RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
NUDCD3-210ENST00000493613 QRICH2Q9H0J4 1663 aa14.98□□□□□ -0.01
NUDCD3-210ENST00000493613 FAM83GA6ND36 823 aa14.98□□□□□ -0.01
NUDCD3-210ENST00000493613 SEPT12Q8IYM1 358 aa14.98□□□□□ -0.01
NUDCD3-210ENST00000493613 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
NUDCD3-210ENST00000493613 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
NUDCD3-210ENST00000493613 PAK3O75914 559 aaPredicted RBP14.96□□□□□ -0.01
NUDCD3-210ENST00000493613 BTG4Q9NY30 223 aa14.96□□□□□ -0.01
NUDCD3-210ENST00000493613 ONECUT3O60422 494 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-210ENST00000493613 THSD7AQ9UPZ6 1657 aa14.95□□□□□ -0.02
NUDCD3-210ENST00000493613 A0A0G2JS52 829 aa14.94□□□□□ -0.02
NUDCD3-210ENST00000493613 MYT1Q01538 1121 aa14.94□□□□□ -0.02
NUDCD3-210ENST00000493613 KRT27Q7Z3Y8 459 aa14.94□□□□□ -0.02
NUDCD3-210ENST00000493613 NUDT16Q96DE0 195 aaKnown RBP14.94□□□□□ -0.02
NUDCD3-210ENST00000493613 TNS1Q9HBL0 1735 aaKnown RBP14.94□□□□□ -0.02
NUDCD3-210ENST00000493613 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
NUDCD3-210ENST00000493613 FAM98CQ17RN3 349 aaKnown RBP14.92□□□□□ -0.02
NUDCD3-210ENST00000493613 CDK19Q9BWU1 502 aa14.92□□□□□ -0.02
NUDCD3-210ENST00000493613 NRKQ7Z2Y5 1582 aa14.92□□□□□ -0.02
NUDCD3-210ENST00000493613 DEFB132Q7Z7B7 95 aa14.91□□□□□ -0.02
NUDCD3-210ENST00000493613 PRDM11Q9NQV5 511 aa14.91□□□□□ -0.02
NUDCD3-210ENST00000493613 TRPM1Q7Z4N2 1603 aa14.91□□□□□ -0.02
NUDCD3-210ENST00000493613 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
NUDCD3-210ENST00000493613 LMO7Q8WWI1 1683 aa14.89□□□□□ -0.03
NUDCD3-210ENST00000493613 ACEP12821 1306 aa14.89□□□□□ -0.03
NUDCD3-210ENST00000493613 SPATA31A5Q5VU36 1347 aa14.89□□□□□ -0.03
NUDCD3-210ENST00000493613 SPATA31A7Q8IWB4 1347 aa14.89□□□□□ -0.03
NUDCD3-210ENST00000493613 KIAA0232Q92628 1395 aa14.88□□□□□ -0.03
NUDCD3-210ENST00000493613 NBPF1Q3BBV0 1214 aa14.88□□□□□ -0.03
NUDCD3-210ENST00000493613 LRP5O75197 1615 aa14.88□□□□□ -0.03
NUDCD3-210ENST00000493613 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
NUDCD3-210ENST00000493613 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
NUDCD3-210ENST00000493613 PPIP5K1Q6PFW1 1433 aa14.86□□□□□ -0.03
NUDCD3-210ENST00000493613 CHRNA2Q15822 529 aa14.86□□□□□ -0.03
NUDCD3-210ENST00000493613 NBPF8Q3BBV2 869 aa14.86□□□□□ -0.03
NUDCD3-210ENST00000493613 AKAP12Q02952 1782 aa14.85□□□□□ -0.03
NUDCD3-210ENST00000493613 PLEKHG3A1L390 1219 aa14.85□□□□□ -0.03
NUDCD3-210ENST00000493613 ZC3H6P61129 1189 aaKnown RBP14.85□□□□□ -0.03
NUDCD3-210ENST00000493613 CENPJQ9HC77 1338 aaPredicted RBP14.85□□□□□ -0.03
NUDCD3-210ENST00000493613 CAMTA1Q9Y6Y1 1673 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 BAG6P46379 1132 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 SRPK2P78362 688 aaKnown RBP14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 FAM182BQ5T319 152 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 ABTB2Q8N961 1025 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 STRN4Q9NRL3 753 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 WNK3Q9BYP7 1800 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 SPATA31A1Q5TZJ5 1347 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 PIK3C2AO00443 1686 aa14.84□□□□□ -0.03
NUDCD3-210ENST00000493613 PARP4Q9UKK3 1724 aaKnown RBP14.83□□□□□ -0.03
NUDCD3-210ENST00000493613 RGPD5Q99666 1765 aa14.83□□□□□ -0.03
NUDCD3-210ENST00000493613 RREB1Q92766 1687 aa14.82□□□□□ -0.04
NUDCD3-210ENST00000493613 SSH2Q76I76 1423 aa14.82□□□□□ -0.04
NUDCD3-210ENST00000493613 CABP2Q9NPB3 220 aa14.81□□□□□ -0.04
NUDCD3-210ENST00000493613 CPDO75976 1380 aa14.81□□□□□ -0.04
NUDCD3-210ENST00000493613 EVA1CP58658 441 aa14.8□□□□□ -0.04
NUDCD3-210ENST00000493613 USP35Q9P2H5 1018 aa14.8□□□□□ -0.04
NUDCD3-210ENST00000493613 USP19O94966 1318 aa14.8□□□□□ -0.04
NUDCD3-210ENST00000493613 SBF2Q86WG5 1849 aa14.8□□□□□ -0.04
NUDCD3-210ENST00000493613 DISP2A7MBM2 1401 aa14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 SLIT3O75094 1523 aa14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 USP6P35125 1406 aa14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 COL18A1P39060 1754 aa14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 EN1Q05925 392 aaPredicted RBP14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 NLRP13Q86W25 1043 aa14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 L3MBTL2Q969R5 705 aa14.79□□□□□ -0.04
NUDCD3-210ENST00000493613 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
NUDCD3-210ENST00000493613 COL5A2P05997 1499 aaPredicted RBP14.77□□□□□ -0.04
NUDCD3-210ENST00000493613 PSDA5PKW4 1024 aaPredicted RBP14.77□□□□□ -0.05
NUDCD3-210ENST00000493613 GCP02774 474 aa14.77□□□□□ -0.05
NUDCD3-210ENST00000493613 LRRC37A3O60309 1634 aa14.77□□□□□ -0.05
NUDCD3-210ENST00000493613 LARP1Q6PKG0 1096 aaKnown RBP14.76□□□□□ -0.05
NUDCD3-210ENST00000493613 FAM196AQ6ZSG2 479 aa14.76□□□□□ -0.05
NUDCD3-210ENST00000493613 BARGINQ6ZT62 677 aa14.76□□□□□ -0.05
NUDCD3-210ENST00000493613 CABP1Q9NZU7 370 aa14.76□□□□□ -0.05
NUDCD3-210ENST00000493613 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
NUDCD3-210ENST00000493613 EVC2Q86UK5 1308 aa14.75□□□□□ -0.05
NUDCD3-210ENST00000493613 TRIM37O94972 964 aa14.75□□□□□ -0.05
NUDCD3-210ENST00000493613 SIN3AQ96ST3 1273 aa14.75□□□□□ -0.05
NUDCD3-210ENST00000493613 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
NUDCD3-210ENST00000493613 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
NUDCD3-210ENST00000493613 ROCK2O75116 1388 aaKnown RBP14.74□□□□□ -0.05
NUDCD3-210ENST00000493613 PDE3BQ13370 1112 aa14.74□□□□□ -0.05
NUDCD3-210ENST00000493613 TCP11L2Q8N4U5 519 aa14.74□□□□□ -0.05
NUDCD3-210ENST00000493613 LTN1O94822 1766 aa14.74□□□□□ -0.05
NUDCD3-210ENST00000493613 CRB1P82279 1406 aa14.74□□□□□ -0.05
NUDCD3-210ENST00000493613 ZBTB7CA1YPR0 619 aa14.73□□□□□ -0.05
NUDCD3-210ENST00000493613 NLRP6P59044 892 aa14.73□□□□□ -0.05
NUDCD3-210ENST00000493613 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
NUDCD3-210ENST00000493613 EZH2Q15910 746 aaKnown RBP14.73□□□□□ -0.05
NUDCD3-210ENST00000493613 THRAP3Q9Y2W1 955 aaKnown RBP14.73□□□□□ -0.05
NUDCD3-210ENST00000493613 USP54Q70EL1 1684 aa14.72□□□□□ -0.05
NUDCD3-210ENST00000493613 APBA3O96018 575 aa14.71□□□□□ -0.05
NUDCD3-210ENST00000493613 R3HDM1Q15032 1099 aaKnown RBP14.71□□□□□ -0.05
NUDCD3-210ENST00000493613 AATKQ6ZMQ8 1374 aa14.71□□□□□ -0.06
NUDCD3-210ENST00000493613 PARD3Q8TEW0 1356 aa14.71□□□□□ -0.06
NUDCD3-210ENST00000493613 CAMKK2Q96RR4 588 aa14.7□□□□□ -0.06
NUDCD3-210ENST00000493613 CPSF1Q10570 1443 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-210ENST00000493613 NFAT5O94916 1531 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms