RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.04
PDLIM1-205ENST00000493949 A0A0G2JS52 829 aa15.27■□□□□ 0.04
PDLIM1-205ENST00000493949 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
PDLIM1-205ENST00000493949 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
PDLIM1-205ENST00000493949 CABLES1Q8TDN4 633 aa15.27■□□□□ 0.04
PDLIM1-205ENST00000493949 CAMTA1Q9Y6Y1 1673 aa15.27■□□□□ 0.03
PDLIM1-205ENST00000493949 CHD4Q14839 1912 aa15.26■□□□□ 0.03
PDLIM1-205ENST00000493949 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
PDLIM1-205ENST00000493949 ARHGEF10O15013 1369 aa15.25■□□□□ 0.03
PDLIM1-205ENST00000493949 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
PDLIM1-205ENST00000493949 PSME1Q06323 249 aa15.25■□□□□ 0.03
PDLIM1-205ENST00000493949 FAM182BQ5T319 152 aa15.25■□□□□ 0.03
PDLIM1-205ENST00000493949 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
PDLIM1-205ENST00000493949 ITGAEP38570 1179 aa15.24■□□□□ 0.03
PDLIM1-205ENST00000493949 SPATA31A5Q5VU36 1347 aa15.23■□□□□ 0.03
PDLIM1-205ENST00000493949 SPATA31A7Q8IWB4 1347 aa15.23■□□□□ 0.03
PDLIM1-205ENST00000493949 NRXN1Q9ULB1 1477 aa15.23■□□□□ 0.03
PDLIM1-205ENST00000493949 ABCB7O75027 752 aa15.23■□□□□ 0.03
PDLIM1-205ENST00000493949 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
PDLIM1-205ENST00000493949 ZNF784Q8NCA9 323 aaPredicted RBP15.22■□□□□ 0.03
PDLIM1-205ENST00000493949 BTG4Q9NY30 223 aa15.22■□□□□ 0.03
PDLIM1-205ENST00000493949 RRBP1Q9P2E9 1410 aaKnown RBP15.22■□□□□ 0.03
PDLIM1-205ENST00000493949 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
PDLIM1-205ENST00000493949 TRPM3Q9HCF6 1732 aaPredicted RBP15.21■□□□□ 0.03
PDLIM1-205ENST00000493949 CRYBG1Q9Y4K1 1723 aa15.21■□□□□ 0.03
PDLIM1-205ENST00000493949 KCNQ2O43526 872 aa15.21■□□□□ 0.03
PDLIM1-205ENST00000493949 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
PDLIM1-205ENST00000493949 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.03
PDLIM1-205ENST00000493949 ALS2Q96Q42 1657 aa15.21■□□□□ 0.03
PDLIM1-205ENST00000493949 UTRNP46939 3433 aa15.21■□□□□ 0.02
PDLIM1-205ENST00000493949 CEP350Q5VT06 3117 aa15.21■□□□□ 0.02
PDLIM1-205ENST00000493949 SENP3-EIF4A1A0A087X0R7 540 aa15.2■□□□□ 0.02
PDLIM1-205ENST00000493949 TRIM37O94972 964 aa15.2■□□□□ 0.02
PDLIM1-205ENST00000493949 PPP1R1BQ9UD71 204 aaPredicted RBP15.2■□□□□ 0.02
PDLIM1-205ENST00000493949 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
PDLIM1-205ENST00000493949 APBA3O96018 575 aa15.19■□□□□ 0.02
PDLIM1-205ENST00000493949 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
PDLIM1-205ENST00000493949 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
PDLIM1-205ENST00000493949 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
PDLIM1-205ENST00000493949 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
PDLIM1-205ENST00000493949 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
PDLIM1-205ENST00000493949 CASZ1Q86V15 1759 aa15.17■□□□□ 0.02
PDLIM1-205ENST00000493949 C1QTNF8P60827 252 aa15.17■□□□□ 0.02
PDLIM1-205ENST00000493949 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
PDLIM1-205ENST00000493949 SPATA31A1Q5TZJ5 1347 aa15.15■□□□□ 0.02
PDLIM1-205ENST00000493949 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
PDLIM1-205ENST00000493949 STK26Q9P289 416 aa15.14■□□□□ 0.01
PDLIM1-205ENST00000493949 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
PDLIM1-205ENST00000493949 NRKQ7Z2Y5 1582 aa15.13■□□□□ 0.01
PDLIM1-205ENST00000493949 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
PDLIM1-205ENST00000493949 ANKARQ7Z5J8 1434 aa15.11■□□□□ 0.01
PDLIM1-205ENST00000493949 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-205ENST00000493949 MYOM1P52179 1685 aa15.1■□□□□ 0.01
PDLIM1-205ENST00000493949 SBF2Q86WG5 1849 aa15.09■□□□□ 0.01
PDLIM1-205ENST00000493949 PIK3C2GO75747 1445 aa15.09■□□□□ 0.01
PDLIM1-205ENST00000493949 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0
PDLIM1-205ENST00000493949 BARGINQ6ZT62 677 aa15.08■□□□□ 0
PDLIM1-205ENST00000493949 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
PDLIM1-205ENST00000493949 PARP4Q9UKK3 1724 aaKnown RBP15.07■□□□□ 0
PDLIM1-205ENST00000493949 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
PDLIM1-205ENST00000493949 PHRF1Q9P1Y6 1649 aaKnown RBP15.06■□□□□ 0
PDLIM1-205ENST00000493949 DHX57Q6P158 1386 aaKnown RBP15.06■□□□□ 0
PDLIM1-205ENST00000493949 PEAK1Q9H792 1746 aa15.06■□□□□ 0
PDLIM1-205ENST00000493949 PTGER2P43116 358 aa15.05■□□□□ -0
PDLIM1-205ENST00000493949 PDE3BQ13370 1112 aa15.05■□□□□ -0
PDLIM1-205ENST00000493949 PMFBP1Q8TBY8 1022 aa15.05■□□□□ -0
PDLIM1-205ENST00000493949 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
PDLIM1-205ENST00000493949 GPRASP1Q5JY77 1395 aa15.04■□□□□ -0
PDLIM1-205ENST00000493949 C11orf95C9JLR9 678 aaPredicted RBP15.04■□□□□ -0
PDLIM1-205ENST00000493949 PLSCR1O15162 318 aa15.04■□□□□ -0
PDLIM1-205ENST00000493949 KIAA0232Q92628 1395 aa15.03■□□□□ -0
PDLIM1-205ENST00000493949 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
PDLIM1-205ENST00000493949 SYT17Q9BSW7 474 aa15.02■□□□□ -0
PDLIM1-205ENST00000493949 ANO8Q9HCE9 1232 aaPredicted RBP15.02■□□□□ -0
PDLIM1-205ENST00000493949 DLC1Q96QB1 1528 aa15.02□□□□□ -0.01
PDLIM1-205ENST00000493949 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
PDLIM1-205ENST00000493949 MIER1Q8N108 512 aa15.01□□□□□ -0.01
PDLIM1-205ENST00000493949 LMO7Q8WWI1 1683 aa15□□□□□ -0.01
PDLIM1-205ENST00000493949 PDGFDQ9GZP0 370 aaPredicted RBP15□□□□□ -0.01
PDLIM1-205ENST00000493949 STRN4Q9NRL3 753 aa15□□□□□ -0.01
PDLIM1-205ENST00000493949 FHDC1Q9C0D6 1143 aaPredicted RBP14.99□□□□□ -0.01
PDLIM1-205ENST00000493949 TULP4Q9NRJ4 1543 aa14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 CHRNA2Q15822 529 aa14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 C14orf93Q9H972 538 aaKnown RBP14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 THRAP3Q9Y2W1 955 aaKnown RBP14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 OVOS2A0A0J9YW53 1432 aa14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 OVOS2Q6IE36 1432 aa14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
PDLIM1-205ENST00000493949 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
PDLIM1-205ENST00000493949 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
PDLIM1-205ENST00000493949 TCP11L2Q8N4U5 519 aa14.97□□□□□ -0.01
PDLIM1-205ENST00000493949 PRAM1Q96QH2 718 aa14.97□□□□□ -0.01
PDLIM1-205ENST00000493949 SGIP1Q9BQI5 828 aa14.97□□□□□ -0.01
PDLIM1-205ENST00000493949 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
PDLIM1-205ENST00000493949 ITSN1Q15811 1721 aa14.97□□□□□ -0.01
PDLIM1-205ENST00000493949 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.01
PDLIM1-205ENST00000493949 RGL3Q3MIN7 710 aa14.96□□□□□ -0.01
PDLIM1-205ENST00000493949 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms