RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 PKP1Q13835 747 aa10.36□□□□□ -0.75
GBP3-208ENST00000493594 PODXL2Q9NZ53 605 aa10.36□□□□□ -0.75
GBP3-208ENST00000493594 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
GBP3-208ENST00000493594 BMP2KLQ5H9B9 411 aa10.36□□□□□ -0.75
GBP3-208ENST00000493594 NOL7Q9UMY1 257 aaKnown RBP10.36□□□□□ -0.75
GBP3-208ENST00000493594 SLC24A1O60721 1099 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 KANK1Q14678 1352 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 SHPRHQ149N8 1683 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
GBP3-208ENST00000493594 MAST1Q9Y2H9 1570 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 PRPF40AO75400 957 aaKnown RBP10.35□□□□□ -0.75
GBP3-208ENST00000493594 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 PRDM10Q9NQV6 1147 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 PREX2Q70Z35 1606 aa10.35□□□□□ -0.75
GBP3-208ENST00000493594 DUOX2Q9NRD8 1548 aa10.34□□□□□ -0.75
GBP3-208ENST00000493594 TMPOP42166 694 aaKnown RBP10.34□□□□□ -0.75
GBP3-208ENST00000493594 TERF1P54274 439 aa10.34□□□□□ -0.75
GBP3-208ENST00000493594 ZNF445P59923 1031 aa10.34□□□□□ -0.75
GBP3-208ENST00000493594 LMBRD1Q9NUN5 540 aa10.34□□□□□ -0.75
GBP3-208ENST00000493594 TRIM35Q9UPQ4 493 aa10.34□□□□□ -0.75
GBP3-208ENST00000493594 TTC37Q6PGP7 1564 aa10.34□□□□□ -0.75
GBP3-208ENST00000493594 ZNF500O60304 480 aaPredicted RBP10.33□□□□□ -0.76
GBP3-208ENST00000493594 CT47B1P0C2W7 299 aaPredicted RBP10.33□□□□□ -0.76
GBP3-208ENST00000493594 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
GBP3-208ENST00000493594 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
GBP3-208ENST00000493594 MAP7D2Q96T17 732 aa10.33□□□□□ -0.76
GBP3-208ENST00000493594 PTPRTO14522 1441 aa10.33□□□□□ -0.76
GBP3-208ENST00000493594 IBTKQ9P2D0 1353 aaPredicted RBP10.33□□□□□ -0.76
GBP3-208ENST00000493594 KIF16BQ96L93 1317 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
GBP3-208ENST00000493594 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 CLEC17AQ6ZS10 378 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 AFAP1Q8N556 730 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 RNF214Q8ND24 703 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
GBP3-208ENST00000493594 ZNF518AQ6AHZ1 1483 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 HS1BP3Q53T59 392 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 ZKSCAN5Q9Y2L8 839 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 SPHKAPQ2M3C7 1700 aa10.32□□□□□ -0.76
GBP3-208ENST00000493594 SYCE3A1L190 88 aa10.31□□□□□ -0.76
GBP3-208ENST00000493594 PLEKHG5O94827 1062 aa10.31□□□□□ -0.76
GBP3-208ENST00000493594 MPNDQ8N594 471 aa10.31□□□□□ -0.76
GBP3-208ENST00000493594 GPT2Q8TD30 523 aa10.31□□□□□ -0.76
GBP3-208ENST00000493594 PDLIM2Q96JY6 352 aa10.31□□□□□ -0.76
GBP3-208ENST00000493594 ZHX1Q9UKY1 873 aaPredicted RBP10.31□□□□□ -0.76
GBP3-208ENST00000493594 A0A0U1RQG5 324 aaPredicted RBP10.31□□□□□ -0.76
GBP3-208ENST00000493594 ZGPATQ8N5A5 531 aaKnown RBP10.31□□□□□ -0.76
GBP3-208ENST00000493594 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
GBP3-208ENST00000493594 CLTCL1P53675 1640 aa10.31□□□□□ -0.76
GBP3-208ENST00000493594 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
GBP3-208ENST00000493594 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
GBP3-208ENST00000493594 NUCB2P80303 420 aa10.3□□□□□ -0.76
GBP3-208ENST00000493594 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
GBP3-208ENST00000493594 ZBTB7BO15156 539 aaPredicted RBP10.3□□□□□ -0.76
GBP3-208ENST00000493594 PLEKHF1Q96S99 279 aa10.3□□□□□ -0.76
GBP3-208ENST00000493594 PPIP5K1Q6PFW1 1433 aa10.3□□□□□ -0.76
GBP3-208ENST00000493594 CD109Q6YHK3 1445 aa10.3□□□□□ -0.76
GBP3-208ENST00000493594 CDC45O75419 566 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 GCC1Q96CN9 775 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 SENP3Q9H4L4 574 aaPredicted RBP10.29□□□□□ -0.76
GBP3-208ENST00000493594 TRPM2O94759 1503 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 DYNC1I1O14576 645 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 KIF3BO15066 747 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 CSPP1Q1MSJ5 1256 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 DNTTIP2Q5QJE6 756 aaKnown RBP10.29□□□□□ -0.76
GBP3-208ENST00000493594 SIRT2Q8IXJ6 389 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 TSC1Q92574 1164 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 TMEM63CQ9P1W3 806 aa10.29□□□□□ -0.76
GBP3-208ENST00000493594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.29□□□□□ -0.76
GBP3-208ENST00000493594 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
GBP3-208ENST00000493594 GSPT1P15170 499 aaKnown RBP10.28□□□□□ -0.76
GBP3-208ENST00000493594 EFCAB2Q5VUJ9 269 aa10.28□□□□□ -0.76
GBP3-208ENST00000493594 GGNBP2Q9H3C7 697 aa10.28□□□□□ -0.76
GBP3-208ENST00000493594 NOS1P29475 1434 aa10.28□□□□□ -0.76
GBP3-208ENST00000493594 TRAPPC8Q9Y2L5 1435 aa10.28□□□□□ -0.76
GBP3-208ENST00000493594 PTMAP06454 111 aaKnown RBP10.28□□□□□ -0.76
GBP3-208ENST00000493594 SAFB2Q14151 953 aaKnown RBP eCLIP10.28□□□□□ -0.76
GBP3-208ENST00000493594 RABEP1Q15276 862 aa10.28□□□□□ -0.76
GBP3-208ENST00000493594 SASS6Q6UVJ0 657 aa10.28□□□□□ -0.76
GBP3-208ENST00000493594 C16orf71Q8IYS4 520 aaPredicted RBP10.28□□□□□ -0.76
GBP3-208ENST00000493594 UGGT1Q9NYU2 1555 aa10.28□□□□□ -0.76
GBP3-208ENST00000493594 CYP2E1P05181 493 aaPredicted RBP10.27□□□□□ -0.76
GBP3-208ENST00000493594 LRSAM1Q6UWE0 723 aa10.27□□□□□ -0.76
GBP3-208ENST00000493594 ZDHHC9Q9Y397 364 aa10.27□□□□□ -0.76
GBP3-208ENST00000493594 SMAP1Q8IYB5 467 aaPredicted RBP10.27□□□□□ -0.77
GBP3-208ENST00000493594 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
GBP3-208ENST00000493594 CCDC39Q9UFE4 941 aa10.27□□□□□ -0.77
GBP3-208ENST00000493594 SHROOM2Q13796 1616 aa10.27□□□□□ -0.77
GBP3-208ENST00000493594 ABCC11Q96J66 1382 aa10.26□□□□□ -0.77
GBP3-208ENST00000493594 APBB1O00213 710 aa10.26□□□□□ -0.77
GBP3-208ENST00000493594 FOXD4L6Q3SYB3 417 aaPredicted RBP10.26□□□□□ -0.77
GBP3-208ENST00000493594 NCBP3Q53F19 620 aaKnown RBP10.26□□□□□ -0.77
GBP3-208ENST00000493594 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
GBP3-208ENST00000493594 FOXD4L3Q6VB84 417 aaPredicted RBP10.26□□□□□ -0.77
GBP3-208ENST00000493594 MTERF4Q7Z6M4 381 aaKnown RBP10.26□□□□□ -0.77
GBP3-208ENST00000493594 ZNF830Q96NB3 372 aaPredicted RBP10.26□□□□□ -0.77
GBP3-208ENST00000493594 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
GBP3-208ENST00000493594 USP26Q9BXU7 913 aa10.26□□□□□ -0.77
GBP3-208ENST00000493594 ATAD2Q6PL18 1390 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms