RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 CABP2Q9NPB3 220 aa14.03□□□□□ -0.16
UFD1-210ENST00000494054 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
UFD1-210ENST00000494054 TOPAZ1Q8N9V7 1692 aa14.03□□□□□ -0.16
UFD1-210ENST00000494054 PLCH1Q4KWH8 1693 aa14.02□□□□□ -0.16
UFD1-210ENST00000494054 TRPM1Q7Z4N2 1603 aa14.02□□□□□ -0.16
UFD1-210ENST00000494054 ATAD2Q6PL18 1390 aa14.02□□□□□ -0.17
UFD1-210ENST00000494054 SRPK2P78362 688 aaKnown RBP14.02□□□□□ -0.17
UFD1-210ENST00000494054 NUTM2GQ5VZR2 741 aa14.01□□□□□ -0.17
UFD1-210ENST00000494054 BTG4Q9NY30 223 aa14□□□□□ -0.17
UFD1-210ENST00000494054 NWD2Q9ULI1 1742 aa14□□□□□ -0.17
UFD1-210ENST00000494054 CRYBG1Q9Y4K1 1723 aa14□□□□□ -0.17
UFD1-210ENST00000494054 PPIP5K1Q6PFW1 1433 aa13.99□□□□□ -0.17
UFD1-210ENST00000494054 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
UFD1-210ENST00000494054 QRICH2Q9H0J4 1663 aa13.99□□□□□ -0.17
UFD1-210ENST00000494054 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
UFD1-210ENST00000494054 SEPT12Q8IYM1 358 aa13.99□□□□□ -0.17
UFD1-210ENST00000494054 CCDC9Q9Y3X0 531 aaKnown RBP13.99□□□□□ -0.17
UFD1-210ENST00000494054 ONECUT3O60422 494 aaPredicted RBP13.98□□□□□ -0.17
UFD1-210ENST00000494054 CABP1Q9NZU7 370 aa13.98□□□□□ -0.17
UFD1-210ENST00000494054 COL14A1Q05707 1796 aaKnown RBP13.97□□□□□ -0.17
UFD1-210ENST00000494054 PRDM11Q9NQV5 511 aa13.97□□□□□ -0.17
UFD1-210ENST00000494054 NRAPQ86VF7 1730 aa13.97□□□□□ -0.17
UFD1-210ENST00000494054 KIAA0232Q92628 1395 aa13.96□□□□□ -0.17
UFD1-210ENST00000494054 ZC3H6P61129 1189 aaKnown RBP13.96□□□□□ -0.17
UFD1-210ENST00000494054 CHRNA2Q15822 529 aa13.96□□□□□ -0.17
UFD1-210ENST00000494054 ABTB2Q8N961 1025 aa13.96□□□□□ -0.17
UFD1-210ENST00000494054 EVC2Q86UK5 1308 aa13.95□□□□□ -0.18
UFD1-210ENST00000494054 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
UFD1-210ENST00000494054 PHRF1Q9P1Y6 1649 aaKnown RBP13.94□□□□□ -0.18
UFD1-210ENST00000494054 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
UFD1-210ENST00000494054 SPATA31A5Q5VU36 1347 aa13.93□□□□□ -0.18
UFD1-210ENST00000494054 SPATA31A7Q8IWB4 1347 aa13.93□□□□□ -0.18
UFD1-210ENST00000494054 TONSLQ96HA7 1378 aa13.93□□□□□ -0.18
UFD1-210ENST00000494054 USP19O94966 1318 aa13.92□□□□□ -0.18
UFD1-210ENST00000494054 USP6P35125 1406 aa13.92□□□□□ -0.18
UFD1-210ENST00000494054 CCDC125Q86Z20 511 aa13.92□□□□□ -0.18
UFD1-210ENST00000494054 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
UFD1-210ENST00000494054 SSH2Q76I76 1423 aa13.91□□□□□ -0.18
UFD1-210ENST00000494054 GCP02774 474 aa13.91□□□□□ -0.18
UFD1-210ENST00000494054 KRT27Q7Z3Y8 459 aa13.91□□□□□ -0.18
UFD1-210ENST00000494054 NLRP13Q86W25 1043 aa13.91□□□□□ -0.18
UFD1-210ENST00000494054 STRN4Q9NRL3 753 aa13.91□□□□□ -0.18
UFD1-210ENST00000494054 BRD4O60885 1362 aaPredicted RBP13.91□□□□□ -0.18
UFD1-210ENST00000494054 NRKQ7Z2Y5 1582 aa13.91□□□□□ -0.18
UFD1-210ENST00000494054 A0A0G2JS52 829 aa13.9□□□□□ -0.18
UFD1-210ENST00000494054 MYT1Q01538 1121 aa13.9□□□□□ -0.18
UFD1-210ENST00000494054 CPDO75976 1380 aa13.89□□□□□ -0.19
UFD1-210ENST00000494054 NLRP6P59044 892 aa13.89□□□□□ -0.19
UFD1-210ENST00000494054 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
UFD1-210ENST00000494054 SPATA31A1Q5TZJ5 1347 aa13.89□□□□□ -0.19
UFD1-210ENST00000494054 CAMTA1Q9Y6Y1 1673 aa13.88□□□□□ -0.19
UFD1-210ENST00000494054 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
UFD1-210ENST00000494054 SBNO2Q9Y2G9 1366 aa13.87□□□□□ -0.19
UFD1-210ENST00000494054 EVA1CP58658 441 aa13.87□□□□□ -0.19
UFD1-210ENST00000494054 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
UFD1-210ENST00000494054 DEFB132Q7Z7B7 95 aa13.87□□□□□ -0.19
UFD1-210ENST00000494054 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
UFD1-210ENST00000494054 LMO7Q8WWI1 1683 aa13.86□□□□□ -0.19
UFD1-210ENST00000494054 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
UFD1-210ENST00000494054 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
UFD1-210ENST00000494054 CPSF1Q10570 1443 aaKnown RBP13.86□□□□□ -0.19
UFD1-210ENST00000494054 EP400Q96L91 3159 aa13.85□□□□□ -0.19
UFD1-210ENST00000494054 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
UFD1-210ENST00000494054 THSD7AQ9UPZ6 1657 aa13.85□□□□□ -0.19
UFD1-210ENST00000494054 SLIT3O75094 1523 aa13.85□□□□□ -0.19
UFD1-210ENST00000494054 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
UFD1-210ENST00000494054 AKAP12Q02952 1782 aa13.84□□□□□ -0.19
UFD1-210ENST00000494054 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.19
UFD1-210ENST00000494054 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
UFD1-210ENST00000494054 COL5A2P05997 1499 aaPredicted RBP13.82□□□□□ -0.2
UFD1-210ENST00000494054 CD163L1Q9NR16 1453 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
UFD1-210ENST00000494054 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 TESK2Q96S53 571 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 SLC12A5Q9H2X9 1139 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 AXIN2Q9Y2T1 843 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 TTC21AQ8NDW8 1320 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 AATKQ6ZMQ8 1374 aa13.82□□□□□ -0.2
UFD1-210ENST00000494054 ST20-MTHFSA0A0A6YYL1 179 aa13.81□□□□□ -0.2
UFD1-210ENST00000494054 SOX12O15370 315 aa13.81□□□□□ -0.2
UFD1-210ENST00000494054 ARHGEF25Q86VW2 580 aa13.81□□□□□ -0.2
UFD1-210ENST00000494054 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
UFD1-210ENST00000494054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
UFD1-210ENST00000494054 COL18A1P39060 1754 aa13.8□□□□□ -0.2
UFD1-210ENST00000494054 MON2Q7Z3U7 1717 aa13.79□□□□□ -0.2
UFD1-210ENST00000494054 NME9Q86XW9 330 aa13.79□□□□□ -0.2
UFD1-210ENST00000494054 KCNH5Q8NCM2 988 aa13.79□□□□□ -0.2
UFD1-210ENST00000494054 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
UFD1-210ENST00000494054 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
UFD1-210ENST00000494054 CRB1P82279 1406 aa13.78□□□□□ -0.2
UFD1-210ENST00000494054 NFAT5O94916 1531 aa13.77□□□□□ -0.21
UFD1-210ENST00000494054 BAG6P46379 1132 aa13.77□□□□□ -0.21
UFD1-210ENST00000494054 EN1Q05925 392 aaPredicted RBP13.77□□□□□ -0.21
UFD1-210ENST00000494054 PDE3BQ13370 1112 aa13.77□□□□□ -0.21
UFD1-210ENST00000494054 FAM196AQ6ZSG2 479 aa13.77□□□□□ -0.21
UFD1-210ENST00000494054 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
UFD1-210ENST00000494054 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
UFD1-210ENST00000494054 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
UFD1-210ENST00000494054 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms