RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
GTF3A-208ENST00000493903 IFFO2Q5TF58 517 aa7.37□□□□□ -1.23
GTF3A-208ENST00000493903 FOXD4L5Q5VV16 416 aaPredicted RBP7.37□□□□□ -1.23
GTF3A-208ENST00000493903 FOXD4L4Q8WXT5 416 aaPredicted RBP7.37□□□□□ -1.23
GTF3A-208ENST00000493903 TRIM34Q9BYJ4 488 aa7.37□□□□□ -1.23
GTF3A-208ENST00000493903 PALM3A6NDB9 673 aaPredicted RBP7.36□□□□□ -1.23
GTF3A-208ENST00000493903 GPR37L1O60883 481 aa7.36□□□□□ -1.23
GTF3A-208ENST00000493903 FDX1P10109 184 aa7.36□□□□□ -1.23
GTF3A-208ENST00000493903 HELBQ8NG08 1087 aaPredicted RBP7.36□□□□□ -1.23
GTF3A-208ENST00000493903 E9PSI1 815 aa7.35□□□□□ -1.23
GTF3A-208ENST00000493903 ATG7O95352 703 aa7.35□□□□□ -1.23
GTF3A-208ENST00000493903 CTDSPL2Q05D32 466 aa7.34□□□□□ -1.23
GTF3A-208ENST00000493903 CCDC27Q2M243 656 aa7.34□□□□□ -1.23
GTF3A-208ENST00000493903 RNF19BQ6ZMZ0 732 aa7.34□□□□□ -1.23
GTF3A-208ENST00000493903 THAP11Q96EK4 314 aa7.34□□□□□ -1.23
GTF3A-208ENST00000493903 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
GTF3A-208ENST00000493903 HMX1Q9NP08 348 aaPredicted RBP7.34□□□□□ -1.23
GTF3A-208ENST00000493903 A0A0G2JS52 829 aa7.33□□□□□ -1.24
GTF3A-208ENST00000493903 LMOD1P29536 600 aaPredicted RBP7.33□□□□□ -1.24
GTF3A-208ENST00000493903 VAC14Q08AM6 782 aa7.33□□□□□ -1.24
GTF3A-208ENST00000493903 MTMR2Q13614 643 aa7.33□□□□□ -1.24
GTF3A-208ENST00000493903 B4GALNT3Q6L9W6 998 aa7.33□□□□□ -1.24
GTF3A-208ENST00000493903 SND1Q7KZF4 910 aaKnown RBP eCLIP7.33□□□□□ -1.24
GTF3A-208ENST00000493903 FMNL1O95466 1100 aaPredicted RBP7.32□□□□□ -1.24
GTF3A-208ENST00000493903 ADH1BP00325 375 aa7.32□□□□□ -1.24
GTF3A-208ENST00000493903 SPSB2Q99619 263 aa7.32□□□□□ -1.24
GTF3A-208ENST00000493903 PCDHGC3Q9UN70 934 aa7.32□□□□□ -1.24
GTF3A-208ENST00000493903 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
GTF3A-208ENST00000493903 Q3C1V9 767 aa7.31□□□□□ -1.24
GTF3A-208ENST00000493903 PPP1R18Q6NYC8 613 aa7.31□□□□□ -1.24
GTF3A-208ENST00000493903 BRICD5Q6PL45 260 aa7.31□□□□□ -1.24
GTF3A-208ENST00000493903 PNMA1Q8ND90 353 aa7.31□□□□□ -1.24
GTF3A-208ENST00000493903 SYMPKQ92797 1274 aaKnown RBP7.31□□□□□ -1.24
GTF3A-208ENST00000493903 TFIP11Q9UBB9 837 aaKnown RBP7.31□□□□□ -1.24
GTF3A-208ENST00000493903 GNEQ9Y223 722 aaKnown RBP7.31□□□□□ -1.24
GTF3A-208ENST00000493903 TMEM88BA6NKF7 163 aa7.3□□□□□ -1.24
GTF3A-208ENST00000493903 S1PR4O95977 384 aa7.3□□□□□ -1.24
GTF3A-208ENST00000493903 PRR7Q8TB68 274 aa7.3□□□□□ -1.24
GTF3A-208ENST00000493903 ZNF428Q96B54 188 aa7.3□□□□□ -1.24
GTF3A-208ENST00000493903 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
GTF3A-208ENST00000493903 SALL2Q9Y467 1007 aaPredicted RBP7.3□□□□□ -1.24
GTF3A-208ENST00000493903 SEMA3FQ13275 785 aa7.29□□□□□ -1.24
GTF3A-208ENST00000493903 FAM160A2Q8N612 972 aaPredicted RBP7.29□□□□□ -1.24
GTF3A-208ENST00000493903 LRRN4Q8WUT4 740 aa7.29□□□□□ -1.24
GTF3A-208ENST00000493903 SLC6A16Q9GZN6 736 aa7.29□□□□□ -1.24
GTF3A-208ENST00000493903 PRDM9Q9NQV7 894 aa7.29□□□□□ -1.24
GTF3A-208ENST00000493903 MAFBQ9Y5Q3 323 aaPredicted RBP7.29□□□□□ -1.24
GTF3A-208ENST00000493903 C6orf229H3BNL8 230 aa7.28□□□□□ -1.24
GTF3A-208ENST00000493903 ELOAQ14241 798 aaKnown RBP7.28□□□□□ -1.24
GTF3A-208ENST00000493903 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.28□□□□□ -1.24
GTF3A-208ENST00000493903 CFAP99D6REC4 459 aa7.27□□□□□ -1.25
GTF3A-208ENST00000493903 RNF223E7ERA6 249 aa7.27□□□□□ -1.25
GTF3A-208ENST00000493903 PPEF1O14829 653 aaPredicted RBP7.27□□□□□ -1.25
GTF3A-208ENST00000493903 ATP9BO43861 1147 aa7.27□□□□□ -1.25
GTF3A-208ENST00000493903 GGCXP38435 758 aa7.27□□□□□ -1.25
GTF3A-208ENST00000493903 EIF4G2P78344 907 aaKnown RBP eCLIP7.27□□□□□ -1.25
GTF3A-208ENST00000493903 USB1Q9BQ65 265 aaKnown RBP7.27□□□□□ -1.25
GTF3A-208ENST00000493903 TSC1Q92574 1164 aa7.26□□□□□ -1.25
GTF3A-208ENST00000493903 CARNS1A5YM72 827 aa7.25□□□□□ -1.25
GTF3A-208ENST00000493903 MSS51Q4VC12 460 aa7.25□□□□□ -1.25
GTF3A-208ENST00000493903 RETREG3Q86VR2 466 aa7.25□□□□□ -1.25
GTF3A-208ENST00000493903 TBC1D9Q6ZT07 1266 aa7.24□□□□□ -1.25
GTF3A-208ENST00000493903 NFATC2IPQ8NCF5 419 aa7.24□□□□□ -1.25
GTF3A-208ENST00000493903 EPS8L1Q8TE68 723 aa7.24□□□□□ -1.25
GTF3A-208ENST00000493903 NR6A1Q15406 480 aa7.23□□□□□ -1.25
GTF3A-208ENST00000493903 CDCA8Q53HL2 280 aa7.23□□□□□ -1.25
GTF3A-208ENST00000493903 DESI1Q6ICB0 168 aa7.23□□□□□ -1.25
GTF3A-208ENST00000493903 CCER1Q8TC90 406 aaPredicted RBP7.23□□□□□ -1.25
GTF3A-208ENST00000493903 DXOO77932 396 aaKnown RBP7.22□□□□□ -1.25
GTF3A-208ENST00000493903 ERCC3P19447 782 aa7.22□□□□□ -1.25
GTF3A-208ENST00000493903 NR1H3Q13133 447 aa7.22□□□□□ -1.25
GTF3A-208ENST00000493903 KANK4Q5T7N3 995 aaPredicted RBP7.22□□□□□ -1.25
GTF3A-208ENST00000493903 ANKLE1Q8NAG6 615 aa7.22□□□□□ -1.25
GTF3A-208ENST00000493903 FCF1Q9Y324 198 aaKnown RBP7.22□□□□□ -1.25
GTF3A-208ENST00000493903 SHROOM4Q9ULL8 1493 aa7.22□□□□□ -1.25
GTF3A-208ENST00000493903 IGSF3O75054 1194 aa7.21□□□□□ -1.26
GTF3A-208ENST00000493903 MMP16P51512 607 aa7.21□□□□□ -1.26
GTF3A-208ENST00000493903 PLA2G2CQ5R387 149 aa7.21□□□□□ -1.26
GTF3A-208ENST00000493903 JUNDP17535 347 aa7.2□□□□□ -1.26
GTF3A-208ENST00000493903 TXNDC2Q86VQ3 553 aa7.2□□□□□ -1.26
GTF3A-208ENST00000493903 EMID1Q96A84 441 aaPredicted RBP7.2□□□□□ -1.26
GTF3A-208ENST00000493903 RBM47A0AV96 593 aaKnown RBP7.19□□□□□ -1.26
GTF3A-208ENST00000493903 PLEKHM2Q8IWE5 1019 aa7.19□□□□□ -1.26
GTF3A-208ENST00000493903 PRKD2Q9BZL6 878 aa7.19□□□□□ -1.26
GTF3A-208ENST00000493903 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
GTF3A-208ENST00000493903 PER1O15534 1290 aaPredicted RBP7.18□□□□□ -1.26
GTF3A-208ENST00000493903 RGS20O76081 388 aa7.18□□□□□ -1.26
GTF3A-208ENST00000493903 TMEM164Q5U3C3 297 aa7.18□□□□□ -1.26
GTF3A-208ENST00000493903 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
GTF3A-208ENST00000493903 ZMIZ1Q9ULJ6 1067 aa7.18□□□□□ -1.26
GTF3A-208ENST00000493903 ZC3H4Q9UPT8 1303 aaKnown RBP7.18□□□□□ -1.26
GTF3A-208ENST00000493903 FAM196BA6NMK8 535 aa7.17□□□□□ -1.26
GTF3A-208ENST00000493903 ZBBXA8MT70 800 aa7.17□□□□□ -1.26
GTF3A-208ENST00000493903 ARID4AP29374 1257 aaPredicted RBP7.17□□□□□ -1.26
GTF3A-208ENST00000493903 LYPD8Q6UX82 237 aa7.17□□□□□ -1.26
GTF3A-208ENST00000493903 LIAT1Q6ZQX7 453 aa7.17□□□□□ -1.26
GTF3A-208ENST00000493903 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
GTF3A-208ENST00000493903 NOVA2Q9UNW9 492 aaKnown RBP7.17□□□□□ -1.26
GTF3A-208ENST00000493903 USP17L3A6NCW0 530 aa7.16□□□□□ -1.26
GTF3A-208ENST00000493903 USP17L4A6NCW7 530 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 340.1 ms