RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 SCAF1Q9H7N4 1312 aaKnown RBP32.69■■■□□ 2.82
PPP1R3F-205ENST00000495799 TNNT2P45379 298 aaPredicted RBP32.68■■■□□ 2.82
PPP1R3F-205ENST00000495799 PHF8Q9UPP1 1060 aa32.68■■■□□ 2.82
PPP1R3F-205ENST00000495799 CFAP53Q96M91 514 aa32.67■■■□□ 2.82
PPP1R3F-205ENST00000495799 WDR43Q15061 677 aaKnown RBP eCLIP32.67■■■□□ 2.82
PPP1R3F-205ENST00000495799 COG3Q96JB2 828 aa32.67■■■□□ 2.82
PPP1R3F-205ENST00000495799 SSH2Q76I76 1423 aa32.66■■■□□ 2.82
PPP1R3F-205ENST00000495799 ATF3P18847 181 aa32.65■■■□□ 2.82
PPP1R3F-205ENST00000495799 KIF1AQ12756 1690 aa32.64■■■□□ 2.82
PPP1R3F-205ENST00000495799 NME9Q86XW9 330 aa32.64■■■□□ 2.82
PPP1R3F-205ENST00000495799 MSH6P52701 1360 aa32.64■■■□□ 2.82
PPP1R3F-205ENST00000495799 MTHFSP49914 203 aa32.61■■■□□ 2.81
PPP1R3F-205ENST00000495799 ESCO1Q5FWF5 840 aa32.61■■■□□ 2.81
PPP1R3F-205ENST00000495799 CADPS2Q86UW7 1296 aa32.61■■■□□ 2.81
PPP1R3F-205ENST00000495799 LRRC7Q96NW7 1537 aa32.6■■■□□ 2.81
PPP1R3F-205ENST00000495799 XIRP1Q702N8 1843 aaKnown RBP32.6■■■□□ 2.81
PPP1R3F-205ENST00000495799 C1orf167Q5SNV9 1468 aa32.59■■■□□ 2.81
PPP1R3F-205ENST00000495799 ZNF335Q9H4Z2 1342 aaPredicted RBP32.59■■■□□ 2.81
PPP1R3F-205ENST00000495799 AATKQ6ZMQ8 1374 aa32.58■■■□□ 2.81
PPP1R3F-205ENST00000495799 OVOS2A0A0J9YW53 1432 aa32.57■■■□□ 2.8
PPP1R3F-205ENST00000495799 OVOS2Q6IE36 1432 aa32.57■■■□□ 2.8
PPP1R3F-205ENST00000495799 BLMP54132 1417 aaPredicted RBP32.56■■■□□ 2.8
PPP1R3F-205ENST00000495799 ZBED9Q6R2W3 1325 aa32.56■■■□□ 2.8
PPP1R3F-205ENST00000495799 MST1RQ04912 1400 aa32.56■■■□□ 2.8
PPP1R3F-205ENST00000495799 USP31Q70CQ4 1352 aa32.55■■■□□ 2.8
PPP1R3F-205ENST00000495799 USP54Q70EL1 1684 aa32.53■■■□□ 2.8
PPP1R3F-205ENST00000495799 PIK3C2AO00443 1686 aa32.52■■■□□ 2.8
PPP1R3F-205ENST00000495799 SHPRHQ149N8 1683 aa32.52■■■□□ 2.8
PPP1R3F-205ENST00000495799 MAP2P11137 1827 aaKnown RBP32.51■■■□□ 2.8
PPP1R3F-205ENST00000495799 PSME1Q06323 249 aa32.51■■■□□ 2.79
PPP1R3F-205ENST00000495799 ZRANB1Q9UGI0 708 aa32.51■■■□□ 2.79
PPP1R3F-205ENST00000495799 ADAMTS8Q9UP79 889 aa32.51■■■□□ 2.79
PPP1R3F-205ENST00000495799 SMG6Q86US8 1419 aaKnown RBP32.5■■■□□ 2.79
PPP1R3F-205ENST00000495799 ORAI2Q96SN7 254 aa32.48■■■□□ 2.79
PPP1R3F-205ENST00000495799 POLKQ9UBT6 870 aa32.46■■■□□ 2.79
PPP1R3F-205ENST00000495799 NUDCQ9Y266 331 aa32.46■■■□□ 2.79
PPP1R3F-205ENST00000495799 PNPLA6Q8IY17 1366 aa32.46■■■□□ 2.79
PPP1R3F-205ENST00000495799 COL3A1P02461 1466 aaPredicted RBP32.46■■■□□ 2.79
PPP1R3F-205ENST00000495799 CDK12Q9NYV4 1490 aaPredicted RBP32.46■■■□□ 2.79
PPP1R3F-205ENST00000495799 PAK3O75914 559 aaPredicted RBP32.45■■■□□ 2.78
PPP1R3F-205ENST00000495799 ABTB2Q8N961 1025 aa32.42■■■□□ 2.78
PPP1R3F-205ENST00000495799 NLRP6P59044 892 aa32.41■■■□□ 2.78
PPP1R3F-205ENST00000495799 FOXO3O43524 673 aa32.4■■■□□ 2.78
PPP1R3F-205ENST00000495799 TRPM3Q9HCF6 1732 aaPredicted RBP32.39■■■□□ 2.78
PPP1R3F-205ENST00000495799 DIAPH1O60610 1272 aaKnown RBP32.39■■■□□ 2.78
PPP1R3F-205ENST00000495799 MARF1Q9Y4F3 1742 aaKnown RBP32.38■■■□□ 2.77
PPP1R3F-205ENST00000495799 PPM1GO15355 546 aaPredicted RBP32.36■■■□□ 2.77
PPP1R3F-205ENST00000495799 NPHP3Q7Z494 1330 aa32.36■■■□□ 2.77
PPP1R3F-205ENST00000495799 KRT28Q7Z3Y7 464 aa32.36■■■□□ 2.77
PPP1R3F-205ENST00000495799 EMILIN1Q9Y6C2 1016 aa32.36■■■□□ 2.77
PPP1R3F-205ENST00000495799 RRS1Q15050 365 aaKnown RBP32.33■■■□□ 2.77
PPP1R3F-205ENST00000495799 NGEFQ8N5V2 710 aa32.33■■■□□ 2.77
PPP1R3F-205ENST00000495799 U2AF1L5P0DN76 240 aaPredicted RBP32.32■■■□□ 2.76
PPP1R3F-205ENST00000495799 FBLN1P23142 703 aa32.32■■■□□ 2.76
PPP1R3F-205ENST00000495799 U2AF1Q01081 240 aaKnown RBP eCLIP32.32■■■□□ 2.76
PPP1R3F-205ENST00000495799 PNNQ9H307 717 aaKnown RBP32.31■■■□□ 2.76
PPP1R3F-205ENST00000495799 KIF24Q5T7B8 1368 aa32.31■■■□□ 2.76
PPP1R3F-205ENST00000495799 SBNO1A3KN83 1393 aa32.3■■■□□ 2.76
PPP1R3F-205ENST00000495799 U2SURPO15042 1029 aaKnown RBP32.3■■■□□ 2.76
PPP1R3F-205ENST00000495799 RUNDC1Q96C34 613 aa32.29■■■□□ 2.76
PPP1R3F-205ENST00000495799 SLAIN2Q9P270 581 aa32.29■■■□□ 2.76
PPP1R3F-205ENST00000495799 ALS2Q96Q42 1657 aa32.27■■■□□ 2.76
PPP1R3F-205ENST00000495799 PDE3BQ13370 1112 aa32.27■■■□□ 2.76
PPP1R3F-205ENST00000495799 NUTM2GQ5VZR2 741 aa32.27■■■□□ 2.76
PPP1R3F-205ENST00000495799 CCDC146Q8IYE0 955 aa32.27■■■□□ 2.76
PPP1R3F-205ENST00000495799 KCNH5Q8NCM2 988 aa32.27■■■□□ 2.76
PPP1R3F-205ENST00000495799 LTBP4Q8N2S1 1624 aa32.27■■■□□ 2.76
PPP1R3F-205ENST00000495799 FLT4P35916 1363 aa32.26■■■□□ 2.75
PPP1R3F-205ENST00000495799 XPCQ01831 940 aaPredicted RBP32.26■■■□□ 2.75
PPP1R3F-205ENST00000495799 BRINP3Q76B58 766 aa32.26■■■□□ 2.75
PPP1R3F-205ENST00000495799 PEAK1Q9H792 1746 aa32.25■■■□□ 2.75
PPP1R3F-205ENST00000495799 SOX12O15370 315 aa32.25■■■□□ 2.75
PPP1R3F-205ENST00000495799 MAP3K19Q56UN5 1328 aa32.25■■■□□ 2.75
PPP1R3F-205ENST00000495799 SLIT3O75094 1523 aa32.24■■■□□ 2.75
PPP1R3F-205ENST00000495799 PXDNQ92626 1479 aa32.23■■■□□ 2.75
PPP1R3F-205ENST00000495799 IL13P35225 146 aa32.22■■■□□ 2.75
PPP1R3F-205ENST00000495799 RTL1A6NKG5 1358 aa32.22■■■□□ 2.75
PPP1R3F-205ENST00000495799 AMPHP49418 695 aa32.21■■■□□ 2.75
PPP1R3F-205ENST00000495799 NFAT5O94916 1531 aa32.21■■■□□ 2.75
PPP1R3F-205ENST00000495799 APAF1O14727 1248 aa32.21■■■□□ 2.75
PPP1R3F-205ENST00000495799 SALL2Q9Y467 1007 aaPredicted RBP32.21■■■□□ 2.75
PPP1R3F-205ENST00000495799 TNS3Q68CZ2 1445 aa32.2■■■□□ 2.75
PPP1R3F-205ENST00000495799 LMOD2Q6P5Q4 547 aa32.2■■■□□ 2.74
PPP1R3F-205ENST00000495799 IQSEC2Q5JU85 1478 aa32.2■■■□□ 2.74
PPP1R3F-205ENST00000495799 USP19O94966 1318 aa32.19■■■□□ 2.74
PPP1R3F-205ENST00000495799 FCHSD2O94868 740 aa32.19■■■□□ 2.74
PPP1R3F-205ENST00000495799 NCBP3Q53F19 620 aaKnown RBP32.19■■■□□ 2.74
PPP1R3F-205ENST00000495799 LTN1O94822 1766 aa32.18■■■□□ 2.74
PPP1R3F-205ENST00000495799 AEBP2Q6ZN18 517 aaPredicted RBP32.18■■■□□ 2.74
PPP1R3F-205ENST00000495799 ARHGEF10O15013 1369 aa32.17■■■□□ 2.74
PPP1R3F-205ENST00000495799 MAPK8IP3Q9UPT6 1336 aa32.17■■■□□ 2.74
PPP1R3F-205ENST00000495799 NEFMP07197 916 aa32.17■■■□□ 2.74
PPP1R3F-205ENST00000495799 PHRF1Q9P1Y6 1649 aaKnown RBP32.17■■■□□ 2.74
PPP1R3F-205ENST00000495799 SENP3-EIF4A1A0A087X0R7 540 aa32.16■■■□□ 2.74
PPP1R3F-205ENST00000495799 EIF4A2Q14240 407 aaKnown RBP32.14■■■□□ 2.74
PPP1R3F-205ENST00000495799 NHSL1Q5SYE7 1610 aa32.14■■■□□ 2.74
PPP1R3F-205ENST00000495799 SPATA31A3Q5VYP0 1347 aa32.13■■■□□ 2.73
PPP1R3F-205ENST00000495799 HSP90AB2PQ58FF8 381 aa32.13■■■□□ 2.73
PPP1R3F-205ENST00000495799 TCP11L2Q8N4U5 519 aa32.13■■■□□ 2.73
PPP1R3F-205ENST00000495799 GCP02774 474 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms