RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 CDK19Q9BWU1 502 aa19.28■□□□□ 0.68
SNED1-212ENST00000493358 EP400Q96L91 3159 aa19.27■□□□□ 0.67
SNED1-212ENST00000493358 CENPJQ9HC77 1338 aaPredicted RBP19.26■□□□□ 0.67
SNED1-212ENST00000493358 VPS72Q15906 364 aa19.26■□□□□ 0.67
SNED1-212ENST00000493358 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
SNED1-212ENST00000493358 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
SNED1-212ENST00000493358 A0A0G2JS52 829 aa19.23■□□□□ 0.67
SNED1-212ENST00000493358 SRPK2P78362 688 aaKnown RBP19.23■□□□□ 0.67
SNED1-212ENST00000493358 MYT1Q01538 1121 aa19.23■□□□□ 0.67
SNED1-212ENST00000493358 FAM83GA6ND36 823 aa19.22■□□□□ 0.67
SNED1-212ENST00000493358 CCDC125Q86Z20 511 aa19.22■□□□□ 0.67
SNED1-212ENST00000493358 L3MBTL2Q969R5 705 aa19.22■□□□□ 0.67
SNED1-212ENST00000493358 POLR3AO14802 1390 aaPredicted RBP19.21■□□□□ 0.67
SNED1-212ENST00000493358 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
SNED1-212ENST00000493358 PRDM11Q9NQV5 511 aa19.21■□□□□ 0.67
SNED1-212ENST00000493358 BTG4Q9NY30 223 aa19.21■□□□□ 0.67
SNED1-212ENST00000493358 ACEP12821 1306 aa19.21■□□□□ 0.67
SNED1-212ENST00000493358 PPIP5K1Q6PFW1 1433 aa19.2■□□□□ 0.66
SNED1-212ENST00000493358 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
SNED1-212ENST00000493358 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
SNED1-212ENST00000493358 ROCK2O75116 1388 aaKnown RBP19.19■□□□□ 0.66
SNED1-212ENST00000493358 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
SNED1-212ENST00000493358 SF3B2Q13435 895 aaKnown RBP19.17■□□□□ 0.66
SNED1-212ENST00000493358 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
SNED1-212ENST00000493358 NRKQ7Z2Y5 1582 aa19.17■□□□□ 0.66
SNED1-212ENST00000493358 BLMP54132 1417 aaPredicted RBP19.17■□□□□ 0.66
SNED1-212ENST00000493358 AKAP12Q02952 1782 aa19.15■□□□□ 0.66
SNED1-212ENST00000493358 NUTM2GQ5VZR2 741 aa19.15■□□□□ 0.66
SNED1-212ENST00000493358 KRT27Q7Z3Y8 459 aa19.15■□□□□ 0.66
SNED1-212ENST00000493358 ABTB2Q8N961 1025 aa19.15■□□□□ 0.66
SNED1-212ENST00000493358 CABP2Q9NPB3 220 aa19.15■□□□□ 0.66
SNED1-212ENST00000493358 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
SNED1-212ENST00000493358 KIAA0232Q92628 1395 aa19.15■□□□□ 0.66
SNED1-212ENST00000493358 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.66
SNED1-212ENST00000493358 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
SNED1-212ENST00000493358 BRD4O60885 1362 aaPredicted RBP19.14■□□□□ 0.65
SNED1-212ENST00000493358 THSD7AQ9UPZ6 1657 aa19.12■□□□□ 0.65
SNED1-212ENST00000493358 ONECUT3O60422 494 aaPredicted RBP19.12■□□□□ 0.65
SNED1-212ENST00000493358 ZRANB1Q9UGI0 708 aa19.12■□□□□ 0.65
SNED1-212ENST00000493358 SPATA31A5Q5VU36 1347 aa19.11■□□□□ 0.65
SNED1-212ENST00000493358 SPATA31A7Q8IWB4 1347 aa19.11■□□□□ 0.65
SNED1-212ENST00000493358 ZC3H6P61129 1189 aaKnown RBP19.11■□□□□ 0.65
SNED1-212ENST00000493358 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
SNED1-212ENST00000493358 TONSLQ96HA7 1378 aa19.1■□□□□ 0.65
SNED1-212ENST00000493358 CHRNA2Q15822 529 aa19.1■□□□□ 0.65
SNED1-212ENST00000493358 STRN4Q9NRL3 753 aa19.1■□□□□ 0.65
SNED1-212ENST00000493358 USP6P35125 1406 aa19.09■□□□□ 0.65
SNED1-212ENST00000493358 LMO7Q8WWI1 1683 aa19.09■□□□□ 0.65
SNED1-212ENST00000493358 PIK3C2AO00443 1686 aa19.08■□□□□ 0.65
SNED1-212ENST00000493358 EVA1CP58658 441 aa19.08■□□□□ 0.64
SNED1-212ENST00000493358 USP19O94966 1318 aa19.07■□□□□ 0.64
SNED1-212ENST00000493358 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
SNED1-212ENST00000493358 CPDO75976 1380 aa19.06■□□□□ 0.64
SNED1-212ENST00000493358 MON2Q7Z3U7 1717 aa19.06■□□□□ 0.64
SNED1-212ENST00000493358 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
SNED1-212ENST00000493358 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
SNED1-212ENST00000493358 BAG6P46379 1132 aa19.04■□□□□ 0.64
SNED1-212ENST00000493358 NLRP6P59044 892 aa19.04■□□□□ 0.64
SNED1-212ENST00000493358 TNS1Q9HBL0 1735 aaKnown RBP19.04■□□□□ 0.64
SNED1-212ENST00000493358 CAMTA1Q9Y6Y1 1673 aa19.04■□□□□ 0.64
SNED1-212ENST00000493358 SLIT3O75094 1523 aa19.04■□□□□ 0.64
SNED1-212ENST00000493358 SRCAPQ6ZRS2 3230 aa19.03■□□□□ 0.64
SNED1-212ENST00000493358 CARD11Q9BXL7 1154 aa19.03■□□□□ 0.64
SNED1-212ENST00000493358 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
SNED1-212ENST00000493358 RGPD5Q99666 1765 aa19.03■□□□□ 0.64
SNED1-212ENST00000493358 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
SNED1-212ENST00000493358 GCP02774 474 aa19.02■□□□□ 0.64
SNED1-212ENST00000493358 DEFB132Q7Z7B7 95 aa19.02■□□□□ 0.64
SNED1-212ENST00000493358 SBNO2Q9Y2G9 1366 aa19.02■□□□□ 0.64
SNED1-212ENST00000493358 WNK3Q9BYP7 1800 aa19.02■□□□□ 0.63
SNED1-212ENST00000493358 PARP4Q9UKK3 1724 aaKnown RBP19.01■□□□□ 0.63
SNED1-212ENST00000493358 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
SNED1-212ENST00000493358 TRIM26Q12899 539 aaPredicted RBP19■□□□□ 0.63
SNED1-212ENST00000493358 COL5A2P05997 1499 aaPredicted RBP19■□□□□ 0.63
SNED1-212ENST00000493358 TTC21AQ8NDW8 1320 aa18.99■□□□□ 0.63
SNED1-212ENST00000493358 KTN1Q86UP2 1357 aaKnown RBP18.98■□□□□ 0.63
SNED1-212ENST00000493358 BARGINQ6ZT62 677 aa18.98■□□□□ 0.63
SNED1-212ENST00000493358 COL18A1P39060 1754 aa18.98■□□□□ 0.63
SNED1-212ENST00000493358 LTN1O94822 1766 aa18.97■□□□□ 0.63
SNED1-212ENST00000493358 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
SNED1-212ENST00000493358 LARP1Q6PKG0 1096 aaKnown RBP18.97■□□□□ 0.63
SNED1-212ENST00000493358 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
SNED1-212ENST00000493358 USP54Q70EL1 1684 aa18.96■□□□□ 0.63
SNED1-212ENST00000493358 FAM182BQ5T319 152 aa18.96■□□□□ 0.63
SNED1-212ENST00000493358 FAM196AQ6ZSG2 479 aa18.96■□□□□ 0.63
SNED1-212ENST00000493358 THRAP3Q9Y2W1 955 aaKnown RBP18.96■□□□□ 0.63
SNED1-212ENST00000493358 CRB1P82279 1406 aa18.96■□□□□ 0.63
SNED1-212ENST00000493358 TTC21BQ7Z4L5 1316 aa18.96■□□□□ 0.63
SNED1-212ENST00000493358 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
SNED1-212ENST00000493358 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
SNED1-212ENST00000493358 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
SNED1-212ENST00000493358 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
SNED1-212ENST00000493358 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
SNED1-212ENST00000493358 DISP2A7MBM2 1401 aa18.92■□□□□ 0.62
SNED1-212ENST00000493358 ABCC6O95255 1503 aa18.92■□□□□ 0.62
SNED1-212ENST00000493358 SOX12O15370 315 aa18.92■□□□□ 0.62
SNED1-212ENST00000493358 HDGFL2Q7Z4V5 671 aaPredicted RBP18.92■□□□□ 0.62
SNED1-212ENST00000493358 TMC1Q8TDI8 760 aa18.92■□□□□ 0.62
SNED1-212ENST00000493358 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
SNED1-212ENST00000493358 NFAT5O94916 1531 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms