RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 SCAF11Q99590 1463 aaKnown RBP8.4□□□□□ -1.06
EWSR1-220ENST00000493426 GTF2F1P35269 517 aaKnown RBP eCLIP8.4□□□□□ -1.06
EWSR1-220ENST00000493426 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.4□□□□□ -1.06
EWSR1-220ENST00000493426 CYP2E1P05181 493 aaPredicted RBP8.39□□□□□ -1.07
EWSR1-220ENST00000493426 RLBP1P12271 317 aa8.39□□□□□ -1.07
EWSR1-220ENST00000493426 NUCB2P80303 420 aa8.39□□□□□ -1.07
EWSR1-220ENST00000493426 FGD1P98174 961 aa8.39□□□□□ -1.07
EWSR1-220ENST00000493426 BMP2KLQ5H9B9 411 aa8.39□□□□□ -1.07
EWSR1-220ENST00000493426 RUNDC1Q96C34 613 aa8.39□□□□□ -1.07
EWSR1-220ENST00000493426 KIF2CQ99661 725 aa8.39□□□□□ -1.07
EWSR1-220ENST00000493426 NEURL4Q96JN8 1562 aa8.39□□□□□ -1.07
EWSR1-220ENST00000493426 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 IQGAP1P46940 1657 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 K7ELQ4 463 aaPredicted RBP8.38□□□□□ -1.07
EWSR1-220ENST00000493426 BAG4O95429 457 aaKnown RBP8.38□□□□□ -1.07
EWSR1-220ENST00000493426 ZSCAN20P17040 1043 aaPredicted RBP8.38□□□□□ -1.07
EWSR1-220ENST00000493426 CANXP27824 592 aaKnown RBP8.38□□□□□ -1.07
EWSR1-220ENST00000493426 ZKSCAN2Q63HK3 967 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 PRIMPOLQ96LW4 560 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 CWC22Q9HCG8 908 aaKnown RBP8.38□□□□□ -1.07
EWSR1-220ENST00000493426 CCDC39Q9UFE4 941 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 DDX19BQ9UMR2 479 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 REREQ9P2R6 1566 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 ADGRL1O94910 1474 aa8.38□□□□□ -1.07
EWSR1-220ENST00000493426 PREX2Q70Z35 1606 aa8.37□□□□□ -1.07
EWSR1-220ENST00000493426 UQCRHLA0A096LP55 91 aa8.37□□□□□ -1.07
EWSR1-220ENST00000493426 UQCRHP07919 91 aa8.37□□□□□ -1.07
EWSR1-220ENST00000493426 MFAP1P55081 439 aaKnown RBP8.37□□□□□ -1.07
EWSR1-220ENST00000493426 BRPF1P55201 1214 aaPredicted RBP8.37□□□□□ -1.07
EWSR1-220ENST00000493426 HMGN5P82970 282 aaKnown RBP8.37□□□□□ -1.07
EWSR1-220ENST00000493426 NUCB1Q02818 461 aa8.37□□□□□ -1.07
EWSR1-220ENST00000493426 TAF3Q5VWG9 929 aa8.37□□□□□ -1.07
EWSR1-220ENST00000493426 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
EWSR1-220ENST00000493426 DZIP1LQ8IYY4 767 aaKnown RBP8.37□□□□□ -1.07
EWSR1-220ENST00000493426 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
EWSR1-220ENST00000493426 DUOX2Q9NRD8 1548 aa8.37□□□□□ -1.07
EWSR1-220ENST00000493426 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
EWSR1-220ENST00000493426 SBNO2Q9Y2G9 1366 aa8.36□□□□□ -1.07
EWSR1-220ENST00000493426 ARAP3Q8WWN8 1544 aa8.36□□□□□ -1.07
EWSR1-220ENST00000493426 LETM1O95202 739 aaPredicted RBP8.36□□□□□ -1.07
EWSR1-220ENST00000493426 SPDYE1Q8NFV5 336 aaPredicted RBP8.36□□□□□ -1.07
EWSR1-220ENST00000493426 MYRIPQ8NFW9 859 aa8.36□□□□□ -1.07
EWSR1-220ENST00000493426 DIP2BQ9P265 1576 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 IL16Q14005 1332 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 PLEKHG5O94827 1062 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 TNNT2P45379 298 aaPredicted RBP8.35□□□□□ -1.07
EWSR1-220ENST00000493426 CCDC146Q8IYE0 955 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 PUS7Q96PZ0 661 aaKnown RBP8.35□□□□□ -1.07
EWSR1-220ENST00000493426 CHMP4BQ9H444 224 aaKnown RBP8.35□□□□□ -1.07
EWSR1-220ENST00000493426 ZBTB40Q9NUA8 1239 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 LMBRD1Q9NUN5 540 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 FAM13BQ9NYF5 915 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
EWSR1-220ENST00000493426 DDX49Q9Y6V7 483 aaKnown RBP8.35□□□□□ -1.07
EWSR1-220ENST00000493426 KIAA1210Q9ULL0 1709 aa8.34□□□□□ -1.07
EWSR1-220ENST00000493426 ARID3CA6NKF2 412 aa8.34□□□□□ -1.07
EWSR1-220ENST00000493426 UVSSAQ2YD98 709 aa8.34□□□□□ -1.07
EWSR1-220ENST00000493426 ZSCAN23Q3MJ62 389 aa8.34□□□□□ -1.07
EWSR1-220ENST00000493426 ZNF428Q96B54 188 aa8.34□□□□□ -1.07
EWSR1-220ENST00000493426 RBSNQ9H1K0 784 aa8.34□□□□□ -1.07
EWSR1-220ENST00000493426 TTC37Q6PGP7 1564 aa8.34□□□□□ -1.07
EWSR1-220ENST00000493426 PTPRTO14522 1441 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 NPM1P06748 294 aaKnown RBP eCLIP8.33□□□□□ -1.08
EWSR1-220ENST00000493426 RABEP1Q15276 862 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 LRSAM1Q6UWE0 723 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 TCP11L2Q8N4U5 519 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 SPRYD3Q8NCJ5 442 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 ARXQ96QS3 562 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
EWSR1-220ENST00000493426 CDC42BPBQ9Y5S2 1711 aa8.33□□□□□ -1.08
EWSR1-220ENST00000493426 MADDQ8WXG6 1647 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 GLI2P10070 1586 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 PLCH2O75038 1416 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 SSFA2P28290 1259 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 RGL3Q3MIN7 710 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 ATF7IPQ6VMQ6 1270 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 CARD14Q9BXL6 1004 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 MYOM1P52179 1685 aa8.32□□□□□ -1.08
EWSR1-220ENST00000493426 NOS1P29475 1434 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 IPO8O15397 1037 aaKnown RBP8.31□□□□□ -1.08
EWSR1-220ENST00000493426 MBD3O95983 291 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 FAM193AP78312 1265 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 ALDH1L2Q3SY69 923 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 EFCAB2Q5VUJ9 269 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 CHD1LQ86WJ1 897 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 GAS2L2Q8NHY3 880 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 SPTLC3Q9NUV7 552 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 ABCC11Q96J66 1382 aa8.31□□□□□ -1.08
EWSR1-220ENST00000493426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.3□□□□□ -1.08
EWSR1-220ENST00000493426 MYO5CQ9NQX4 1742 aa8.3□□□□□ -1.08
EWSR1-220ENST00000493426 PRIM1P49642 420 aaKnown RBP8.3□□□□□ -1.08
EWSR1-220ENST00000493426 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
EWSR1-220ENST00000493426 KIAA2012Q0VF49 1180 aa8.3□□□□□ -1.08
EWSR1-220ENST00000493426 SYCP1Q15431 976 aa8.3□□□□□ -1.08
EWSR1-220ENST00000493426 FAM184AQ8NB25 1140 aa8.3□□□□□ -1.08
EWSR1-220ENST00000493426 ARHGAP45Q92619 1136 aa8.3□□□□□ -1.08
EWSR1-220ENST00000493426 FEZ1Q99689 392 aa8.3□□□□□ -1.08
EWSR1-220ENST00000493426 TNNQ9UQP3 1299 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms