RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
VPS52-220ENST00000493674 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
VPS52-220ENST00000493674 NHSL1Q5SYE7 1610 aa17.24■□□□□ 0.35
VPS52-220ENST00000493674 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
VPS52-220ENST00000493674 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
VPS52-220ENST00000493674 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
VPS52-220ENST00000493674 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
VPS52-220ENST00000493674 C14orf37Q86TY3 774 aa17.21■□□□□ 0.35
VPS52-220ENST00000493674 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.34
VPS52-220ENST00000493674 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.34
VPS52-220ENST00000493674 FYB1O15117 783 aa17.2■□□□□ 0.34
VPS52-220ENST00000493674 NLRP13Q86W25 1043 aa17.2■□□□□ 0.34
VPS52-220ENST00000493674 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
VPS52-220ENST00000493674 LTN1O94822 1766 aa17.19■□□□□ 0.34
VPS52-220ENST00000493674 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
VPS52-220ENST00000493674 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
VPS52-220ENST00000493674 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
VPS52-220ENST00000493674 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
VPS52-220ENST00000493674 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
VPS52-220ENST00000493674 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
VPS52-220ENST00000493674 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
VPS52-220ENST00000493674 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
VPS52-220ENST00000493674 ATF3P18847 181 aa17.16■□□□□ 0.34
VPS52-220ENST00000493674 PMFBP1Q8TBY8 1022 aa17.16■□□□□ 0.34
VPS52-220ENST00000493674 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
VPS52-220ENST00000493674 MRS2Q9HD23 443 aa17.15■□□□□ 0.34
VPS52-220ENST00000493674 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
VPS52-220ENST00000493674 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
VPS52-220ENST00000493674 PXDNQ92626 1479 aa17.14■□□□□ 0.33
VPS52-220ENST00000493674 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
VPS52-220ENST00000493674 ABCA3Q99758 1704 aa17.14■□□□□ 0.33
VPS52-220ENST00000493674 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
VPS52-220ENST00000493674 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
VPS52-220ENST00000493674 AHDC1Q5TGY3 1603 aaPredicted RBP17.14■□□□□ 0.33
VPS52-220ENST00000493674 NME9Q86XW9 330 aa17.13■□□□□ 0.33
VPS52-220ENST00000493674 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
VPS52-220ENST00000493674 GGNBP2Q9H3C7 697 aa17.13■□□□□ 0.33
VPS52-220ENST00000493674 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
VPS52-220ENST00000493674 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
VPS52-220ENST00000493674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS52-220ENST00000493674 SLIT3O75094 1523 aa17.11■□□□□ 0.33
VPS52-220ENST00000493674 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
VPS52-220ENST00000493674 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
VPS52-220ENST00000493674 NFAT5O94916 1531 aa17.11■□□□□ 0.33
VPS52-220ENST00000493674 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
VPS52-220ENST00000493674 INSRP06213 1382 aa17.1■□□□□ 0.33
VPS52-220ENST00000493674 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
VPS52-220ENST00000493674 COL16A1Q07092 1604 aaPredicted RBP17.09■□□□□ 0.33
VPS52-220ENST00000493674 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
VPS52-220ENST00000493674 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
VPS52-220ENST00000493674 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
VPS52-220ENST00000493674 SBNO1A3KN83 1393 aa17.07■□□□□ 0.32
VPS52-220ENST00000493674 PNPLA6Q8IY17 1366 aa17.07■□□□□ 0.32
VPS52-220ENST00000493674 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
VPS52-220ENST00000493674 COG3Q96JB2 828 aa17.06■□□□□ 0.32
VPS52-220ENST00000493674 RGPD5Q99666 1765 aa17.06■□□□□ 0.32
VPS52-220ENST00000493674 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
VPS52-220ENST00000493674 TNS3Q68CZ2 1445 aa17.04■□□□□ 0.32
VPS52-220ENST00000493674 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
VPS52-220ENST00000493674 FOXO3O43524 673 aa17.04■□□□□ 0.32
VPS52-220ENST00000493674 COL18A1P39060 1754 aa17.03■□□□□ 0.32
VPS52-220ENST00000493674 MTHFSP49914 203 aa17.03■□□□□ 0.32
VPS52-220ENST00000493674 PSME1Q06323 249 aa17.03■□□□□ 0.32
VPS52-220ENST00000493674 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
VPS52-220ENST00000493674 USP19O94966 1318 aa17.02■□□□□ 0.32
VPS52-220ENST00000493674 HSPA1LP34931 641 aa17.02■□□□□ 0.32
VPS52-220ENST00000493674 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
VPS52-220ENST00000493674 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
VPS52-220ENST00000493674 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
VPS52-220ENST00000493674 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.31
VPS52-220ENST00000493674 SOS2Q07890 1332 aaPredicted RBP17■□□□□ 0.31
VPS52-220ENST00000493674 ABCC6O95255 1503 aa17■□□□□ 0.31
VPS52-220ENST00000493674 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
VPS52-220ENST00000493674 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
VPS52-220ENST00000493674 ABTB2Q8N961 1025 aa16.99■□□□□ 0.31
VPS52-220ENST00000493674 CAMTA1Q9Y6Y1 1673 aa16.99■□□□□ 0.31
VPS52-220ENST00000493674 DLG5Q8TDM6 1919 aa16.99■□□□□ 0.31
VPS52-220ENST00000493674 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
VPS52-220ENST00000493674 NLRP6P59044 892 aa16.98■□□□□ 0.31
VPS52-220ENST00000493674 SPATA31A3Q5VYP0 1347 aa16.97■□□□□ 0.31
VPS52-220ENST00000493674 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
VPS52-220ENST00000493674 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
VPS52-220ENST00000493674 EMILIN1Q9Y6C2 1016 aa16.97■□□□□ 0.31
VPS52-220ENST00000493674 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
VPS52-220ENST00000493674 FBLN1P23142 703 aa16.96■□□□□ 0.31
VPS52-220ENST00000493674 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
VPS52-220ENST00000493674 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
VPS52-220ENST00000493674 RTL1A6NKG5 1358 aa16.96■□□□□ 0.31
VPS52-220ENST00000493674 ARHGEF10O15013 1369 aa16.96■□□□□ 0.31
VPS52-220ENST00000493674 LMO7Q8WWI1 1683 aa16.94■□□□□ 0.3
VPS52-220ENST00000493674 FLT4P35916 1363 aa16.94■□□□□ 0.3
VPS52-220ENST00000493674 JCADQ9P266 1359 aa16.94■□□□□ 0.3
VPS52-220ENST00000493674 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
VPS52-220ENST00000493674 MAP3K19Q56UN5 1328 aa16.94■□□□□ 0.3
VPS52-220ENST00000493674 NUTM2GQ5VZR2 741 aa16.93■□□□□ 0.3
VPS52-220ENST00000493674 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
VPS52-220ENST00000493674 VIRMAQ69YN4 1812 aaKnown RBP16.92■□□□□ 0.3
VPS52-220ENST00000493674 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
VPS52-220ENST00000493674 KCNH5Q8NCM2 988 aa16.91■□□□□ 0.3
VPS52-220ENST00000493674 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms