST00000495988 NFAT5O94916 1531 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms