RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 C8orf37Q96NL8 207 aa12.81□□□□□ -0.36
TM4SF1-203ENST00000493298 EIF3AQ14152 1382 aaKnown RBP12.81□□□□□ -0.36
TM4SF1-203ENST00000493298 SRCAPQ6ZRS2 3230 aa12.81□□□□□ -0.36
TM4SF1-203ENST00000493298 EIF4G2P78344 907 aaKnown RBP eCLIP12.8□□□□□ -0.36
TM4SF1-203ENST00000493298 MEX3CQ5U5Q3 659 aaKnown RBP12.8□□□□□ -0.36
TM4SF1-203ENST00000493298 NUDT16Q96DE0 195 aaKnown RBP12.8□□□□□ -0.36
TM4SF1-203ENST00000493298 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
TM4SF1-203ENST00000493298 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
TM4SF1-203ENST00000493298 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
TM4SF1-203ENST00000493298 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
TM4SF1-203ENST00000493298 LMO7Q8WWI1 1683 aa12.79□□□□□ -0.36
TM4SF1-203ENST00000493298 MON2Q7Z3U7 1717 aa12.79□□□□□ -0.36
TM4SF1-203ENST00000493298 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
TM4SF1-203ENST00000493298 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
TM4SF1-203ENST00000493298 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
TM4SF1-203ENST00000493298 CENPJQ9HC77 1338 aaPredicted RBP12.78□□□□□ -0.36
TM4SF1-203ENST00000493298 ARHGEF10O15013 1369 aa12.78□□□□□ -0.36
TM4SF1-203ENST00000493298 USP54Q70EL1 1684 aa12.77□□□□□ -0.36
TM4SF1-203ENST00000493298 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
TM4SF1-203ENST00000493298 COL18A1P39060 1754 aa12.76□□□□□ -0.37
TM4SF1-203ENST00000493298 RXRBP28702 533 aa12.76□□□□□ -0.37
TM4SF1-203ENST00000493298 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
TM4SF1-203ENST00000493298 SBNO2Q9Y2G9 1366 aa12.76□□□□□ -0.37
TM4SF1-203ENST00000493298 ACEP12821 1306 aa12.75□□□□□ -0.37
TM4SF1-203ENST00000493298 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
TM4SF1-203ENST00000493298 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
TM4SF1-203ENST00000493298 CCDC7Q96M83 1385 aa12.75□□□□□ -0.37
TM4SF1-203ENST00000493298 CD163L1Q9NR16 1453 aa12.75□□□□□ -0.37
TM4SF1-203ENST00000493298 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
TM4SF1-203ENST00000493298 PSME1Q06323 249 aa12.74□□□□□ -0.37
TM4SF1-203ENST00000493298 USP21Q9UK80 565 aa12.74□□□□□ -0.37
TM4SF1-203ENST00000493298 CCDC61Q9Y6R9 512 aa12.74□□□□□ -0.37
TM4SF1-203ENST00000493298 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
TM4SF1-203ENST00000493298 SLIT3O75094 1523 aa12.73□□□□□ -0.37
TM4SF1-203ENST00000493298 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
TM4SF1-203ENST00000493298 RGPD5Q99666 1765 aa12.73□□□□□ -0.37
TM4SF1-203ENST00000493298 USP6P35125 1406 aa12.72□□□□□ -0.37
TM4SF1-203ENST00000493298 CPSF1Q10570 1443 aaKnown RBP12.72□□□□□ -0.37
TM4SF1-203ENST00000493298 USP19O94966 1318 aa12.72□□□□□ -0.37
TM4SF1-203ENST00000493298 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
TM4SF1-203ENST00000493298 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
TM4SF1-203ENST00000493298 UNC5CLQ8IV45 518 aa12.71□□□□□ -0.37
TM4SF1-203ENST00000493298 TRPC5Q9UL62 973 aaPredicted RBP12.71□□□□□ -0.37
TM4SF1-203ENST00000493298 CAMTA1Q9Y6Y1 1673 aa12.7□□□□□ -0.38
TM4SF1-203ENST00000493298 NGDNQ8NEJ9 315 aaKnown RBP12.7□□□□□ -0.38
TM4SF1-203ENST00000493298 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
TM4SF1-203ENST00000493298 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
TM4SF1-203ENST00000493298 WNK3Q9BYP7 1800 aa12.69□□□□□ -0.38
TM4SF1-203ENST00000493298 MYOM1P52179 1685 aa12.68□□□□□ -0.38
TM4SF1-203ENST00000493298 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
TM4SF1-203ENST00000493298 NFAT5O94916 1531 aa12.67□□□□□ -0.38
TM4SF1-203ENST00000493298 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
TM4SF1-203ENST00000493298 VPS72Q15906 364 aa12.67□□□□□ -0.38
TM4SF1-203ENST00000493298 CABP1Q9NZU7 370 aa12.67□□□□□ -0.38
TM4SF1-203ENST00000493298 CPDO75976 1380 aa12.67□□□□□ -0.38
TM4SF1-203ENST00000493298 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
TM4SF1-203ENST00000493298 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
TM4SF1-203ENST00000493298 LTN1O94822 1766 aa12.66□□□□□ -0.38
TM4SF1-203ENST00000493298 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
TM4SF1-203ENST00000493298 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
TM4SF1-203ENST00000493298 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
TM4SF1-203ENST00000493298 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
TM4SF1-203ENST00000493298 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
TM4SF1-203ENST00000493298 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
TM4SF1-203ENST00000493298 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
TM4SF1-203ENST00000493298 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
TM4SF1-203ENST00000493298 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
TM4SF1-203ENST00000493298 ATAD2Q6PL18 1390 aa12.63□□□□□ -0.39
TM4SF1-203ENST00000493298 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
TM4SF1-203ENST00000493298 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
TM4SF1-203ENST00000493298 COL5A2P05997 1499 aaPredicted RBP12.62□□□□□ -0.39
TM4SF1-203ENST00000493298 SBF2Q86WG5 1849 aa12.62□□□□□ -0.39
TM4SF1-203ENST00000493298 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
TM4SF1-203ENST00000493298 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
TM4SF1-203ENST00000493298 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
TM4SF1-203ENST00000493298 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
TM4SF1-203ENST00000493298 GCP02774 474 aa12.6□□□□□ -0.39
TM4SF1-203ENST00000493298 TMF1P82094 1093 aa12.6□□□□□ -0.39
TM4SF1-203ENST00000493298 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
TM4SF1-203ENST00000493298 ABTB2Q8N961 1025 aa12.6□□□□□ -0.39
TM4SF1-203ENST00000493298 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
TM4SF1-203ENST00000493298 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
TM4SF1-203ENST00000493298 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
TM4SF1-203ENST00000493298 A0A1W2PP64 1363 aa12.59□□□□□ -0.39
TM4SF1-203ENST00000493298 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
TM4SF1-203ENST00000493298 ABCC6O95255 1503 aa12.59□□□□□ -0.39
TM4SF1-203ENST00000493298 ZC3H6P61129 1189 aaKnown RBP12.59□□□□□ -0.39
TM4SF1-203ENST00000493298 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
TM4SF1-203ENST00000493298 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
TM4SF1-203ENST00000493298 OVOS2A0A0J9YW53 1432 aa12.58□□□□□ -0.4
TM4SF1-203ENST00000493298 RGPD1P0DJD0 1748 aa12.58□□□□□ -0.4
TM4SF1-203ENST00000493298 OVOS2Q6IE36 1432 aa12.58□□□□□ -0.4
TM4SF1-203ENST00000493298 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
TM4SF1-203ENST00000493298 AATKQ6ZMQ8 1374 aa12.57□□□□□ -0.4
TM4SF1-203ENST00000493298 RGPD2P0DJD1 1756 aa12.57□□□□□ -0.4
TM4SF1-203ENST00000493298 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
TM4SF1-203ENST00000493298 MIER1Q8N108 512 aa12.57□□□□□ -0.4
TM4SF1-203ENST00000493298 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
TM4SF1-203ENST00000493298 KIF20BQ96Q89 1820 aa12.57□□□□□ -0.4
TM4SF1-203ENST00000493298 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms