RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 NRAPQ86VF7 1730 aa20.94■□□□□ 0.94
VARS-228ENST00000495010 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
VARS-228ENST00000495010 TULP4Q9NRJ4 1543 aa20.93■□□□□ 0.94
VARS-228ENST00000495010 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
VARS-228ENST00000495010 EN1Q05925 392 aaPredicted RBP20.92■□□□□ 0.94
VARS-228ENST00000495010 SPATA31A5Q5VU36 1347 aa20.92■□□□□ 0.94
VARS-228ENST00000495010 SPATA31A7Q8IWB4 1347 aa20.92■□□□□ 0.94
VARS-228ENST00000495010 PRR36Q9H6K5 1346 aa20.92■□□□□ 0.94
VARS-228ENST00000495010 LRP5O75197 1615 aa20.92■□□□□ 0.94
VARS-228ENST00000495010 ALS2Q96Q42 1657 aa20.92■□□□□ 0.94
VARS-228ENST00000495010 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
VARS-228ENST00000495010 HRCP23327 699 aa20.9■□□□□ 0.94
VARS-228ENST00000495010 FAM182BQ5T319 152 aa20.9■□□□□ 0.94
VARS-228ENST00000495010 STAC3Q96MF2 364 aa20.89■□□□□ 0.93
VARS-228ENST00000495010 RGPD1P0DJD0 1748 aa20.89■□□□□ 0.93
VARS-228ENST00000495010 NUDT16Q96DE0 195 aaKnown RBP20.86■□□□□ 0.93
VARS-228ENST00000495010 STRN4Q9NRL3 753 aa20.86■□□□□ 0.93
VARS-228ENST00000495010 R3HDM1Q15032 1099 aaKnown RBP20.85■□□□□ 0.93
VARS-228ENST00000495010 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
VARS-228ENST00000495010 CHRNA2Q15822 529 aa20.84■□□□□ 0.93
VARS-228ENST00000495010 FAM196AQ6ZSG2 479 aa20.84■□□□□ 0.93
VARS-228ENST00000495010 SPATA31A1Q5TZJ5 1347 aa20.83■□□□□ 0.93
VARS-228ENST00000495010 EVA1CP58658 441 aa20.83■□□□□ 0.93
VARS-228ENST00000495010 ZC3H6P61129 1189 aaKnown RBP20.83■□□□□ 0.93
VARS-228ENST00000495010 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
VARS-228ENST00000495010 CRYBG1Q9Y4K1 1723 aa20.82■□□□□ 0.92
VARS-228ENST00000495010 EZH2Q15910 746 aaKnown RBP20.82■□□□□ 0.92
VARS-228ENST00000495010 NUTM2GQ5VZR2 741 aa20.82■□□□□ 0.92
VARS-228ENST00000495010 THSD7AQ9UPZ6 1657 aa20.82■□□□□ 0.92
VARS-228ENST00000495010 TRIM37O94972 964 aa20.81■□□□□ 0.92
VARS-228ENST00000495010 CDK19Q9BWU1 502 aa20.81■□□□□ 0.92
VARS-228ENST00000495010 USP35Q9P2H5 1018 aa20.81■□□□□ 0.92
VARS-228ENST00000495010 ATP7BP35670 1465 aa20.81■□□□□ 0.92
VARS-228ENST00000495010 DISP2A7MBM2 1401 aa20.8■□□□□ 0.92
VARS-228ENST00000495010 APBA3O96018 575 aa20.79■□□□□ 0.92
VARS-228ENST00000495010 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
VARS-228ENST00000495010 ARHGEF28Q8N1W1 1705 aaKnown RBP20.78■□□□□ 0.92
VARS-228ENST00000495010 CCDC61Q9Y6R9 512 aa20.77■□□□□ 0.92
VARS-228ENST00000495010 TNS1Q9HBL0 1735 aaKnown RBP20.77■□□□□ 0.92
VARS-228ENST00000495010 PHRF1Q9P1Y6 1649 aaKnown RBP20.77■□□□□ 0.92
VARS-228ENST00000495010 ACEP12821 1306 aa20.77■□□□□ 0.91
VARS-228ENST00000495010 NBPF8Q3BBV2 869 aa20.76■□□□□ 0.91
VARS-228ENST00000495010 ABTB2Q8N961 1025 aa20.76■□□□□ 0.91
VARS-228ENST00000495010 CAMKK2Q96RR4 588 aa20.76■□□□□ 0.91
VARS-228ENST00000495010 BARGINQ6ZT62 677 aa20.75■□□□□ 0.91
VARS-228ENST00000495010 PARD3Q8TEW0 1356 aa20.74■□□□□ 0.91
VARS-228ENST00000495010 POLR3AO14802 1390 aaPredicted RBP20.73■□□□□ 0.91
VARS-228ENST00000495010 SSH2Q76I76 1423 aa20.73■□□□□ 0.91
VARS-228ENST00000495010 NBPF14Q5TI25 921 aa20.73■□□□□ 0.91
VARS-228ENST00000495010 PLEKHG3A1L390 1219 aa20.72■□□□□ 0.91
VARS-228ENST00000495010 TCP11L2Q8N4U5 519 aa20.72■□□□□ 0.91
VARS-228ENST00000495010 LARP1Q6PKG0 1096 aaKnown RBP20.71■□□□□ 0.91
VARS-228ENST00000495010 NLRP13Q86W25 1043 aa20.71■□□□□ 0.91
VARS-228ENST00000495010 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
VARS-228ENST00000495010 THRAP3Q9Y2W1 955 aaKnown RBP20.69■□□□□ 0.9
VARS-228ENST00000495010 TOPAZ1Q8N9V7 1692 aa20.68■□□□□ 0.9
VARS-228ENST00000495010 CPDO75976 1380 aa20.68■□□□□ 0.9
VARS-228ENST00000495010 NRKQ7Z2Y5 1582 aa20.68■□□□□ 0.9
VARS-228ENST00000495010 CAMTA1Q9Y6Y1 1673 aa20.67■□□□□ 0.9
VARS-228ENST00000495010 ZBTB7CA1YPR0 619 aa20.67■□□□□ 0.9
VARS-228ENST00000495010 GCP02774 474 aa20.66■□□□□ 0.9
VARS-228ENST00000495010 PPIP5K1Q6PFW1 1433 aa20.65■□□□□ 0.9
VARS-228ENST00000495010 USP19O94966 1318 aa20.65■□□□□ 0.9
VARS-228ENST00000495010 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
VARS-228ENST00000495010 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.89
VARS-228ENST00000495010 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.89
VARS-228ENST00000495010 NBPF1Q3BBV0 1214 aa20.63■□□□□ 0.89
VARS-228ENST00000495010 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
VARS-228ENST00000495010 CENPJQ9HC77 1338 aaPredicted RBP20.62■□□□□ 0.89
VARS-228ENST00000495010 LMO7Q8WWI1 1683 aa20.62■□□□□ 0.89
VARS-228ENST00000495010 RREB1Q92766 1687 aa20.62■□□□□ 0.89
VARS-228ENST00000495010 BRD4O60885 1362 aaPredicted RBP20.61■□□□□ 0.89
VARS-228ENST00000495010 DCAF8L1A6NGE4 600 aa20.61■□□□□ 0.89
VARS-228ENST00000495010 NLRP6P59044 892 aa20.61■□□□□ 0.89
VARS-228ENST00000495010 SPON1Q9HCB6 807 aa20.6■□□□□ 0.89
VARS-228ENST00000495010 NUP188Q5SRE5 1749 aa20.6■□□□□ 0.89
VARS-228ENST00000495010 COL5A2P05997 1499 aaPredicted RBP20.6■□□□□ 0.89
VARS-228ENST00000495010 CRB1P82279 1406 aa20.6■□□□□ 0.89
VARS-228ENST00000495010 TOM1L2Q6ZVM7 507 aa20.58■□□□□ 0.89
VARS-228ENST00000495010 CABP1Q9NZU7 370 aa20.58■□□□□ 0.89
VARS-228ENST00000495010 OVOS2A0A0G2JMS6 1433 aa20.58■□□□□ 0.88
VARS-228ENST00000495010 OVOS2A0A0J9YW53 1432 aa20.58■□□□□ 0.88
VARS-228ENST00000495010 OVOS2Q6IE36 1432 aa20.58■□□□□ 0.88
VARS-228ENST00000495010 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.88
VARS-228ENST00000495010 KCNQ2O43526 872 aa20.57■□□□□ 0.88
VARS-228ENST00000495010 YY1P25490 414 aa20.57■□□□□ 0.88
VARS-228ENST00000495010 DDB1Q16531 1140 aa20.57■□□□□ 0.88
VARS-228ENST00000495010 AATKQ6ZMQ8 1374 aa20.56■□□□□ 0.88
VARS-228ENST00000495010 USP6P35125 1406 aa20.54■□□□□ 0.88
VARS-228ENST00000495010 PLSCR1O15162 318 aa20.53■□□□□ 0.88
VARS-228ENST00000495010 QRICH2Q9H0J4 1663 aa20.52■□□□□ 0.88
VARS-228ENST00000495010 CDCA7Q9BWT1 371 aaPredicted RBP20.51■□□□□ 0.87
VARS-228ENST00000495010 BCL11BQ9C0K0 894 aaPredicted RBP20.51■□□□□ 0.87
VARS-228ENST00000495010 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
VARS-228ENST00000495010 SLIT3O75094 1523 aa20.5■□□□□ 0.87
VARS-228ENST00000495010 CSB-PGBD3P0DP91 1061 aa20.5■□□□□ 0.87
VARS-228ENST00000495010 WDR17Q8IZU2 1322 aa20.5■□□□□ 0.87
VARS-228ENST00000495010 NINLQ9Y2I6 1382 aa20.49■□□□□ 0.87
VARS-228ENST00000495010 KCNH5Q8NCM2 988 aa20.49■□□□□ 0.87
VARS-228ENST00000495010 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms