RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CTDSPL2Q05D32 466 aa4.81□□□□□ -1.64
LMNB1-207ENST00000494185 MCM6Q14566 821 aa4.81□□□□□ -1.64
LMNB1-207ENST00000494185 ZNF598Q86UK7 904 aaKnown RBP4.81□□□□□ -1.64
LMNB1-207ENST00000494185 UBTFP17480 764 aaKnown RBP4.8□□□□□ -1.64
LMNB1-207ENST00000494185 ZNF697Q5TEC3 545 aa4.8□□□□□ -1.64
LMNB1-207ENST00000494185 C14orf37Q86TY3 774 aa4.8□□□□□ -1.64
LMNB1-207ENST00000494185 CCDC125Q86Z20 511 aa4.8□□□□□ -1.64
LMNB1-207ENST00000494185 EHBP1Q8NDI1 1231 aa4.8□□□□□ -1.64
LMNB1-207ENST00000494185 FAM174AQ8TBP5 190 aa4.8□□□□□ -1.64
LMNB1-207ENST00000494185 FKBPLQ9UIM3 349 aa4.8□□□□□ -1.64
LMNB1-207ENST00000494185 F12P00748 615 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-207ENST00000494185 VARSP26640 1264 aaKnown RBP4.79□□□□□ -1.64
LMNB1-207ENST00000494185 WASHC4Q2M389 1173 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 NBPF20Q3BBV1 942 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 SPRYD7Q5W111 196 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 PDXDC2PQ6P474 469 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 ZBTB33Q86T24 672 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 ZNF511Q8NB15 262 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 SLC10A4Q96EP9 437 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 SNRKQ9NRH2 765 aa4.79□□□□□ -1.64
LMNB1-207ENST00000494185 WNT7AO00755 349 aa4.78□□□□□ -1.64
LMNB1-207ENST00000494185 PPEF1O14829 653 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-207ENST00000494185 PER1O15534 1290 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-207ENST00000494185 CYP4X1Q8N118 509 aa4.78□□□□□ -1.64
LMNB1-207ENST00000494185 MTMR14Q8NCE2 650 aa4.78□□□□□ -1.64
LMNB1-207ENST00000494185 LRRN4Q8WUT4 740 aa4.78□□□□□ -1.64
LMNB1-207ENST00000494185 ARHGAP9Q9BRR9 750 aa4.78□□□□□ -1.64
LMNB1-207ENST00000494185 MAP10Q9P2G4 905 aa4.78□□□□□ -1.64
LMNB1-207ENST00000494185 TTC24A2A3L6 582 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-207ENST00000494185 SOX11P35716 441 aa4.77□□□□□ -1.65
LMNB1-207ENST00000494185 EIF4G2P78344 907 aaKnown RBP eCLIP4.77□□□□□ -1.65
LMNB1-207ENST00000494185 PRR20EP86478 221 aa4.77□□□□□ -1.65
LMNB1-207ENST00000494185 PRR20CP86479 221 aa4.77□□□□□ -1.65
LMNB1-207ENST00000494185 PRR20DP86480 221 aa4.77□□□□□ -1.65
LMNB1-207ENST00000494185 PRR20BP86481 221 aa4.77□□□□□ -1.65
LMNB1-207ENST00000494185 PRR20AP86496 221 aa4.77□□□□□ -1.65
LMNB1-207ENST00000494185 IRX2Q9BZI1 471 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-207ENST00000494185 HMX1Q9NP08 348 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-207ENST00000494185 WASF2Q9Y6W5 498 aa4.77□□□□□ -1.65
LMNB1-207ENST00000494185 MAGEB6P1A0A0J9YX57 407 aa4.76□□□□□ -1.65
LMNB1-207ENST00000494185 ZBBXA8MT70 800 aa4.76□□□□□ -1.65
LMNB1-207ENST00000494185 NR6A1Q15406 480 aa4.76□□□□□ -1.65
LMNB1-207ENST00000494185 NRG2O14511 850 aaPredicted RBP4.75□□□□□ -1.65
LMNB1-207ENST00000494185 FOXC1Q12948 553 aa4.75□□□□□ -1.65
LMNB1-207ENST00000494185 LINC01559Q495D7 138 aa4.75□□□□□ -1.65
LMNB1-207ENST00000494185 RC3H1Q5TC82 1133 aaKnown RBP4.75□□□□□ -1.65
LMNB1-207ENST00000494185 RNF20Q5VTR2 975 aa4.75□□□□□ -1.65
LMNB1-207ENST00000494185 SNIP1Q8TAD8 396 aaKnown RBP4.75□□□□□ -1.65
LMNB1-207ENST00000494185 BAP1Q92560 729 aa4.75□□□□□ -1.65
LMNB1-207ENST00000494185 GJD4Q96KN9 370 aaPredicted RBP4.75□□□□□ -1.65
LMNB1-207ENST00000494185 ESF1Q9H501 851 aaKnown RBP4.75□□□□□ -1.65
LMNB1-207ENST00000494185 TIMELESSQ9UNS1 1208 aa4.75□□□□□ -1.65
LMNB1-207ENST00000494185 PDZRN3Q9UPQ7 1066 aa4.75□□□□□ -1.65
LMNB1-207ENST00000494185 DHX9Q08211 1270 aaKnown RBP4.74□□□□□ -1.65
LMNB1-207ENST00000494185 PKDCCQ504Y2 493 aa4.74□□□□□ -1.65
LMNB1-207ENST00000494185 LIAT1Q6ZQX7 453 aa4.74□□□□□ -1.65
LMNB1-207ENST00000494185 DZIP3Q86Y13 1208 aaKnown RBP4.74□□□□□ -1.65
LMNB1-207ENST00000494185 MPNDQ8N594 471 aa4.74□□□□□ -1.65
LMNB1-207ENST00000494185 CARD14Q9BXL6 1004 aa4.74□□□□□ -1.65
LMNB1-207ENST00000494185 TRIM34Q9BYJ4 488 aa4.74□□□□□ -1.65
LMNB1-207ENST00000494185 GDPD2Q9HCC8 539 aa4.74□□□□□ -1.65
LMNB1-207ENST00000494185 COG6Q9Y2V7 657 aa4.74□□□□□ -1.65
LMNB1-207ENST00000494185 A6NJR5 290 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 ABL2P42684 1182 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 SH3BP2P78314 561 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 NR1H3Q13133 447 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 NR5A1Q13285 461 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 TRMT44Q8IYL2 757 aaKnown RBP4.73□□□□□ -1.65
LMNB1-207ENST00000494185 SEPT12Q8IYM1 358 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 EPS8L1Q8TE68 723 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 CLUAP1Q96AJ1 413 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 POM121Q96HA1 1249 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 ZMYND15Q9H091 742 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 TBC1D2BQ9UPU7 963 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 MAP4K5Q9Y4K4 846 aa4.73□□□□□ -1.65
LMNB1-207ENST00000494185 ARID5BQ14865 1188 aa4.72□□□□□ -1.65
LMNB1-207ENST00000494185 CTC1Q2NKJ3 1217 aa4.72□□□□□ -1.65
LMNB1-207ENST00000494185 PLA2G2CQ5R387 149 aa4.72□□□□□ -1.65
LMNB1-207ENST00000494185 VASH1Q7L8A9 365 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-207ENST00000494185 SH3BP5LQ7L8J4 393 aa4.72□□□□□ -1.65
LMNB1-207ENST00000494185 PGPEP1Q9NXJ5 209 aa4.72□□□□□ -1.65
LMNB1-207ENST00000494185 FAM187AA6NFU0 413 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 GFRA3O60609 400 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 DGAT1O75907 488 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 UPP2O95045 317 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 ADH1CP00326 375 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 ALDH1A1P00352 501 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 SEMA3FQ13275 785 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 PTCRAQ6ISU1 281 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-207ENST00000494185 PROSER2Q86WR7 435 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-207ENST00000494185 MRGPRX2Q96LB1 330 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 PCDHB9Q9Y5E1 797 aa4.71□□□□□ -1.66
LMNB1-207ENST00000494185 TNFRSF10AO00220 468 aa4.7□□□□□ -1.66
LMNB1-207ENST00000494185 ERFEQ4G0M1 354 aa4.7□□□□□ -1.66
LMNB1-207ENST00000494185 SH3RF1Q7Z6J0 888 aa4.7□□□□□ -1.66
LMNB1-207ENST00000494185 ADAM32Q8TC27 787 aa4.7□□□□□ -1.66
LMNB1-207ENST00000494185 SIRT1Q96EB6 747 aa4.7□□□□□ -1.66
LMNB1-207ENST00000494185 C1QTNF2Q9BXJ5 285 aa4.7□□□□□ -1.66
LMNB1-207ENST00000494185 EMILIN1Q9Y6C2 1016 aa4.7□□□□□ -1.66
LMNB1-207ENST00000494185 GDF9O60383 454 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms