RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
RFTN1-211ENST00000495666 EP400Q96L91 3159 aa15.44■□□□□ 0.06
RFTN1-211ENST00000495666 ZBTB7CA1YPR0 619 aa15.44■□□□□ 0.06
RFTN1-211ENST00000495666 FAM83GA6ND36 823 aa15.44■□□□□ 0.06
RFTN1-211ENST00000495666 BTG4Q9NY30 223 aa15.44■□□□□ 0.06
RFTN1-211ENST00000495666 TOPAZ1Q8N9V7 1692 aa15.44■□□□□ 0.06
RFTN1-211ENST00000495666 NRAPQ86VF7 1730 aa15.43■□□□□ 0.06
RFTN1-211ENST00000495666 CHRNA2Q15822 529 aa15.43■□□□□ 0.06
RFTN1-211ENST00000495666 L3MBTL2Q969R5 705 aa15.43■□□□□ 0.06
RFTN1-211ENST00000495666 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
RFTN1-211ENST00000495666 CRYBG1Q9Y4K1 1723 aa15.43■□□□□ 0.06
RFTN1-211ENST00000495666 PHRF1Q9P1Y6 1649 aaKnown RBP15.43■□□□□ 0.06
RFTN1-211ENST00000495666 COL14A1Q05707 1796 aaKnown RBP15.42■□□□□ 0.06
RFTN1-211ENST00000495666 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
RFTN1-211ENST00000495666 STAC3Q96MF2 364 aa15.42■□□□□ 0.06
RFTN1-211ENST00000495666 PRDM11Q9NQV5 511 aa15.42■□□□□ 0.06
RFTN1-211ENST00000495666 ZC3H6P61129 1189 aaKnown RBP15.41■□□□□ 0.06
RFTN1-211ENST00000495666 FAM98CQ17RN3 349 aaKnown RBP15.41■□□□□ 0.06
RFTN1-211ENST00000495666 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
RFTN1-211ENST00000495666 ACEP12821 1306 aa15.41■□□□□ 0.06
RFTN1-211ENST00000495666 CENPJQ9HC77 1338 aaPredicted RBP15.41■□□□□ 0.06
RFTN1-211ENST00000495666 TRPM1Q7Z4N2 1603 aa15.4■□□□□ 0.06
RFTN1-211ENST00000495666 VPS72Q15906 364 aa15.39■□□□□ 0.05
RFTN1-211ENST00000495666 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
RFTN1-211ENST00000495666 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
RFTN1-211ENST00000495666 PPIP5K1Q6PFW1 1433 aa15.39■□□□□ 0.05
RFTN1-211ENST00000495666 KIAA0232Q92628 1395 aa15.38■□□□□ 0.05
RFTN1-211ENST00000495666 ROCK2O75116 1388 aaKnown RBP15.37■□□□□ 0.05
RFTN1-211ENST00000495666 NBPF8Q3BBV2 869 aa15.36■□□□□ 0.05
RFTN1-211ENST00000495666 DEFB132Q7Z7B7 95 aa15.36■□□□□ 0.05
RFTN1-211ENST00000495666 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
RFTN1-211ENST00000495666 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
RFTN1-211ENST00000495666 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
RFTN1-211ENST00000495666 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
RFTN1-211ENST00000495666 NRKQ7Z2Y5 1582 aa15.34■□□□□ 0.05
RFTN1-211ENST00000495666 SOX12O15370 315 aa15.34■□□□□ 0.05
RFTN1-211ENST00000495666 CABP1Q9NZU7 370 aa15.33■□□□□ 0.04
RFTN1-211ENST00000495666 EVA1CP58658 441 aa15.32■□□□□ 0.04
RFTN1-211ENST00000495666 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
RFTN1-211ENST00000495666 POLR3AO14802 1390 aaPredicted RBP15.32■□□□□ 0.04
RFTN1-211ENST00000495666 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
RFTN1-211ENST00000495666 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
RFTN1-211ENST00000495666 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
RFTN1-211ENST00000495666 EVC2Q86UK5 1308 aa15.29■□□□□ 0.04
RFTN1-211ENST00000495666 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
RFTN1-211ENST00000495666 PLEKHG3A1L390 1219 aa15.28■□□□□ 0.04
RFTN1-211ENST00000495666 NLRP6P59044 892 aa15.28■□□□□ 0.04
RFTN1-211ENST00000495666 PIK3C2AO00443 1686 aa15.28■□□□□ 0.04
RFTN1-211ENST00000495666 LARP1Q6PKG0 1096 aaKnown RBP15.27■□□□□ 0.04
RFTN1-211ENST00000495666 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
RFTN1-211ENST00000495666 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.03
RFTN1-211ENST00000495666 USP6P35125 1406 aa15.26■□□□□ 0.03
RFTN1-211ENST00000495666 CAMTA1Q9Y6Y1 1673 aa15.26■□□□□ 0.03
RFTN1-211ENST00000495666 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
RFTN1-211ENST00000495666 CARD11Q9BXL7 1154 aa15.26■□□□□ 0.03
RFTN1-211ENST00000495666 AKAP12Q02952 1782 aa15.26■□□□□ 0.03
RFTN1-211ENST00000495666 RGPD1P0DJD0 1748 aa15.26■□□□□ 0.03
RFTN1-211ENST00000495666 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
RFTN1-211ENST00000495666 SPATA31A1Q5TZJ5 1347 aa15.25■□□□□ 0.03
RFTN1-211ENST00000495666 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
RFTN1-211ENST00000495666 GCP02774 474 aa15.25■□□□□ 0.03
RFTN1-211ENST00000495666 RGPD5Q99666 1765 aa15.24■□□□□ 0.03
RFTN1-211ENST00000495666 EN1Q05925 392 aaPredicted RBP15.24■□□□□ 0.03
RFTN1-211ENST00000495666 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
RFTN1-211ENST00000495666 LMO7Q8WWI1 1683 aa15.24■□□□□ 0.03
RFTN1-211ENST00000495666 USP19O94966 1318 aa15.23■□□□□ 0.03
RFTN1-211ENST00000495666 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
RFTN1-211ENST00000495666 BAG6P46379 1132 aa15.23■□□□□ 0.03
RFTN1-211ENST00000495666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.23■□□□□ 0.03
RFTN1-211ENST00000495666 TNS1Q9HBL0 1735 aaKnown RBP15.23■□□□□ 0.03
RFTN1-211ENST00000495666 SRCAPQ6ZRS2 3230 aa15.22■□□□□ 0.03
RFTN1-211ENST00000495666 TRIM37O94972 964 aa15.22■□□□□ 0.03
RFTN1-211ENST00000495666 PDE3BQ13370 1112 aa15.21■□□□□ 0.03
RFTN1-211ENST00000495666 KTN1Q86UP2 1357 aaKnown RBP15.21■□□□□ 0.02
RFTN1-211ENST00000495666 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
RFTN1-211ENST00000495666 CSB-PGBD3P0DP91 1061 aa15.19■□□□□ 0.02
RFTN1-211ENST00000495666 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
RFTN1-211ENST00000495666 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
RFTN1-211ENST00000495666 MON2Q7Z3U7 1717 aa15.19■□□□□ 0.02
RFTN1-211ENST00000495666 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
RFTN1-211ENST00000495666 SLIT3O75094 1523 aa15.18■□□□□ 0.02
RFTN1-211ENST00000495666 EZH2Q15910 746 aaKnown RBP15.18■□□□□ 0.02
RFTN1-211ENST00000495666 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
RFTN1-211ENST00000495666 CPDO75976 1380 aa15.18■□□□□ 0.02
RFTN1-211ENST00000495666 APBA3O96018 575 aa15.16■□□□□ 0.02
RFTN1-211ENST00000495666 CRB1P82279 1406 aa15.16■□□□□ 0.02
RFTN1-211ENST00000495666 CPSF1Q10570 1443 aaKnown RBP15.16■□□□□ 0.02
RFTN1-211ENST00000495666 WNK3Q9BYP7 1800 aa15.15■□□□□ 0.02
RFTN1-211ENST00000495666 LRRC37A3O60309 1634 aa15.15■□□□□ 0.02
RFTN1-211ENST00000495666 R3HDM1Q15032 1099 aaKnown RBP15.15■□□□□ 0.02
RFTN1-211ENST00000495666 NME9Q86XW9 330 aa15.15■□□□□ 0.02
RFTN1-211ENST00000495666 LTN1O94822 1766 aa15.15■□□□□ 0.02
RFTN1-211ENST00000495666 COL18A1P39060 1754 aa15.15■□□□□ 0.02
RFTN1-211ENST00000495666 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
RFTN1-211ENST00000495666 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
RFTN1-211ENST00000495666 SLC12A5Q9H2X9 1139 aa15.14■□□□□ 0.01
RFTN1-211ENST00000495666 AXIN2Q9Y2T1 843 aa15.14■□□□□ 0.01
RFTN1-211ENST00000495666 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
RFTN1-211ENST00000495666 BARGINQ6ZT62 677 aa15.13■□□□□ 0.01
RFTN1-211ENST00000495666 HDGFL2Q7Z4V5 671 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms