RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 TMC1Q8TDI8 760 aa19.04■□□□□ 0.64
FDPS-219ENST00000495308 ARHGEF10O15013 1369 aa19.04■□□□□ 0.64
FDPS-219ENST00000495308 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
FDPS-219ENST00000495308 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
FDPS-219ENST00000495308 MEX3CQ5U5Q3 659 aaKnown RBP19.03■□□□□ 0.64
FDPS-219ENST00000495308 PIK3C2AO00443 1686 aa19.03■□□□□ 0.64
FDPS-219ENST00000495308 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
FDPS-219ENST00000495308 CPSF1Q10570 1443 aaKnown RBP19.01■□□□□ 0.63
FDPS-219ENST00000495308 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
FDPS-219ENST00000495308 CABLES1Q8TDN4 633 aa19.01■□□□□ 0.63
FDPS-219ENST00000495308 PUS7Q96PZ0 661 aaKnown RBP19.01■□□□□ 0.63
FDPS-219ENST00000495308 SLC12A5Q9H2X9 1139 aa19.01■□□□□ 0.63
FDPS-219ENST00000495308 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
FDPS-219ENST00000495308 NUTM2GQ5VZR2 741 aa18.99■□□□□ 0.63
FDPS-219ENST00000495308 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
FDPS-219ENST00000495308 A0A1W2PP64 1363 aa18.98■□□□□ 0.63
FDPS-219ENST00000495308 C8orf37Q96NL8 207 aa18.98■□□□□ 0.63
FDPS-219ENST00000495308 PLCH1Q4KWH8 1693 aa18.97■□□□□ 0.63
FDPS-219ENST00000495308 BRD4O60885 1362 aaPredicted RBP18.96■□□□□ 0.63
FDPS-219ENST00000495308 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
FDPS-219ENST00000495308 HAP1P54257 671 aaPredicted RBP18.96■□□□□ 0.63
FDPS-219ENST00000495308 CDCA8Q53HL2 280 aa18.96■□□□□ 0.63
FDPS-219ENST00000495308 ABTB2Q8N961 1025 aa18.96■□□□□ 0.63
FDPS-219ENST00000495308 ZNF692Q9BU19 519 aaPredicted RBP18.96■□□□□ 0.63
FDPS-219ENST00000495308 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
FDPS-219ENST00000495308 HDGFL2Q7Z4V5 671 aaPredicted RBP18.95■□□□□ 0.62
FDPS-219ENST00000495308 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
FDPS-219ENST00000495308 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
FDPS-219ENST00000495308 AFF2P51816 1311 aa18.94■□□□□ 0.62
FDPS-219ENST00000495308 USP54Q70EL1 1684 aa18.93■□□□□ 0.62
FDPS-219ENST00000495308 TERF2IPQ9NYB0 399 aa18.93■□□□□ 0.62
FDPS-219ENST00000495308 EDC4Q6P2E9 1401 aaKnown RBP18.92■□□□□ 0.62
FDPS-219ENST00000495308 KIF20BQ96Q89 1820 aa18.92■□□□□ 0.62
FDPS-219ENST00000495308 ANKRD36BQ8N2N9 1353 aa18.92■□□□□ 0.62
FDPS-219ENST00000495308 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
FDPS-219ENST00000495308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.91■□□□□ 0.62
FDPS-219ENST00000495308 NGLY1Q96IV0 654 aa18.91■□□□□ 0.62
FDPS-219ENST00000495308 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
FDPS-219ENST00000495308 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
FDPS-219ENST00000495308 SLIT3O75094 1523 aa18.9■□□□□ 0.62
FDPS-219ENST00000495308 NLRP6P59044 892 aa18.9■□□□□ 0.62
FDPS-219ENST00000495308 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.9■□□□□ 0.62
FDPS-219ENST00000495308 NWD2Q9ULI1 1742 aa18.9■□□□□ 0.62
FDPS-219ENST00000495308 USP19O94966 1318 aa18.9■□□□□ 0.62
FDPS-219ENST00000495308 POTEAQ6S8J7 498 aa18.89■□□□□ 0.61
FDPS-219ENST00000495308 NLRP13Q86W25 1043 aa18.89■□□□□ 0.61
FDPS-219ENST00000495308 NRAPQ86VF7 1730 aa18.88■□□□□ 0.61
FDPS-219ENST00000495308 NME9Q86XW9 330 aa18.88■□□□□ 0.61
FDPS-219ENST00000495308 ZRANB1Q9UGI0 708 aa18.88■□□□□ 0.61
FDPS-219ENST00000495308 SLIT2O94813 1529 aa18.86■□□□□ 0.61
FDPS-219ENST00000495308 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
FDPS-219ENST00000495308 ZNF772Q68DY9 489 aaPredicted RBP18.86■□□□□ 0.61
FDPS-219ENST00000495308 USP21Q9UK80 565 aa18.86■□□□□ 0.61
FDPS-219ENST00000495308 BCL9LQ86UU0 1499 aa18.85■□□□□ 0.61
FDPS-219ENST00000495308 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
FDPS-219ENST00000495308 ZC3H6P61129 1189 aaKnown RBP18.85■□□□□ 0.61
FDPS-219ENST00000495308 ILDR2Q71H61 639 aa18.85■□□□□ 0.61
FDPS-219ENST00000495308 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
FDPS-219ENST00000495308 LTN1O94822 1766 aa18.85■□□□□ 0.61
FDPS-219ENST00000495308 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
FDPS-219ENST00000495308 NFAT5O94916 1531 aa18.84■□□□□ 0.61
FDPS-219ENST00000495308 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.61
FDPS-219ENST00000495308 RGPD5Q99666 1765 aa18.83■□□□□ 0.61
FDPS-219ENST00000495308 USP31Q70CQ4 1352 aa18.83■□□□□ 0.61
FDPS-219ENST00000495308 LMO7Q8WWI1 1683 aa18.83■□□□□ 0.61
FDPS-219ENST00000495308 GCP02774 474 aa18.83■□□□□ 0.6
FDPS-219ENST00000495308 PRDM11Q9NQV5 511 aa18.83■□□□□ 0.6
FDPS-219ENST00000495308 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.6
FDPS-219ENST00000495308 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.6
FDPS-219ENST00000495308 SOX12O15370 315 aa18.82■□□□□ 0.6
FDPS-219ENST00000495308 CHRNA2Q15822 529 aa18.82■□□□□ 0.6
FDPS-219ENST00000495308 CARD14Q9BXL6 1004 aa18.82■□□□□ 0.6
FDPS-219ENST00000495308 COL18A1P39060 1754 aa18.81■□□□□ 0.6
FDPS-219ENST00000495308 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
FDPS-219ENST00000495308 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
FDPS-219ENST00000495308 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
FDPS-219ENST00000495308 ATRNO75882 1429 aa18.8■□□□□ 0.6
FDPS-219ENST00000495308 ANKRD26Q9UPS8 1709 aa18.8■□□□□ 0.6
FDPS-219ENST00000495308 CPDO75976 1380 aa18.8■□□□□ 0.6
FDPS-219ENST00000495308 CCDC7Q96M83 1385 aa18.79■□□□□ 0.6
FDPS-219ENST00000495308 WASHC2AQ641Q2 1341 aa18.78■□□□□ 0.6
FDPS-219ENST00000495308 GLI3P10071 1580 aa18.78■□□□□ 0.6
FDPS-219ENST00000495308 UNC5CLQ8IV45 518 aa18.78■□□□□ 0.6
FDPS-219ENST00000495308 GGNBP2Q9H3C7 697 aa18.78■□□□□ 0.6
FDPS-219ENST00000495308 CAMTA1Q9Y6Y1 1673 aa18.78■□□□□ 0.6
FDPS-219ENST00000495308 KCNH5Q8NCM2 988 aa18.77■□□□□ 0.6
FDPS-219ENST00000495308 PANK3Q9H999 370 aa18.77■□□□□ 0.6
FDPS-219ENST00000495308 TRPC5Q9UL62 973 aaPredicted RBP18.77■□□□□ 0.6
FDPS-219ENST00000495308 FYB1O15117 783 aa18.76■□□□□ 0.59
FDPS-219ENST00000495308 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
FDPS-219ENST00000495308 COG3Q96JB2 828 aa18.76■□□□□ 0.59
FDPS-219ENST00000495308 RXRBP28702 533 aa18.74■□□□□ 0.59
FDPS-219ENST00000495308 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
FDPS-219ENST00000495308 ARHGEF25Q86VW2 580 aa18.73■□□□□ 0.59
FDPS-219ENST00000495308 STRN4Q9NRL3 753 aa18.73■□□□□ 0.59
FDPS-219ENST00000495308 COL5A2P05997 1499 aaPredicted RBP18.72■□□□□ 0.59
FDPS-219ENST00000495308 AATKQ6ZMQ8 1374 aa18.72■□□□□ 0.59
FDPS-219ENST00000495308 CCDC9Q9Y3X0 531 aaKnown RBP18.72■□□□□ 0.59
FDPS-219ENST00000495308 RGS12O14924 1447 aa18.72■□□□□ 0.59
FDPS-219ENST00000495308 ABCC6O95255 1503 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms