RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 RALGAPBQ86X10 1494 aa31.97■■■□□ 2.71
CDKN2A-206ENST00000494262 ROCK2O75116 1388 aaKnown RBP31.97■■■□□ 2.71
CDKN2A-206ENST00000494262 FAM83GA6ND36 823 aa31.97■■■□□ 2.71
CDKN2A-206ENST00000494262 POLR3AO14802 1390 aaPredicted RBP31.96■■■□□ 2.71
CDKN2A-206ENST00000494262 PLEKHG3A1L390 1219 aa31.96■■■□□ 2.71
CDKN2A-206ENST00000494262 ATAD2Q6PL18 1390 aa31.95■■■□□ 2.71
CDKN2A-206ENST00000494262 NWD2Q9ULI1 1742 aa31.95■■■□□ 2.71
CDKN2A-206ENST00000494262 NBPF8Q3BBV2 869 aa31.95■■■□□ 2.71
CDKN2A-206ENST00000494262 CABP2Q9NPB3 220 aa31.95■■■□□ 2.71
CDKN2A-206ENST00000494262 GLI3P10071 1580 aa31.94■■■□□ 2.7
CDKN2A-206ENST00000494262 VPS72Q15906 364 aa31.92■■■□□ 2.7
CDKN2A-206ENST00000494262 PPIP5K1Q6PFW1 1433 aa31.92■■■□□ 2.7
CDKN2A-206ENST00000494262 CCDC9Q9Y3X0 531 aaKnown RBP31.91■■■□□ 2.7
CDKN2A-206ENST00000494262 EP400Q96L91 3159 aa31.91■■■□□ 2.7
CDKN2A-206ENST00000494262 CRYBG1Q9Y4K1 1723 aa31.9■■■□□ 2.7
CDKN2A-206ENST00000494262 NUTM2GQ5VZR2 741 aa31.88■■■□□ 2.69
CDKN2A-206ENST00000494262 BTG4Q9NY30 223 aa31.88■■■□□ 2.69
CDKN2A-206ENST00000494262 COL14A1Q05707 1796 aaKnown RBP31.87■■■□□ 2.69
CDKN2A-206ENST00000494262 TONSLQ96HA7 1378 aa31.85■■■□□ 2.69
CDKN2A-206ENST00000494262 EVC2Q86UK5 1308 aa31.85■■■□□ 2.69
CDKN2A-206ENST00000494262 NRAPQ86VF7 1730 aa31.84■■■□□ 2.69
CDKN2A-206ENST00000494262 PRDM11Q9NQV5 511 aa31.84■■■□□ 2.69
CDKN2A-206ENST00000494262 PHRF1Q9P1Y6 1649 aaKnown RBP31.82■■■□□ 2.69
CDKN2A-206ENST00000494262 ABTB2Q8N961 1025 aa31.82■■■□□ 2.68
CDKN2A-206ENST00000494262 CABP1Q9NZU7 370 aa31.82■■■□□ 2.68
CDKN2A-206ENST00000494262 SEPT12Q8IYM1 358 aa31.81■■■□□ 2.68
CDKN2A-206ENST00000494262 KIAA0232Q92628 1395 aa31.81■■■□□ 2.68
CDKN2A-206ENST00000494262 ZC3H6P61129 1189 aaKnown RBP31.77■■■□□ 2.68
CDKN2A-206ENST00000494262 CARD11Q9BXL7 1154 aa31.77■■■□□ 2.68
CDKN2A-206ENST00000494262 ONECUT3O60422 494 aaPredicted RBP31.76■■■□□ 2.67
CDKN2A-206ENST00000494262 CHRNA2Q15822 529 aa31.76■■■□□ 2.67
CDKN2A-206ENST00000494262 BRWD3Q6RI45 1802 aa31.76■■■□□ 2.67
CDKN2A-206ENST00000494262 BRD4O60885 1362 aaPredicted RBP31.74■■■□□ 2.67
CDKN2A-206ENST00000494262 USP6P35125 1406 aa31.74■■■□□ 2.67
CDKN2A-206ENST00000494262 A0A0G2JS52 829 aa31.73■■■□□ 2.67
CDKN2A-206ENST00000494262 MYT1Q01538 1121 aa31.73■■■□□ 2.67
CDKN2A-206ENST00000494262 FAM98CQ17RN3 349 aaKnown RBP31.73■■■□□ 2.67
CDKN2A-206ENST00000494262 USP19O94966 1318 aa31.73■■■□□ 2.67
CDKN2A-206ENST00000494262 NLRP13Q86W25 1043 aa31.72■■■□□ 2.67
CDKN2A-206ENST00000494262 NRKQ7Z2Y5 1582 aa31.72■■■□□ 2.67
CDKN2A-206ENST00000494262 SPATA31A5Q5VU36 1347 aa31.71■■■□□ 2.67
CDKN2A-206ENST00000494262 SPATA31A7Q8IWB4 1347 aa31.71■■■□□ 2.67
CDKN2A-206ENST00000494262 CCDC125Q86Z20 511 aa31.69■■■□□ 2.66
CDKN2A-206ENST00000494262 KRT27Q7Z3Y8 459 aa31.68■■■□□ 2.66
CDKN2A-206ENST00000494262 STRN4Q9NRL3 753 aa31.68■■■□□ 2.66
CDKN2A-206ENST00000494262 SBNO2Q9Y2G9 1366 aa31.67■■■□□ 2.66
CDKN2A-206ENST00000494262 GCP02774 474 aa31.66■■■□□ 2.66
CDKN2A-206ENST00000494262 CPDO75976 1380 aa31.66■■■□□ 2.66
CDKN2A-206ENST00000494262 NLRP6P59044 892 aa31.65■■■□□ 2.66
CDKN2A-206ENST00000494262 SSH2Q76I76 1423 aa31.65■■■□□ 2.66
CDKN2A-206ENST00000494262 ZNF692Q9BU19 519 aaPredicted RBP31.63■■■□□ 2.65
CDKN2A-206ENST00000494262 BLMP54132 1417 aaPredicted RBP31.62■■■□□ 2.65
CDKN2A-206ENST00000494262 EVA1CP58658 441 aa31.62■■■□□ 2.65
CDKN2A-206ENST00000494262 SPATA31A1Q5TZJ5 1347 aa31.62■■■□□ 2.65
CDKN2A-206ENST00000494262 AKAP12Q02952 1782 aa31.61■■■□□ 2.65
CDKN2A-206ENST00000494262 PIK3C2AO00443 1686 aa31.6■■■□□ 2.65
CDKN2A-206ENST00000494262 CAMTA1Q9Y6Y1 1673 aa31.6■■■□□ 2.65
CDKN2A-206ENST00000494262 TTC21BQ7Z4L5 1316 aa31.59■■■□□ 2.65
CDKN2A-206ENST00000494262 LMO7Q8WWI1 1683 aa31.58■■■□□ 2.65
CDKN2A-206ENST00000494262 ZBTB7CA1YPR0 619 aa31.58■■■□□ 2.65
CDKN2A-206ENST00000494262 SLIT3O75094 1523 aa31.57■■■□□ 2.64
CDKN2A-206ENST00000494262 THSD7AQ9UPZ6 1657 aa31.57■■■□□ 2.64
CDKN2A-206ENST00000494262 CPSF1Q10570 1443 aaKnown RBP31.57■■■□□ 2.64
CDKN2A-206ENST00000494262 KTN1Q86UP2 1357 aaKnown RBP31.56■■■□□ 2.64
CDKN2A-206ENST00000494262 USP35Q9P2H5 1018 aa31.56■■■□□ 2.64
CDKN2A-206ENST00000494262 SF3B2Q13435 895 aaKnown RBP31.55■■■□□ 2.64
CDKN2A-206ENST00000494262 LARP1Q6PKG0 1096 aaKnown RBP31.55■■■□□ 2.64
CDKN2A-206ENST00000494262 TTC21AQ8NDW8 1320 aa31.53■■■□□ 2.64
CDKN2A-206ENST00000494262 TMC1Q8TDI8 760 aa31.53■■■□□ 2.64
CDKN2A-206ENST00000494262 FAM182BQ5T319 152 aa31.5■■■□□ 2.63
CDKN2A-206ENST00000494262 DEFB132Q7Z7B7 95 aa31.5■■■□□ 2.63
CDKN2A-206ENST00000494262 MON2Q7Z3U7 1717 aa31.49■■■□□ 2.63
CDKN2A-206ENST00000494262 COL5A2P05997 1499 aaPredicted RBP31.49■■■□□ 2.63
CDKN2A-206ENST00000494262 AATKQ6ZMQ8 1374 aa31.49■■■□□ 2.63
CDKN2A-206ENST00000494262 ST20-MTHFSA0A0A6YYL1 179 aa31.48■■■□□ 2.63
CDKN2A-206ENST00000494262 SOX12O15370 315 aa31.47■■■□□ 2.63
CDKN2A-206ENST00000494262 BARGINQ6ZT62 677 aa31.47■■■□□ 2.63
CDKN2A-206ENST00000494262 TCP11L2Q8N4U5 519 aa31.47■■■□□ 2.63
CDKN2A-206ENST00000494262 SLC12A5Q9H2X9 1139 aa31.47■■■□□ 2.63
CDKN2A-206ENST00000494262 ZRANB1Q9UGI0 708 aa31.47■■■□□ 2.63
CDKN2A-206ENST00000494262 CD163L1Q9NR16 1453 aa31.46■■■□□ 2.63
CDKN2A-206ENST00000494262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.46■■■□□ 2.63
CDKN2A-206ENST00000494262 KCNH5Q8NCM2 988 aa31.46■■■□□ 2.63
CDKN2A-206ENST00000494262 PCGF6Q9BYE7 350 aa31.46■■■□□ 2.63
CDKN2A-206ENST00000494262 HDGFL2Q7Z4V5 671 aaPredicted RBP31.45■■■□□ 2.63
CDKN2A-206ENST00000494262 TESK2Q96S53 571 aa31.45■■■□□ 2.63
CDKN2A-206ENST00000494262 SRCAPQ6ZRS2 3230 aa31.44■■■□□ 2.62
CDKN2A-206ENST00000494262 PUS7Q96PZ0 661 aaKnown RBP31.44■■■□□ 2.62
CDKN2A-206ENST00000494262 ARHGEF25Q86VW2 580 aa31.42■■■□□ 2.62
CDKN2A-206ENST00000494262 THRAP3Q9Y2W1 955 aaKnown RBP31.42■■■□□ 2.62
CDKN2A-206ENST00000494262 CRB1P82279 1406 aa31.41■■■□□ 2.62
CDKN2A-206ENST00000494262 COL18A1P39060 1754 aa31.41■■■□□ 2.62
CDKN2A-206ENST00000494262 TERF2IPQ9NYB0 399 aa31.41■■■□□ 2.62
CDKN2A-206ENST00000494262 AXIN2Q9Y2T1 843 aa31.4■■■□□ 2.62
CDKN2A-206ENST00000494262 NFAT5O94916 1531 aa31.39■■■□□ 2.62
CDKN2A-206ENST00000494262 BAG6P46379 1132 aa31.39■■■□□ 2.62
CDKN2A-206ENST00000494262 PDE3BQ13370 1112 aa31.39■■■□□ 2.62
CDKN2A-206ENST00000494262 NME9Q86XW9 330 aa31.39■■■□□ 2.62
CDKN2A-206ENST00000494262 SLC24A1O60721 1099 aa31.38■■■□□ 2.61
CDKN2A-206ENST00000494262 A0A1W2PP64 1363 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms