RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 ABCC6O95255 1503 aa11.24□□□□□ -0.61
RAF1-212ENST00000494557 B4GALNT3Q6L9W6 998 aa11.23□□□□□ -0.61
RAF1-212ENST00000494557 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
RAF1-212ENST00000494557 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
RAF1-212ENST00000494557 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
RAF1-212ENST00000494557 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
RAF1-212ENST00000494557 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
RAF1-212ENST00000494557 EXOC6Q8TAG9 804 aa11.22□□□□□ -0.61
RAF1-212ENST00000494557 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
RAF1-212ENST00000494557 BACH2Q9BYV9 841 aa11.22□□□□□ -0.61
RAF1-212ENST00000494557 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
RAF1-212ENST00000494557 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
RAF1-212ENST00000494557 PTPRUQ92729 1446 aa11.21□□□□□ -0.61
RAF1-212ENST00000494557 LTN1O94822 1766 aa11.21□□□□□ -0.62
RAF1-212ENST00000494557 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
RAF1-212ENST00000494557 ANKARQ7Z5J8 1434 aa11.2□□□□□ -0.62
RAF1-212ENST00000494557 NCAPD2Q15021 1401 aa11.19□□□□□ -0.62
RAF1-212ENST00000494557 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
RAF1-212ENST00000494557 WDR43Q15061 677 aaKnown RBP eCLIP11.18□□□□□ -0.62
RAF1-212ENST00000494557 MYT1LQ9UL68 1186 aa11.18□□□□□ -0.62
RAF1-212ENST00000494557 METP08581 1390 aa11.17□□□□□ -0.62
RAF1-212ENST00000494557 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
RAF1-212ENST00000494557 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
RAF1-212ENST00000494557 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
RAF1-212ENST00000494557 KIF24Q5T7B8 1368 aa11.17□□□□□ -0.62
RAF1-212ENST00000494557 TNRQ92752 1358 aa11.17□□□□□ -0.62
RAF1-212ENST00000494557 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.16□□□□□ -0.62
RAF1-212ENST00000494557 KIF1AQ12756 1690 aa11.16□□□□□ -0.62
RAF1-212ENST00000494557 FYB1O15117 783 aa11.16□□□□□ -0.62
RAF1-212ENST00000494557 GGT6Q6P531 493 aa11.15□□□□□ -0.62
RAF1-212ENST00000494557 CRBNQ96SW2 442 aa11.15□□□□□ -0.62
RAF1-212ENST00000494557 ALS2Q96Q42 1657 aa11.15□□□□□ -0.62
RAF1-212ENST00000494557 NFAT5O94916 1531 aa11.15□□□□□ -0.62
RAF1-212ENST00000494557 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
RAF1-212ENST00000494557 C20orf194Q5TEA3 1177 aa11.14□□□□□ -0.63
RAF1-212ENST00000494557 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
RAF1-212ENST00000494557 TRAK1Q9UPV9 953 aa11.14□□□□□ -0.63
RAF1-212ENST00000494557 IPO9Q96P70 1041 aaKnown RBP11.13□□□□□ -0.63
RAF1-212ENST00000494557 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
RAF1-212ENST00000494557 SLIT3O75094 1523 aa11.13□□□□□ -0.63
RAF1-212ENST00000494557 PARP4Q9UKK3 1724 aaKnown RBP11.13□□□□□ -0.63
RAF1-212ENST00000494557 RARSP54136 660 aaKnown RBP11.13□□□□□ -0.63
RAF1-212ENST00000494557 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.13□□□□□ -0.63
RAF1-212ENST00000494557 USP6P35125 1406 aa11.13□□□□□ -0.63
RAF1-212ENST00000494557 C8orf34Q49A92 452 aa11.13□□□□□ -0.63
RAF1-212ENST00000494557 TMEM132EQ6IEE7 984 aa11.13□□□□□ -0.63
RAF1-212ENST00000494557 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
RAF1-212ENST00000494557 APAF1O14727 1248 aa11.12□□□□□ -0.63
RAF1-212ENST00000494557 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
RAF1-212ENST00000494557 KDRP35968 1356 aa11.12□□□□□ -0.63
RAF1-212ENST00000494557 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
RAF1-212ENST00000494557 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 FAM69CQ0P6D2 419 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 MORC1Q86VD1 984 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 PLEKHG3A1L390 1219 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 PDE4AP27815 886 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 MTHFSP49914 203 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 POLR3GLQ9BT43 218 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 RSPH6AQ9H0K4 717 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 RGS12O14924 1447 aa11.1□□□□□ -0.63
RAF1-212ENST00000494557 FBXO31Q5XUX0 539 aaPredicted RBP11.09□□□□□ -0.63
RAF1-212ENST00000494557 USP19O94966 1318 aa11.09□□□□□ -0.63
RAF1-212ENST00000494557 TCP11L2Q8N4U5 519 aa11.09□□□□□ -0.63
RAF1-212ENST00000494557 IBTKQ9P2D0 1353 aaPredicted RBP11.09□□□□□ -0.63
RAF1-212ENST00000494557 FCHSD2O94868 740 aa11.09□□□□□ -0.63
RAF1-212ENST00000494557 ALDH1L2Q3SY69 923 aa11.09□□□□□ -0.63
RAF1-212ENST00000494557 PRAM1Q96QH2 718 aa11.09□□□□□ -0.63
RAF1-212ENST00000494557 COL18A1P39060 1754 aa11.08□□□□□ -0.64
RAF1-212ENST00000494557 WASLO00401 505 aaPredicted RBP11.08□□□□□ -0.64
RAF1-212ENST00000494557 CFAP53Q96M91 514 aa11.07□□□□□ -0.64
RAF1-212ENST00000494557 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
RAF1-212ENST00000494557 PKD1L3Q7Z443 1732 aa11.07□□□□□ -0.64
RAF1-212ENST00000494557 RTL1A6NKG5 1358 aa11.07□□□□□ -0.64
RAF1-212ENST00000494557 ARHGEF10O15013 1369 aa11.07□□□□□ -0.64
RAF1-212ENST00000494557 CDK19Q9BWU1 502 aa11.07□□□□□ -0.64
RAF1-212ENST00000494557 IL13P35225 146 aa11.07□□□□□ -0.64
RAF1-212ENST00000494557 HDAC1Q13547 482 aaPredicted RBP11.07□□□□□ -0.64
RAF1-212ENST00000494557 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
RAF1-212ENST00000494557 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
RAF1-212ENST00000494557 OVOS2A0A0G2JMS6 1433 aa11.06□□□□□ -0.64
RAF1-212ENST00000494557 XIRP1Q702N8 1843 aaKnown RBP11.06□□□□□ -0.64
RAF1-212ENST00000494557 MAPK8IP3Q9UPT6 1336 aa11.06□□□□□ -0.64
RAF1-212ENST00000494557 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
RAF1-212ENST00000494557 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
RAF1-212ENST00000494557 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
RAF1-212ENST00000494557 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
RAF1-212ENST00000494557 MYH16Q9H6N6 1097 aa11.05□□□□□ -0.64
RAF1-212ENST00000494557 NOP58Q9Y2X3 529 aaKnown RBP11.05□□□□□ -0.64
RAF1-212ENST00000494557 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
RAF1-212ENST00000494557 PRR36Q9H6K5 1346 aa11.05□□□□□ -0.64
RAF1-212ENST00000494557 POLKQ9UBT6 870 aa11.05□□□□□ -0.64
RAF1-212ENST00000494557 KIAA0232Q92628 1395 aa11.05□□□□□ -0.64
RAF1-212ENST00000494557 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
RAF1-212ENST00000494557 CRB1P82279 1406 aa11.04□□□□□ -0.64
RAF1-212ENST00000494557 KIF16BQ96L93 1317 aa11.04□□□□□ -0.64
RAF1-212ENST00000494557 PAPPAQ13219 1627 aa11.04□□□□□ -0.64
RAF1-212ENST00000494557 GLI3P10071 1580 aa11.04□□□□□ -0.64
RAF1-212ENST00000494557 SCN11AQ9UI33 1791 aa11.04□□□□□ -0.64
RAF1-212ENST00000494557 PLIN1O60240 522 aa11.03□□□□□ -0.64
RAF1-212ENST00000494557 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms