RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 USTQ9Y2C2 406 aa10.9□□□□□ -0.66
SMC2-205ENST00000493955 CSB-PGBD3P0DP91 1061 aa10.89□□□□□ -0.67
SMC2-205ENST00000493955 NR1H3Q13133 447 aa10.89□□□□□ -0.67
SMC2-205ENST00000493955 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
SMC2-205ENST00000493955 TFIP11Q9UBB9 837 aaKnown RBP10.89□□□□□ -0.67
SMC2-205ENST00000493955 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
SMC2-205ENST00000493955 NR1I2O75469 434 aa10.88□□□□□ -0.67
SMC2-205ENST00000493955 RGS20O76081 388 aa10.88□□□□□ -0.67
SMC2-205ENST00000493955 FMNL1O95466 1100 aaPredicted RBP10.88□□□□□ -0.67
SMC2-205ENST00000493955 SCUBE3Q8IX30 993 aa10.88□□□□□ -0.67
SMC2-205ENST00000493955 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
SMC2-205ENST00000493955 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
SMC2-205ENST00000493955 BCAMP50895 628 aa10.87□□□□□ -0.67
SMC2-205ENST00000493955 THAP11Q96EK4 314 aa10.87□□□□□ -0.67
SMC2-205ENST00000493955 FKBPLQ9UIM3 349 aa10.87□□□□□ -0.67
SMC2-205ENST00000493955 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
SMC2-205ENST00000493955 JUNDP17535 347 aa10.86□□□□□ -0.67
SMC2-205ENST00000493955 PTPRNQ16849 979 aa10.86□□□□□ -0.67
SMC2-205ENST00000493955 MAFBQ9Y5Q3 323 aaPredicted RBP10.86□□□□□ -0.67
SMC2-205ENST00000493955 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
SMC2-205ENST00000493955 ZBBXA8MT70 800 aa10.85□□□□□ -0.67
SMC2-205ENST00000493955 RANGAP1P46060 587 aaPredicted RBP10.84□□□□□ -0.67
SMC2-205ENST00000493955 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
SMC2-205ENST00000493955 WNT2BQ93097 391 aa10.84□□□□□ -0.67
SMC2-205ENST00000493955 MAP10Q9P2G4 905 aa10.84□□□□□ -0.67
SMC2-205ENST00000493955 ATP9BO43861 1147 aa10.84□□□□□ -0.67
SMC2-205ENST00000493955 TBC1D9Q6ZT07 1266 aa10.84□□□□□ -0.67
SMC2-205ENST00000493955 PATL2C9JE40 543 aaKnown RBP10.83□□□□□ -0.68
SMC2-205ENST00000493955 THSD4Q6ZMP0 1018 aa10.83□□□□□ -0.68
SMC2-205ENST00000493955 A0A0G2JS52 829 aa10.82□□□□□ -0.68
SMC2-205ENST00000493955 ATG7O95352 703 aa10.82□□□□□ -0.68
SMC2-205ENST00000493955 BRD1O95696 1058 aa10.81□□□□□ -0.68
SMC2-205ENST00000493955 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
SMC2-205ENST00000493955 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
SMC2-205ENST00000493955 CTHP32929 405 aa10.8□□□□□ -0.68
SMC2-205ENST00000493955 CCNYL3P0C7X3 344 aa10.79□□□□□ -0.68
SMC2-205ENST00000493955 DXOO77932 396 aaKnown RBP10.78□□□□□ -0.68
SMC2-205ENST00000493955 KCNA1Q09470 495 aa10.78□□□□□ -0.68
SMC2-205ENST00000493955 CDCA8Q53HL2 280 aa10.78□□□□□ -0.68
SMC2-205ENST00000493955 NFATC2IPQ8NCF5 419 aa10.78□□□□□ -0.68
SMC2-205ENST00000493955 GZF1Q9H116 711 aaPredicted RBP10.78□□□□□ -0.68
SMC2-205ENST00000493955 WBP1LQ9NX94 342 aa10.78□□□□□ -0.68
SMC2-205ENST00000493955 TMCO4Q5TGY1 634 aa10.77□□□□□ -0.68
SMC2-205ENST00000493955 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.68
SMC2-205ENST00000493955 SPSB2Q99619 263 aa10.77□□□□□ -0.68
SMC2-205ENST00000493955 GPSM3Q9Y4H4 160 aa10.77□□□□□ -0.68
SMC2-205ENST00000493955 PIK3CDO00329 1044 aa10.76□□□□□ -0.69
SMC2-205ENST00000493955 ZNF592Q92610 1267 aa10.76□□□□□ -0.69
SMC2-205ENST00000493955 GPKOWQ92917 476 aaPredicted RBP eCLIP10.76□□□□□ -0.69
SMC2-205ENST00000493955 NUDT12Q9BQG2 462 aa10.76□□□□□ -0.69
SMC2-205ENST00000493955 EVA1BQ9NVM1 165 aa10.76□□□□□ -0.69
SMC2-205ENST00000493955 MMP16P51512 607 aa10.75□□□□□ -0.69
SMC2-205ENST00000493955 FAM160A2Q8N612 972 aaPredicted RBP10.75□□□□□ -0.69
SMC2-205ENST00000493955 VRTNQ9H8Y1 702 aa10.75□□□□□ -0.69
SMC2-205ENST00000493955 CARNS1A5YM72 827 aa10.75□□□□□ -0.69
SMC2-205ENST00000493955 KCNH2Q12809 1159 aa10.75□□□□□ -0.69
SMC2-205ENST00000493955 NBPF14Q5TI25 921 aa10.75□□□□□ -0.69
SMC2-205ENST00000493955 PDXDC2PQ6P474 469 aa10.75□□□□□ -0.69
SMC2-205ENST00000493955 USP17L3A6NCW0 530 aa10.74□□□□□ -0.69
SMC2-205ENST00000493955 USP17L4A6NCW7 530 aa10.74□□□□□ -0.69
SMC2-205ENST00000493955 TMEM88BA6NKF7 163 aa10.74□□□□□ -0.69
SMC2-205ENST00000493955 COPS2P61201 443 aa10.74□□□□□ -0.69
SMC2-205ENST00000493955 PTK2Q05397 1052 aa10.74□□□□□ -0.69
SMC2-205ENST00000493955 KANK4Q5T7N3 995 aaPredicted RBP10.74□□□□□ -0.69
SMC2-205ENST00000493955 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
SMC2-205ENST00000493955 USP17L1Q7RTZ2 530 aa10.74□□□□□ -0.69
SMC2-205ENST00000493955 USP17L5A8MUK1 530 aa10.73□□□□□ -0.69
SMC2-205ENST00000493955 SKIP12755 728 aa10.73□□□□□ -0.69
SMC2-205ENST00000493955 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
SMC2-205ENST00000493955 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
SMC2-205ENST00000493955 MCCD1P59942 119 aaPredicted RBP10.71□□□□□ -0.69
SMC2-205ENST00000493955 ELOAQ14241 798 aaKnown RBP10.71□□□□□ -0.69
SMC2-205ENST00000493955 FAM174AQ8TBP5 190 aa10.71□□□□□ -0.69
SMC2-205ENST00000493955 ADH1BP00325 375 aa10.69□□□□□ -0.7
SMC2-205ENST00000493955 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
SMC2-205ENST00000493955 NYAP1Q6ZVC0 841 aa10.69□□□□□ -0.7
SMC2-205ENST00000493955 OCSTAMPQ9BR26 566 aa10.69□□□□□ -0.7
SMC2-205ENST00000493955 CEP126Q9P2H0 1117 aa10.69□□□□□ -0.7
SMC2-205ENST00000493955 PCDHB9Q9Y5E1 797 aa10.69□□□□□ -0.7
SMC2-205ENST00000493955 TLL1O43897 1013 aa10.68□□□□□ -0.7
SMC2-205ENST00000493955 MFAP1P55081 439 aaKnown RBP10.68□□□□□ -0.7
SMC2-205ENST00000493955 ZPR1O75312 459 aa10.67□□□□□ -0.7
SMC2-205ENST00000493955 B4GALNT3Q6L9W6 998 aa10.67□□□□□ -0.7
SMC2-205ENST00000493955 DEPDC4Q8N2C3 294 aa10.67□□□□□ -0.7
SMC2-205ENST00000493955 ZMIZ1Q9ULJ6 1067 aa10.67□□□□□ -0.7
SMC2-205ENST00000493955 RNF135Q8IUD6 432 aa10.67□□□□□ -0.7
SMC2-205ENST00000493955 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
SMC2-205ENST00000493955 ARHGAP9Q9BRR9 750 aa10.67□□□□□ -0.7
SMC2-205ENST00000493955 NOVA2Q9UNW9 492 aaKnown RBP10.67□□□□□ -0.7
SMC2-205ENST00000493955 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
SMC2-205ENST00000493955 TMEM164Q5U3C3 297 aa10.66□□□□□ -0.7
SMC2-205ENST00000493955 UNC93B1Q9H1C4 597 aa10.66□□□□□ -0.7
SMC2-205ENST00000493955 NCOA4Q13772 614 aa10.65□□□□□ -0.7
SMC2-205ENST00000493955 Q6ZNB5 142 aa10.65□□□□□ -0.7
SMC2-205ENST00000493955 RGS22Q8NE09 1264 aa10.65□□□□□ -0.7
SMC2-205ENST00000493955 STK32AQ8WU08 396 aa10.65□□□□□ -0.7
SMC2-205ENST00000493955 MKRN1Q9UHC7 482 aaKnown RBP10.65□□□□□ -0.7
SMC2-205ENST00000493955 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.7
SMC2-205ENST00000493955 USP17L15C9J2P7 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L10C9JJH3 530 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms