RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 TRPC5Q9UL62 973 aaPredicted RBP17.3■□□□□ 0.36
SMIM11A-207ENST00000495363 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
SMIM11A-207ENST00000495363 RBM6P78332 1123 aaKnown RBP17.29■□□□□ 0.36
SMIM11A-207ENST00000495363 ABTB2Q8N961 1025 aa17.29■□□□□ 0.36
SMIM11A-207ENST00000495363 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
SMIM11A-207ENST00000495363 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
SMIM11A-207ENST00000495363 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
SMIM11A-207ENST00000495363 TMC1Q8TDI8 760 aa17.27■□□□□ 0.36
SMIM11A-207ENST00000495363 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
SMIM11A-207ENST00000495363 SBNO2Q9Y2G9 1366 aa17.27■□□□□ 0.35
SMIM11A-207ENST00000495363 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
SMIM11A-207ENST00000495363 BCL9LQ86UU0 1499 aa17.25■□□□□ 0.35
SMIM11A-207ENST00000495363 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
SMIM11A-207ENST00000495363 UNC5CLQ8IV45 518 aa17.25■□□□□ 0.35
SMIM11A-207ENST00000495363 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
SMIM11A-207ENST00000495363 USP47Q96K76 1375 aa17.25■□□□□ 0.35
SMIM11A-207ENST00000495363 USP6P35125 1406 aa17.24■□□□□ 0.35
SMIM11A-207ENST00000495363 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
SMIM11A-207ENST00000495363 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
SMIM11A-207ENST00000495363 ATRNO75882 1429 aa17.23■□□□□ 0.35
SMIM11A-207ENST00000495363 SLIT2O94813 1529 aa17.23■□□□□ 0.35
SMIM11A-207ENST00000495363 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
SMIM11A-207ENST00000495363 TESK2Q96S53 571 aa17.22■□□□□ 0.35
SMIM11A-207ENST00000495363 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
SMIM11A-207ENST00000495363 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
SMIM11A-207ENST00000495363 RGS12O14924 1447 aa17.21■□□□□ 0.35
SMIM11A-207ENST00000495363 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
SMIM11A-207ENST00000495363 NLRP6P59044 892 aa17.21■□□□□ 0.35
SMIM11A-207ENST00000495363 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
SMIM11A-207ENST00000495363 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
SMIM11A-207ENST00000495363 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
SMIM11A-207ENST00000495363 KIAA0232Q92628 1395 aa17.2■□□□□ 0.34
SMIM11A-207ENST00000495363 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
SMIM11A-207ENST00000495363 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
SMIM11A-207ENST00000495363 CDK12Q9NYV4 1490 aaPredicted RBP17.19■□□□□ 0.34
SMIM11A-207ENST00000495363 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
SMIM11A-207ENST00000495363 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
SMIM11A-207ENST00000495363 PLCH1Q4KWH8 1693 aa17.19■□□□□ 0.34
SMIM11A-207ENST00000495363 TMF1P82094 1093 aa17.18■□□□□ 0.34
SMIM11A-207ENST00000495363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMIM11A-207ENST00000495363 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
SMIM11A-207ENST00000495363 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
SMIM11A-207ENST00000495363 SOX12O15370 315 aa17.17■□□□□ 0.34
SMIM11A-207ENST00000495363 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
SMIM11A-207ENST00000495363 VPS72Q15906 364 aa17.17■□□□□ 0.34
SMIM11A-207ENST00000495363 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 SSH2Q76I76 1423 aa17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 A0A0G2JS52 829 aa17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 GCP02774 474 aa17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 MYT1Q01538 1121 aa17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 USP19O94966 1318 aa17.16■□□□□ 0.34
SMIM11A-207ENST00000495363 TERF2IPQ9NYB0 399 aa17.15■□□□□ 0.34
SMIM11A-207ENST00000495363 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
SMIM11A-207ENST00000495363 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
SMIM11A-207ENST00000495363 NWD2Q9ULI1 1742 aa17.14■□□□□ 0.33
SMIM11A-207ENST00000495363 PUS7Q96PZ0 661 aaKnown RBP17.14■□□□□ 0.33
SMIM11A-207ENST00000495363 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
SMIM11A-207ENST00000495363 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
SMIM11A-207ENST00000495363 EVA1CP58658 441 aa17.13■□□□□ 0.33
SMIM11A-207ENST00000495363 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
SMIM11A-207ENST00000495363 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
SMIM11A-207ENST00000495363 GLI3P10071 1580 aa17.13■□□□□ 0.33
SMIM11A-207ENST00000495363 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
SMIM11A-207ENST00000495363 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
SMIM11A-207ENST00000495363 NME9Q86XW9 330 aa17.12■□□□□ 0.33
SMIM11A-207ENST00000495363 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
SMIM11A-207ENST00000495363 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
SMIM11A-207ENST00000495363 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
SMIM11A-207ENST00000495363 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMIM11A-207ENST00000495363 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
SMIM11A-207ENST00000495363 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
SMIM11A-207ENST00000495363 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
SMIM11A-207ENST00000495363 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMIM11A-207ENST00000495363 KCNH5Q8NCM2 988 aa17.09■□□□□ 0.33
SMIM11A-207ENST00000495363 CPDO75976 1380 aa17.09■□□□□ 0.33
SMIM11A-207ENST00000495363 NINLQ9Y2I6 1382 aa17.09■□□□□ 0.33
SMIM11A-207ENST00000495363 SLIT3O75094 1523 aa17.08■□□□□ 0.32
SMIM11A-207ENST00000495363 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
SMIM11A-207ENST00000495363 SPATA31A5Q5VU36 1347 aa17.08■□□□□ 0.32
SMIM11A-207ENST00000495363 SPATA31A7Q8IWB4 1347 aa17.08■□□□□ 0.32
SMIM11A-207ENST00000495363 HSPA5P11021 654 aaKnown RBP17.08■□□□□ 0.32
SMIM11A-207ENST00000495363 LARP1Q6PKG0 1096 aaKnown RBP17.07■□□□□ 0.32
SMIM11A-207ENST00000495363 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
SMIM11A-207ENST00000495363 ANKRD36BQ8N2N9 1353 aa17.05■□□□□ 0.32
SMIM11A-207ENST00000495363 USP31Q70CQ4 1352 aa17.04■□□□□ 0.32
SMIM11A-207ENST00000495363 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
SMIM11A-207ENST00000495363 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
SMIM11A-207ENST00000495363 AATKQ6ZMQ8 1374 aa17.03■□□□□ 0.32
SMIM11A-207ENST00000495363 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
SMIM11A-207ENST00000495363 KRT27Q7Z3Y8 459 aa17.03■□□□□ 0.32
SMIM11A-207ENST00000495363 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
SMIM11A-207ENST00000495363 COL5A2P05997 1499 aaPredicted RBP17.02■□□□□ 0.32
SMIM11A-207ENST00000495363 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
SMIM11A-207ENST00000495363 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
SMIM11A-207ENST00000495363 COG3Q96JB2 828 aa17.02■□□□□ 0.32
SMIM11A-207ENST00000495363 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
SMIM11A-207ENST00000495363 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms