RNA–Protein interactions for RNA: ENST00000494418.1

KLHDC9-208, Transcript of kelch domain containing 9, human

TSL 5

Gene KLHDC9, Length 581 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC9-208	ENST00000494418	SBNO2	Q9Y2G9	1366 aa		32.92	■■■□□ 2.86
KLHDC9-208	ENST00000494418	CCER1	Q8TC90	406 aa	Predicted RBP	32.89	■■■□□ 2.86
KLHDC9-208	ENST00000494418	CABP1	Q9NZU7	370 aa		32.89	■■■□□ 2.86
KLHDC9-208	ENST00000494418	TIMELESS	Q9UNS1	1208 aa		32.88	■■■□□ 2.85
KLHDC9-208	ENST00000494418	BCL9L	Q86UU0	1499 aa		32.86	■■■□□ 2.85
KLHDC9-208	ENST00000494418	CRYBG1	Q9Y4K1	1723 aa		32.85	■■■□□ 2.85
KLHDC9-208	ENST00000494418	RBM6	P78332	1123 aa	Known RBP	32.85	■■■□□ 2.85
KLHDC9-208	ENST00000494418	TRPC5	Q9UL62	973 aa	Predicted RBP	32.85	■■■□□ 2.85
KLHDC9-208	ENST00000494418	SLIT2	O94813	1529 aa		32.83	■■■□□ 2.85
KLHDC9-208	ENST00000494418	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.83	■■■□□ 2.85
KLHDC9-208	ENST00000494418	ATRN	O75882	1429 aa		32.83	■■■□□ 2.85
KLHDC9-208	ENST00000494418	ATAD2	Q6PL18	1390 aa		32.82	■■■□□ 2.84
KLHDC9-208	ENST00000494418	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.81	■■■□□ 2.84
KLHDC9-208	ENST00000494418	PLCH1	Q4KWH8	1693 aa		32.81	■■■□□ 2.84
KLHDC9-208	ENST00000494418	NUTM2G	Q5VZR2	741 aa		32.8	■■■□□ 2.84
KLHDC9-208	ENST00000494418	USP6	P35125	1406 aa		32.79	■■■□□ 2.84
KLHDC9-208	ENST00000494418	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.77	■■■□□ 2.84
KLHDC9-208	ENST00000494418	ST20-MTHFS	A0A0A6YYL1	179 aa		32.77	■■■□□ 2.84
KLHDC9-208	ENST00000494418	UNC5CL	Q8IV45	518 aa		32.77	■■■□□ 2.84
KLHDC9-208	ENST00000494418	ABTB2	Q8N961	1025 aa		32.77	■■■□□ 2.84
KLHDC9-208	ENST00000494418	BRD4	O60885	1362 aa	Predicted RBP	32.77	■■■□□ 2.84
KLHDC9-208	ENST00000494418	NWD2	Q9ULI1	1742 aa		32.77	■■■□□ 2.84
KLHDC9-208	ENST00000494418	RGS12	O14924	1447 aa		32.77	■■■□□ 2.84
KLHDC9-208	ENST00000494418	FAM83G	A6ND36	823 aa		32.76	■■■□□ 2.83
KLHDC9-208	ENST00000494418	USP47	Q96K76	1375 aa		32.74	■■■□□ 2.83
KLHDC9-208	ENST00000494418	AKAP12	Q02952	1782 aa		32.74	■■■□□ 2.83
KLHDC9-208	ENST00000494418	TESK2	Q96S53	571 aa		32.74	■■■□□ 2.83
KLHDC9-208	ENST00000494418	COL14A1	Q05707	1796 aa	Known RBP	32.73	■■■□□ 2.83
KLHDC9-208	ENST00000494418	SSH2	Q76I76	1423 aa		32.71	■■■□□ 2.83
KLHDC9-208	ENST00000494418	ZNF692	Q9BU19	519 aa	Predicted RBP	32.7	■■■□□ 2.83
KLHDC9-208	ENST00000494418	CPSF1	Q10570	1443 aa	Known RBP	32.69	■■■□□ 2.82
KLHDC9-208	ENST00000494418	GJD4	Q96KN9	370 aa	Predicted RBP	32.69	■■■□□ 2.82
KLHDC9-208	ENST00000494418	NRK	Q7Z2Y5	1582 aa		32.68	■■■□□ 2.82
KLHDC9-208	ENST00000494418	PRDM11	Q9NQV5	511 aa		32.68	■■■□□ 2.82
KLHDC9-208	ENST00000494418	USP19	O94966	1318 aa		32.68	■■■□□ 2.82
KLHDC9-208	ENST00000494418	KIAA0232	Q92628	1395 aa		32.68	■■■□□ 2.82
KLHDC9-208	ENST00000494418	NLRP13	Q86W25	1043 aa		32.67	■■■□□ 2.82
KLHDC9-208	ENST00000494418	NRAP	Q86VF7	1730 aa		32.67	■■■□□ 2.82
KLHDC9-208	ENST00000494418	PIK3C2A	O00443	1686 aa		32.66	■■■□□ 2.82
KLHDC9-208	ENST00000494418	TMC1	Q8TDI8	760 aa		32.66	■■■□□ 2.82
KLHDC9-208	ENST00000494418	BTG4	Q9NY30	223 aa		32.66	■■■□□ 2.82
KLHDC9-208	ENST00000494418	KTN1	Q86UP2	1357 aa	Known RBP	32.66	■■■□□ 2.82
KLHDC9-208	ENST00000494418	GLI3	P10071	1580 aa		32.66	■■■□□ 2.82
KLHDC9-208	ENST00000494418	ZC3H6	P61129	1189 aa	Known RBP	32.65	■■■□□ 2.82
KLHDC9-208	ENST00000494418	PUS7	Q96PZ0	661 aa	Known RBP	32.65	■■■□□ 2.82
KLHDC9-208	ENST00000494418	MON2	Q7Z3U7	1717 aa		32.65	■■■□□ 2.82
KLHDC9-208	ENST00000494418	SLC24A1	O60721	1099 aa		32.64	■■■□□ 2.82
KLHDC9-208	ENST00000494418	VPS72	Q15906	364 aa		32.64	■■■□□ 2.82
KLHDC9-208	ENST00000494418	TTC21B	Q7Z4L5	1316 aa		32.63	■■■□□ 2.81
KLHDC9-208	ENST00000494418	NLRP6	P59044	892 aa		32.63	■■■□□ 2.81
KLHDC9-208	ENST00000494418	CD163L1	Q9NR16	1453 aa		32.62	■■■□□ 2.81
KLHDC9-208	ENST00000494418	CHRNA2	Q15822	529 aa		32.61	■■■□□ 2.81
KLHDC9-208	ENST00000494418	SLC12A5	Q9H2X9	1139 aa		32.61	■■■□□ 2.81
KLHDC9-208	ENST00000494418	CCDC9	Q9Y3X0	531 aa	Known RBP	32.61	■■■□□ 2.81
KLHDC9-208	ENST00000494418	TTC21A	Q8NDW8	1320 aa		32.59	■■■□□ 2.81
KLHDC9-208	ENST00000494418	GC	P02774	474 aa		32.59	■■■□□ 2.81
KLHDC9-208	ENST00000494418	SLIT3	O75094	1523 aa		32.58	■■■□□ 2.81
KLHDC9-208	ENST00000494418	CPD	O75976	1380 aa		32.58	■■■□□ 2.81
KLHDC9-208	ENST00000494418	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.57	■■■□□ 2.8
KLHDC9-208	ENST00000494418	TMF1	P82094	1093 aa		32.56	■■■□□ 2.8
KLHDC9-208	ENST00000494418	TERF2IP	Q9NYB0	399 aa		32.55	■■■□□ 2.8
KLHDC9-208	ENST00000494418	NINL	Q9Y2I6	1382 aa		32.54	■■■□□ 2.8
KLHDC9-208	ENST00000494418	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
KLHDC9-208	ENST00000494418		A0A1W2PP64	1363 aa		32.53	■■■□□ 2.8
KLHDC9-208	ENST00000494418	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.52	■■■□□ 2.8
KLHDC9-208	ENST00000494418	LMO7	Q8WWI1	1683 aa		32.51	■■■□□ 2.79
KLHDC9-208	ENST00000494418	EDC4	Q6P2E9	1401 aa	Known RBP	32.5	■■■□□ 2.79
KLHDC9-208	ENST00000494418	CAMTA1	Q9Y6Y1	1673 aa		32.49	■■■□□ 2.79
KLHDC9-208	ENST00000494418	STRN4	Q9NRL3	753 aa		32.48	■■■□□ 2.79
KLHDC9-208	ENST00000494418	SPATA31A5	Q5VU36	1347 aa		32.48	■■■□□ 2.79
KLHDC9-208	ENST00000494418	SPATA31A7	Q8IWB4	1347 aa		32.48	■■■□□ 2.79
KLHDC9-208	ENST00000494418	ZBTB7C	A1YPR0	619 aa		32.47	■■■□□ 2.79
KLHDC9-208	ENST00000494418	ONECUT3	O60422	494 aa	Predicted RBP	32.46	■■■□□ 2.79
KLHDC9-208	ENST00000494418	NME9	Q86XW9	330 aa		32.46	■■■□□ 2.79
KLHDC9-208	ENST00000494418	SEPT12	Q8IYM1	358 aa		32.46	■■■□□ 2.79
KLHDC9-208	ENST00000494418	ZRANB1	Q9UGI0	708 aa		32.46	■■■□□ 2.79
KLHDC9-208	ENST00000494418	BRWD3	Q6RI45	1802 aa		32.45	■■■□□ 2.79
KLHDC9-208	ENST00000494418	CDCA8	Q53HL2	280 aa		32.45	■■■□□ 2.79
KLHDC9-208	ENST00000494418	USP54	Q70EL1	1684 aa		32.44	■■■□□ 2.78
KLHDC9-208	ENST00000494418	SOX12	O15370	315 aa		32.44	■■■□□ 2.78
KLHDC9-208	ENST00000494418	EVA1C	P58658	441 aa		32.44	■■■□□ 2.78
KLHDC9-208	ENST00000494418	FAM98C	Q17RN3	349 aa	Known RBP	32.44	■■■□□ 2.78
KLHDC9-208	ENST00000494418	KCNH5	Q8NCM2	988 aa		32.44	■■■□□ 2.78
KLHDC9-208	ENST00000494418	USP31	Q70CQ4	1352 aa		32.44	■■■□□ 2.78
KLHDC9-208	ENST00000494418	AATK	Q6ZMQ8	1374 aa		32.42	■■■□□ 2.78
KLHDC9-208	ENST00000494418	NFAT5	O94916	1531 aa		32.41	■■■□□ 2.78
KLHDC9-208	ENST00000494418		A0A0G2JS52	829 aa		32.41	■■■□□ 2.78
KLHDC9-208	ENST00000494418	MYT1	Q01538	1121 aa		32.41	■■■□□ 2.78
KLHDC9-208	ENST00000494418	SPATA31A1	Q5TZJ5	1347 aa		32.41	■■■□□ 2.78
KLHDC9-208	ENST00000494418	ANKRD36B	Q8N2N9	1353 aa		32.41	■■■□□ 2.78
KLHDC9-208	ENST00000494418	EP400	Q96L91	3159 aa		32.4	■■■□□ 2.78
KLHDC9-208	ENST00000494418	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
KLHDC9-208	ENST00000494418	COL5A2	P05997	1499 aa	Predicted RBP	32.39	■■■□□ 2.78
KLHDC9-208	ENST00000494418	COL18A1	P39060	1754 aa		32.39	■■■□□ 2.78
KLHDC9-208	ENST00000494418	LARP1	Q6PKG0	1096 aa	Known RBP	32.38	■■■□□ 2.77
KLHDC9-208	ENST00000494418	ARHGEF25	Q86VW2	580 aa		32.38	■■■□□ 2.77
KLHDC9-208	ENST00000494418	HSPA5	P11021	654 aa	Known RBP	32.36	■■■□□ 2.77
KLHDC9-208	ENST00000494418	MYOM1	P52179	1685 aa		32.36	■■■□□ 2.77
KLHDC9-208	ENST00000494418	THSD7A	Q9UPZ6	1657 aa		32.35	■■■□□ 2.77
KLHDC9-208	ENST00000494418	USP35	Q9P2H5	1018 aa		32.34	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms