RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 SRPK2P78362 688 aaKnown RBP8.97□□□□□ -0.97
FNDC3B-212ENST00000494000 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
FNDC3B-212ENST00000494000 ATP7BP35670 1465 aa8.97□□□□□ -0.97
FNDC3B-212ENST00000494000 NAP1L5Q96NT1 182 aaPredicted RBP8.97□□□□□ -0.97
FNDC3B-212ENST00000494000 XRN1Q8IZH2 1706 aaKnown RBP8.96□□□□□ -0.97
FNDC3B-212ENST00000494000 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
FNDC3B-212ENST00000494000 CDK19Q9BWU1 502 aa8.96□□□□□ -0.98
FNDC3B-212ENST00000494000 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.98
FNDC3B-212ENST00000494000 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.98
FNDC3B-212ENST00000494000 WASLO00401 505 aaPredicted RBP8.95□□□□□ -0.98
FNDC3B-212ENST00000494000 KCTD17Q8N5Z5 321 aa8.95□□□□□ -0.98
FNDC3B-212ENST00000494000 CERS3Q8IU89 383 aa8.95□□□□□ -0.98
FNDC3B-212ENST00000494000 NSD3Q9BZ95 1437 aa8.94□□□□□ -0.98
FNDC3B-212ENST00000494000 RSPH6AQ9H0K4 717 aa8.94□□□□□ -0.98
FNDC3B-212ENST00000494000 NPHP4O75161 1426 aaPredicted RBP8.94□□□□□ -0.98
FNDC3B-212ENST00000494000 CHD2O14647 1828 aaKnown RBP8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 SLC12A5Q9H2X9 1139 aa8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 CABP2Q9NPB3 220 aa8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 BCCIPQ9P287 314 aaKnown RBP eCLIP8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 AMOTL2Q9Y2J4 779 aa8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 RBM10P98175 930 aaKnown RBP8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 SAFB2Q14151 953 aaKnown RBP eCLIP8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 CC2D1BQ5T0F9 858 aaKnown RBP8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 ROBO2Q9HCK4 1378 aa8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 PTPRUQ92729 1446 aa8.93□□□□□ -0.98
FNDC3B-212ENST00000494000 ANKRD26Q9UPS8 1709 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 ZBTB7CA1YPR0 619 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 WAPLQ7Z5K2 1190 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 PNISRQ8TF01 805 aaKnown RBP8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 ITSN1Q15811 1721 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 SLC26A8Q96RN1 970 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 CARD14Q9BXL6 1004 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 PLEKHH1Q9ULM0 1364 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 CCDC61Q9Y6R9 512 aa8.92□□□□□ -0.98
FNDC3B-212ENST00000494000 ANKARQ7Z5J8 1434 aa8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 FAM177A1Q8N128 213 aaPredicted RBP8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 RGS22Q8NE09 1264 aa8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 PPP2R1AP30153 589 aa8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 PRDM16Q9HAZ2 1276 aa8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 NWD1Q149M9 1564 aa8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 CDC42BPGQ6DT37 1551 aa8.91□□□□□ -0.98
FNDC3B-212ENST00000494000 A0A1W2PP64 1363 aa8.9□□□□□ -0.98
FNDC3B-212ENST00000494000 EDC4Q6P2E9 1401 aaKnown RBP8.9□□□□□ -0.98
FNDC3B-212ENST00000494000 TOPAZ1Q8N9V7 1692 aa8.9□□□□□ -0.98
FNDC3B-212ENST00000494000 ZBED9Q6R2W3 1325 aa8.9□□□□□ -0.98
FNDC3B-212ENST00000494000 MORC1Q86VD1 984 aa8.9□□□□□ -0.98
FNDC3B-212ENST00000494000 FAM9BQ8IZU0 186 aa8.9□□□□□ -0.98
FNDC3B-212ENST00000494000 NUDT16Q96DE0 195 aaKnown RBP8.9□□□□□ -0.98
FNDC3B-212ENST00000494000 AKAP12Q02952 1782 aa8.9□□□□□ -0.99
FNDC3B-212ENST00000494000 CPSF1Q10570 1443 aaKnown RBP8.9□□□□□ -0.99
FNDC3B-212ENST00000494000 PPIP5K1Q6PFW1 1433 aa8.9□□□□□ -0.99
FNDC3B-212ENST00000494000 POLR3AO14802 1390 aaPredicted RBP8.9□□□□□ -0.99
FNDC3B-212ENST00000494000 KIF20BQ96Q89 1820 aa8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 HNRNPUQ00839 825 aaKnown RBP eCLIP8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 USP35Q9P2H5 1018 aa8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 CD163L1Q9NR16 1453 aa8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 MON2Q7Z3U7 1717 aa8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 PLEKHG3A1L390 1219 aa8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 CCDC184Q52MB2 194 aa8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 NGEFQ8N5V2 710 aa8.89□□□□□ -0.99
FNDC3B-212ENST00000494000 NKTRP30414 1462 aaKnown RBP8.88□□□□□ -0.99
FNDC3B-212ENST00000494000 KCNA6P17658 529 aa8.88□□□□□ -0.99
FNDC3B-212ENST00000494000 CFAP53Q96M91 514 aa8.88□□□□□ -0.99
FNDC3B-212ENST00000494000 CABP1Q9NZU7 370 aa8.88□□□□□ -0.99
FNDC3B-212ENST00000494000 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
FNDC3B-212ENST00000494000 CNPY4Q8N129 248 aa8.88□□□□□ -0.99
FNDC3B-212ENST00000494000 WDR43Q15061 677 aaKnown RBP eCLIP8.87□□□□□ -0.99
FNDC3B-212ENST00000494000 FMN2Q9NZ56 1722 aa8.87□□□□□ -0.99
FNDC3B-212ENST00000494000 BLMP54132 1417 aaPredicted RBP8.86□□□□□ -0.99
FNDC3B-212ENST00000494000 CNGB1Q14028 1251 aaPredicted RBP8.86□□□□□ -0.99
FNDC3B-212ENST00000494000 ADGRL3Q9HAR2 1447 aa8.86□□□□□ -0.99
FNDC3B-212ENST00000494000 TTC21AQ8NDW8 1320 aa8.85□□□□□ -0.99
FNDC3B-212ENST00000494000 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
FNDC3B-212ENST00000494000 FYB1O15117 783 aa8.84□□□□□ -0.99
FNDC3B-212ENST00000494000 TICAM2Q86XR7 235 aa8.84□□□□□ -0.99
FNDC3B-212ENST00000494000 NCKAP5LQ9HCH0 1330 aa8.84□□□□□ -0.99
FNDC3B-212ENST00000494000 AATKQ6ZMQ8 1374 aa8.84□□□□□ -0.99
FNDC3B-212ENST00000494000 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -1
FNDC3B-212ENST00000494000 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 NALCNQ8IZF0 1738 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 NRKQ7Z2Y5 1582 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 KDM4FA0A1W2PPD8 638 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 PNNQ9H307 717 aaKnown RBP8.83□□□□□ -1
FNDC3B-212ENST00000494000 NUDCQ9Y266 331 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 DCCP43146 1447 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 KDM4AO75164 1064 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 FOXD4L1Q9NU39 408 aa8.83□□□□□ -1
FNDC3B-212ENST00000494000 LRRC7Q96NW7 1537 aa8.82□□□□□ -1
FNDC3B-212ENST00000494000 USP6P35125 1406 aa8.82□□□□□ -1
FNDC3B-212ENST00000494000 COG3Q96JB2 828 aa8.82□□□□□ -1
FNDC3B-212ENST00000494000 ACEP12821 1306 aa8.82□□□□□ -1
FNDC3B-212ENST00000494000 PPM1GO15355 546 aaPredicted RBP8.82□□□□□ -1
FNDC3B-212ENST00000494000 LMTK3Q96Q04 1460 aa8.81□□□□□ -1
FNDC3B-212ENST00000494000 APBB1O00213 710 aa8.81□□□□□ -1
FNDC3B-212ENST00000494000 USP54Q70EL1 1684 aa8.81□□□□□ -1
FNDC3B-212ENST00000494000 SMG6Q86US8 1419 aaKnown RBP8.81□□□□□ -1
FNDC3B-212ENST00000494000 MTHFSP49914 203 aa8.81□□□□□ -1
FNDC3B-212ENST00000494000 DMRT2Q9Y5R5 561 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms