RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
SEMA3F-209ENST00000493743 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
SEMA3F-209ENST00000493743 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
SEMA3F-209ENST00000493743 PRR36Q9H6K5 1346 aa11.44□□□□□ -0.58
SEMA3F-209ENST00000493743 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
SEMA3F-209ENST00000493743 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
SEMA3F-209ENST00000493743 ONECUT3O60422 494 aaPredicted RBP11.44□□□□□ -0.58
SEMA3F-209ENST00000493743 SF3B2Q13435 895 aaKnown RBP11.43□□□□□ -0.58
SEMA3F-209ENST00000493743 ATP7BP35670 1465 aa11.43□□□□□ -0.58
SEMA3F-209ENST00000493743 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
SEMA3F-209ENST00000493743 HRCP23327 699 aa11.42□□□□□ -0.58
SEMA3F-209ENST00000493743 KRT27Q7Z3Y8 459 aa11.42□□□□□ -0.58
SEMA3F-209ENST00000493743 NGDNQ8NEJ9 315 aaKnown RBP11.42□□□□□ -0.58
SEMA3F-209ENST00000493743 TNS1Q9HBL0 1735 aaKnown RBP11.41□□□□□ -0.58
SEMA3F-209ENST00000493743 BTG4Q9NY30 223 aa11.41□□□□□ -0.58
SEMA3F-209ENST00000493743 LRP5O75197 1615 aa11.41□□□□□ -0.58
SEMA3F-209ENST00000493743 A0A0G2JS52 829 aa11.4□□□□□ -0.58
SEMA3F-209ENST00000493743 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
SEMA3F-209ENST00000493743 DEFB132Q7Z7B7 95 aa11.4□□□□□ -0.58
SEMA3F-209ENST00000493743 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
SEMA3F-209ENST00000493743 QRICH2Q9H0J4 1663 aa11.39□□□□□ -0.59
SEMA3F-209ENST00000493743 NUDT16Q96DE0 195 aaKnown RBP11.38□□□□□ -0.59
SEMA3F-209ENST00000493743 SPATA31A5Q5VU36 1347 aa11.37□□□□□ -0.59
SEMA3F-209ENST00000493743 SPATA31A7Q8IWB4 1347 aa11.37□□□□□ -0.59
SEMA3F-209ENST00000493743 NRKQ7Z2Y5 1582 aa11.37□□□□□ -0.59
SEMA3F-209ENST00000493743 PRDM11Q9NQV5 511 aa11.37□□□□□ -0.59
SEMA3F-209ENST00000493743 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
SEMA3F-209ENST00000493743 BAG6P46379 1132 aa11.36□□□□□ -0.59
SEMA3F-209ENST00000493743 KIAA0232Q92628 1395 aa11.36□□□□□ -0.59
SEMA3F-209ENST00000493743 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
SEMA3F-209ENST00000493743 CDK19Q9BWU1 502 aa11.35□□□□□ -0.59
SEMA3F-209ENST00000493743 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
SEMA3F-209ENST00000493743 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
SEMA3F-209ENST00000493743 ACEP12821 1306 aa11.34□□□□□ -0.59
SEMA3F-209ENST00000493743 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
SEMA3F-209ENST00000493743 CHRNA2Q15822 529 aa11.33□□□□□ -0.6
SEMA3F-209ENST00000493743 RREB1Q92766 1687 aa11.33□□□□□ -0.6
SEMA3F-209ENST00000493743 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 NBPF8Q3BBV2 869 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 FAM182BQ5T319 152 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 STRN4Q9NRL3 753 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 CAMTA1Q9Y6Y1 1673 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 SSH2Q76I76 1423 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
SEMA3F-209ENST00000493743 AKAP12Q02952 1782 aa11.31□□□□□ -0.6
SEMA3F-209ENST00000493743 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
SEMA3F-209ENST00000493743 PPIP5K1Q6PFW1 1433 aa11.31□□□□□ -0.6
SEMA3F-209ENST00000493743 NUP188Q5SRE5 1749 aa11.31□□□□□ -0.6
SEMA3F-209ENST00000493743 SBF2Q86WG5 1849 aa11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 CPDO75976 1380 aa11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 EN1Q05925 392 aaPredicted RBP11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 ABTB2Q8N961 1025 aa11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 USP19O94966 1318 aa11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 CENPJQ9HC77 1338 aaPredicted RBP11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
SEMA3F-209ENST00000493743 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
SEMA3F-209ENST00000493743 RGPD5Q99666 1765 aa11.29□□□□□ -0.6
SEMA3F-209ENST00000493743 SRCAPQ6ZRS2 3230 aa11.29□□□□□ -0.6
SEMA3F-209ENST00000493743 EVA1CP58658 441 aa11.29□□□□□ -0.6
SEMA3F-209ENST00000493743 SRPK2P78362 688 aaKnown RBP11.29□□□□□ -0.6
SEMA3F-209ENST00000493743 FAM196AQ6ZSG2 479 aa11.29□□□□□ -0.6
SEMA3F-209ENST00000493743 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 NLRP13Q86W25 1043 aa11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 SLIT3O75094 1523 aa11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 COL18A1P39060 1754 aa11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
SEMA3F-209ENST00000493743 COL5A2P05997 1499 aaPredicted RBP11.27□□□□□ -0.6
SEMA3F-209ENST00000493743 LRRC37A3O60309 1634 aa11.27□□□□□ -0.61
SEMA3F-209ENST00000493743 USP6P35125 1406 aa11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 TRIM37O94972 964 aa11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 GCP02774 474 aa11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 PDE3BQ13370 1112 aa11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 TCP11L2Q8N4U5 519 aa11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
SEMA3F-209ENST00000493743 R3HDM1Q15032 1099 aaKnown RBP11.25□□□□□ -0.61
SEMA3F-209ENST00000493743 CAMKK2Q96RR4 588 aa11.25□□□□□ -0.61
SEMA3F-209ENST00000493743 THRAP3Q9Y2W1 955 aaKnown RBP11.25□□□□□ -0.61
SEMA3F-209ENST00000493743 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
SEMA3F-209ENST00000493743 CRB1P82279 1406 aa11.25□□□□□ -0.61
SEMA3F-209ENST00000493743 APBA3O96018 575 aa11.24□□□□□ -0.61
SEMA3F-209ENST00000493743 NLRP6P59044 892 aa11.23□□□□□ -0.61
SEMA3F-209ENST00000493743 L3MBTL2Q969R5 705 aa11.23□□□□□ -0.61
SEMA3F-209ENST00000493743 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
SEMA3F-209ENST00000493743 EVC2Q86UK5 1308 aa11.23□□□□□ -0.61
SEMA3F-209ENST00000493743 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
SEMA3F-209ENST00000493743 USP54Q70EL1 1684 aa11.22□□□□□ -0.61
SEMA3F-209ENST00000493743 LTN1O94822 1766 aa11.21□□□□□ -0.61
SEMA3F-209ENST00000493743 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms