RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 PPIP5K1Q6PFW1 1433 aa24.62■■□□□ 1.53
CTNS-207ENST00000495445 FAM83GA6ND36 823 aa24.62■■□□□ 1.53
CTNS-207ENST00000495445 PAK3O75914 559 aaPredicted RBP24.62■■□□□ 1.53
CTNS-207ENST00000495445 ABCA3Q99758 1704 aa24.61■■□□□ 1.53
CTNS-207ENST00000495445 HAP1P54257 671 aaPredicted RBP24.61■■□□□ 1.53
CTNS-207ENST00000495445 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
CTNS-207ENST00000495445 CABP1Q9NZU7 370 aa24.61■■□□□ 1.53
CTNS-207ENST00000495445 SBNO2Q9Y2G9 1366 aa24.6■■□□□ 1.53
CTNS-207ENST00000495445 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
CTNS-207ENST00000495445 PLEKHG5O94827 1062 aa24.58■■□□□ 1.53
CTNS-207ENST00000495445 GJD4Q96KN9 370 aaPredicted RBP24.58■■□□□ 1.53
CTNS-207ENST00000495445 RGS12O14924 1447 aa24.58■■□□□ 1.53
CTNS-207ENST00000495445 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.58■■□□□ 1.52
CTNS-207ENST00000495445 BRD4O60885 1362 aaPredicted RBP24.57■■□□□ 1.52
CTNS-207ENST00000495445 CRYBG1Q9Y4K1 1723 aa24.56■■□□□ 1.52
CTNS-207ENST00000495445 TIMELESSQ9UNS1 1208 aa24.55■■□□□ 1.52
CTNS-207ENST00000495445 VPS72Q15906 364 aa24.54■■□□□ 1.52
CTNS-207ENST00000495445 UPF1Q92900 1129 aaKnown RBP eCLIP24.54■■□□□ 1.52
CTNS-207ENST00000495445 SSH2Q76I76 1423 aa24.52■■□□□ 1.52
CTNS-207ENST00000495445 NWD2Q9ULI1 1742 aa24.52■■□□□ 1.52
CTNS-207ENST00000495445 ABTB2Q8N961 1025 aa24.52■■□□□ 1.52
CTNS-207ENST00000495445 ZNF692Q9BU19 519 aaPredicted RBP24.51■■□□□ 1.51
CTNS-207ENST00000495445 USP6P35125 1406 aa24.51■■□□□ 1.51
CTNS-207ENST00000495445 NUTM2GQ5VZR2 741 aa24.5■■□□□ 1.51
CTNS-207ENST00000495445 ATAD2Q6PL18 1390 aa24.5■■□□□ 1.51
CTNS-207ENST00000495445 PLCH1Q4KWH8 1693 aa24.5■■□□□ 1.51
CTNS-207ENST00000495445 ONECUT3O60422 494 aaPredicted RBP24.49■■□□□ 1.51
CTNS-207ENST00000495445 PUS7Q96PZ0 661 aaKnown RBP24.49■■□□□ 1.51
CTNS-207ENST00000495445 BTG4Q9NY30 223 aa24.49■■□□□ 1.51
CTNS-207ENST00000495445 USP19O94966 1318 aa24.49■■□□□ 1.51
CTNS-207ENST00000495445 GLI3P10071 1580 aa24.48■■□□□ 1.51
CTNS-207ENST00000495445 COL14A1Q05707 1796 aaKnown RBP24.48■■□□□ 1.51
CTNS-207ENST00000495445 NLRP13Q86W25 1043 aa24.48■■□□□ 1.51
CTNS-207ENST00000495445 TESK2Q96S53 571 aa24.48■■□□□ 1.51
CTNS-207ENST00000495445 CPSF1Q10570 1443 aaKnown RBP24.47■■□□□ 1.51
CTNS-207ENST00000495445 ST20-MTHFSA0A0A6YYL1 179 aa24.46■■□□□ 1.51
CTNS-207ENST00000495445 KIAA0232Q92628 1395 aa24.45■■□□□ 1.5
CTNS-207ENST00000495445 PRDM11Q9NQV5 511 aa24.45■■□□□ 1.5
CTNS-207ENST00000495445 PHRF1Q9P1Y6 1649 aaKnown RBP24.45■■□□□ 1.5
CTNS-207ENST00000495445 GCP02774 474 aa24.44■■□□□ 1.5
CTNS-207ENST00000495445 ZC3H6P61129 1189 aaKnown RBP24.44■■□□□ 1.5
CTNS-207ENST00000495445 NRAPQ86VF7 1730 aa24.44■■□□□ 1.5
CTNS-207ENST00000495445 EP400Q96L91 3159 aa24.43■■□□□ 1.5
CTNS-207ENST00000495445 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
CTNS-207ENST00000495445 CPDO75976 1380 aa24.42■■□□□ 1.5
CTNS-207ENST00000495445 TTC21BQ7Z4L5 1316 aa24.42■■□□□ 1.5
CTNS-207ENST00000495445 NLRP6P59044 892 aa24.41■■□□□ 1.5
CTNS-207ENST00000495445 CHRNA2Q15822 529 aa24.41■■□□□ 1.5
CTNS-207ENST00000495445 AKAP12Q02952 1782 aa24.41■■□□□ 1.5
CTNS-207ENST00000495445 NRKQ7Z2Y5 1582 aa24.39■■□□□ 1.5
CTNS-207ENST00000495445 SEPT12Q8IYM1 358 aa24.39■■□□□ 1.49
CTNS-207ENST00000495445 SLC12A5Q9H2X9 1139 aa24.39■■□□□ 1.49
CTNS-207ENST00000495445 CD163L1Q9NR16 1453 aa24.38■■□□□ 1.49
CTNS-207ENST00000495445 SPATA31A5Q5VU36 1347 aa24.38■■□□□ 1.49
CTNS-207ENST00000495445 SPATA31A7Q8IWB4 1347 aa24.38■■□□□ 1.49
CTNS-207ENST00000495445 TTC21AQ8NDW8 1320 aa24.38■■□□□ 1.49
CTNS-207ENST00000495445 CCDC9Q9Y3X0 531 aaKnown RBP24.38■■□□□ 1.49
CTNS-207ENST00000495445 KTN1Q86UP2 1357 aaKnown RBP24.38■■□□□ 1.49
CTNS-207ENST00000495445 PIK3C2AO00443 1686 aa24.36■■□□□ 1.49
CTNS-207ENST00000495445 SLIT3O75094 1523 aa24.35■■□□□ 1.49
CTNS-207ENST00000495445 USP47Q96K76 1375 aa24.35■■□□□ 1.49
CTNS-207ENST00000495445 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
CTNS-207ENST00000495445 CAMTA1Q9Y6Y1 1673 aa24.34■■□□□ 1.49
CTNS-207ENST00000495445 CCER1Q8TC90 406 aaPredicted RBP24.33■■□□□ 1.49
CTNS-207ENST00000495445 SPATA31A1Q5TZJ5 1347 aa24.33■■□□□ 1.48
CTNS-207ENST00000495445 LMO7Q8WWI1 1683 aa24.32■■□□□ 1.48
CTNS-207ENST00000495445 FAM98CQ17RN3 349 aaKnown RBP24.32■■□□□ 1.48
CTNS-207ENST00000495445 MON2Q7Z3U7 1717 aa24.32■■□□□ 1.48
CTNS-207ENST00000495445 HDGFL2Q7Z4V5 671 aaPredicted RBP24.31■■□□□ 1.48
CTNS-207ENST00000495445 BRWD3Q6RI45 1802 aa24.31■■□□□ 1.48
CTNS-207ENST00000495445 USP31Q70CQ4 1352 aa24.3■■□□□ 1.48
CTNS-207ENST00000495445 TERF2IPQ9NYB0 399 aa24.3■■□□□ 1.48
CTNS-207ENST00000495445 AATKQ6ZMQ8 1374 aa24.29■■□□□ 1.48
CTNS-207ENST00000495445 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
CTNS-207ENST00000495445 EVA1CP58658 441 aa24.29■■□□□ 1.48
CTNS-207ENST00000495445 ARHGEF25Q86VW2 580 aa24.29■■□□□ 1.48
CTNS-207ENST00000495445 CCDC125Q86Z20 511 aa24.29■■□□□ 1.48
CTNS-207ENST00000495445 KCNH5Q8NCM2 988 aa24.29■■□□□ 1.48
CTNS-207ENST00000495445 STRN4Q9NRL3 753 aa24.29■■□□□ 1.48
CTNS-207ENST00000495445 TMF1P82094 1093 aa24.28■■□□□ 1.48
CTNS-207ENST00000495445 KRT27Q7Z3Y8 459 aa24.28■■□□□ 1.48
CTNS-207ENST00000495445 A0A1W2PP64 1363 aa24.28■■□□□ 1.48
CTNS-207ENST00000495445 LARP1Q6PKG0 1096 aaKnown RBP24.27■■□□□ 1.48
CTNS-207ENST00000495445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.27■■□□□ 1.48
CTNS-207ENST00000495445 ZRANB1Q9UGI0 708 aa24.27■■□□□ 1.48
CTNS-207ENST00000495445 EDC4Q6P2E9 1401 aaKnown RBP24.27■■□□□ 1.48
CTNS-207ENST00000495445 COL18A1P39060 1754 aa24.25■■□□□ 1.47
CTNS-207ENST00000495445 BARGINQ6ZT62 677 aa24.25■■□□□ 1.47
CTNS-207ENST00000495445 NME9Q86XW9 330 aa24.25■■□□□ 1.47
CTNS-207ENST00000495445 AXIN2Q9Y2T1 843 aa24.25■■□□□ 1.47
CTNS-207ENST00000495445 COL5A2P05997 1499 aaPredicted RBP24.24■■□□□ 1.47
CTNS-207ENST00000495445 USP54Q70EL1 1684 aa24.23■■□□□ 1.47
CTNS-207ENST00000495445 THSD7AQ9UPZ6 1657 aa24.23■■□□□ 1.47
CTNS-207ENST00000495445 NFAT5O94916 1531 aa24.22■■□□□ 1.47
CTNS-207ENST00000495445 CDCA8Q53HL2 280 aa24.21■■□□□ 1.47
CTNS-207ENST00000495445 TCP11L2Q8N4U5 519 aa24.21■■□□□ 1.47
CTNS-207ENST00000495445 THRAP3Q9Y2W1 955 aaKnown RBP24.21■■□□□ 1.47
CTNS-207ENST00000495445 ANKRD36BQ8N2N9 1353 aa24.18■■□□□ 1.46
CTNS-207ENST00000495445 A0A0G2JS52 829 aa24.18■■□□□ 1.46
CTNS-207ENST00000495445 ZBTB7CA1YPR0 619 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms