RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 GLI3P10071 1580 aa29.53■■■□□ 2.32
CLTA-208ENST00000493185 SRPK2P78362 688 aaKnown RBP29.52■■■□□ 2.32
CLTA-208ENST00000493185 POLR3AO14802 1390 aaPredicted RBP29.52■■■□□ 2.32
CLTA-208ENST00000493185 FAM83GA6ND36 823 aa29.51■■■□□ 2.31
CLTA-208ENST00000493185 VPS72Q15906 364 aa29.51■■■□□ 2.31
CLTA-208ENST00000493185 ACEP12821 1306 aa29.5■■■□□ 2.31
CLTA-208ENST00000493185 CCDC9Q9Y3X0 531 aaKnown RBP29.5■■■□□ 2.31
CLTA-208ENST00000493185 CRYBG1Q9Y4K1 1723 aa29.5■■■□□ 2.31
CLTA-208ENST00000493185 PLEKHG3A1L390 1219 aa29.49■■■□□ 2.31
CLTA-208ENST00000493185 COL14A1Q05707 1796 aaKnown RBP29.49■■■□□ 2.31
CLTA-208ENST00000493185 NBPF8Q3BBV2 869 aa29.48■■■□□ 2.31
CLTA-208ENST00000493185 ROCK2O75116 1388 aaKnown RBP29.48■■■□□ 2.31
CLTA-208ENST00000493185 NRAPQ86VF7 1730 aa29.45■■■□□ 2.31
CLTA-208ENST00000493185 CABP2Q9NPB3 220 aa29.45■■■□□ 2.31
CLTA-208ENST00000493185 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.3
CLTA-208ENST00000493185 BTG4Q9NY30 223 aa29.44■■■□□ 2.3
CLTA-208ENST00000493185 PRDM11Q9NQV5 511 aa29.42■■■□□ 2.3
CLTA-208ENST00000493185 PHRF1Q9P1Y6 1649 aaKnown RBP29.42■■■□□ 2.3
CLTA-208ENST00000493185 EP400Q96L91 3159 aa29.41■■■□□ 2.3
CLTA-208ENST00000493185 BRWD3Q6RI45 1802 aa29.41■■■□□ 2.3
CLTA-208ENST00000493185 NUTM2GQ5VZR2 741 aa29.4■■■□□ 2.3
CLTA-208ENST00000493185 SEPT12Q8IYM1 358 aa29.4■■■□□ 2.3
CLTA-208ENST00000493185 EVC2Q86UK5 1308 aa29.4■■■□□ 2.3
CLTA-208ENST00000493185 TRIM26Q12899 539 aaPredicted RBP29.39■■■□□ 2.3
CLTA-208ENST00000493185 ABTB2Q8N961 1025 aa29.38■■■□□ 2.29
CLTA-208ENST00000493185 CCDC125Q86Z20 511 aa29.37■■■□□ 2.29
CLTA-208ENST00000493185 KIAA0232Q92628 1395 aa29.37■■■□□ 2.29
CLTA-208ENST00000493185 ONECUT3O60422 494 aaPredicted RBP29.36■■■□□ 2.29
CLTA-208ENST00000493185 TONSLQ96HA7 1378 aa29.36■■■□□ 2.29
CLTA-208ENST00000493185 BRD4O60885 1362 aaPredicted RBP29.35■■■□□ 2.29
CLTA-208ENST00000493185 A0A0G2JS52 829 aa29.34■■■□□ 2.29
CLTA-208ENST00000493185 MYT1Q01538 1121 aa29.34■■■□□ 2.29
CLTA-208ENST00000493185 CABP1Q9NZU7 370 aa29.34■■■□□ 2.29
CLTA-208ENST00000493185 ZC3H6P61129 1189 aaKnown RBP29.33■■■□□ 2.29
CLTA-208ENST00000493185 CHRNA2Q15822 529 aa29.32■■■□□ 2.28
CLTA-208ENST00000493185 FAM98CQ17RN3 349 aaKnown RBP29.31■■■□□ 2.28
CLTA-208ENST00000493185 NLRP13Q86W25 1043 aa29.31■■■□□ 2.28
CLTA-208ENST00000493185 NRKQ7Z2Y5 1582 aa29.3■■■□□ 2.28
CLTA-208ENST00000493185 KRT27Q7Z3Y8 459 aa29.3■■■□□ 2.28
CLTA-208ENST00000493185 USP6P35125 1406 aa29.29■■■□□ 2.28
CLTA-208ENST00000493185 USP19O94966 1318 aa29.29■■■□□ 2.28
CLTA-208ENST00000493185 SPATA31A5Q5VU36 1347 aa29.29■■■□□ 2.28
CLTA-208ENST00000493185 SPATA31A7Q8IWB4 1347 aa29.29■■■□□ 2.28
CLTA-208ENST00000493185 BLMP54132 1417 aaPredicted RBP29.28■■■□□ 2.28
CLTA-208ENST00000493185 CARD11Q9BXL7 1154 aa29.27■■■□□ 2.28
CLTA-208ENST00000493185 STRN4Q9NRL3 753 aa29.25■■■□□ 2.27
CLTA-208ENST00000493185 CPDO75976 1380 aa29.25■■■□□ 2.27
CLTA-208ENST00000493185 GCP02774 474 aa29.23■■■□□ 2.27
CLTA-208ENST00000493185 SF3B2Q13435 895 aaKnown RBP29.23■■■□□ 2.27
CLTA-208ENST00000493185 SBNO2Q9Y2G9 1366 aa29.23■■■□□ 2.27
CLTA-208ENST00000493185 EVA1CP58658 441 aa29.22■■■□□ 2.27
CLTA-208ENST00000493185 SPATA31A1Q5TZJ5 1347 aa29.21■■■□□ 2.27
CLTA-208ENST00000493185 NLRP6P59044 892 aa29.21■■■□□ 2.27
CLTA-208ENST00000493185 ZNF692Q9BU19 519 aaPredicted RBP29.21■■■□□ 2.27
CLTA-208ENST00000493185 AKAP12Q02952 1782 aa29.21■■■□□ 2.27
CLTA-208ENST00000493185 THSD7AQ9UPZ6 1657 aa29.2■■■□□ 2.26
CLTA-208ENST00000493185 SSH2Q76I76 1423 aa29.2■■■□□ 2.26
CLTA-208ENST00000493185 PIK3C2AO00443 1686 aa29.18■■■□□ 2.26
CLTA-208ENST00000493185 LMO7Q8WWI1 1683 aa29.18■■■□□ 2.26
CLTA-208ENST00000493185 CAMTA1Q9Y6Y1 1673 aa29.18■■■□□ 2.26
CLTA-208ENST00000493185 SLIT3O75094 1523 aa29.16■■■□□ 2.26
CLTA-208ENST00000493185 ZRANB1Q9UGI0 708 aa29.16■■■□□ 2.26
CLTA-208ENST00000493185 USP35Q9P2H5 1018 aa29.14■■■□□ 2.26
CLTA-208ENST00000493185 TTC21BQ7Z4L5 1316 aa29.14■■■□□ 2.25
CLTA-208ENST00000493185 CPSF1Q10570 1443 aaKnown RBP29.13■■■□□ 2.25
CLTA-208ENST00000493185 TTC21AQ8NDW8 1320 aa29.13■■■□□ 2.25
CLTA-208ENST00000493185 KTN1Q86UP2 1357 aaKnown RBP29.13■■■□□ 2.25
CLTA-208ENST00000493185 ZBTB7CA1YPR0 619 aa29.12■■■□□ 2.25
CLTA-208ENST00000493185 LARP1Q6PKG0 1096 aaKnown RBP29.12■■■□□ 2.25
CLTA-208ENST00000493185 DEFB132Q7Z7B7 95 aa29.12■■■□□ 2.25
CLTA-208ENST00000493185 BARGINQ6ZT62 677 aa29.1■■■□□ 2.25
CLTA-208ENST00000493185 MON2Q7Z3U7 1717 aa29.1■■■□□ 2.25
CLTA-208ENST00000493185 COL5A2P05997 1499 aaPredicted RBP29.1■■■□□ 2.25
CLTA-208ENST00000493185 AATKQ6ZMQ8 1374 aa29.09■■■□□ 2.25
CLTA-208ENST00000493185 FAM182BQ5T319 152 aa29.08■■■□□ 2.25
CLTA-208ENST00000493185 TCP11L2Q8N4U5 519 aa29.08■■■□□ 2.25
CLTA-208ENST00000493185 RGPD1P0DJD0 1748 aa29.08■■■□□ 2.25
CLTA-208ENST00000493185 BAG6P46379 1132 aa29.07■■■□□ 2.24
CLTA-208ENST00000493185 KCNH5Q8NCM2 988 aa29.07■■■□□ 2.24
CLTA-208ENST00000493185 TMC1Q8TDI8 760 aa29.07■■■□□ 2.24
CLTA-208ENST00000493185 THRAP3Q9Y2W1 955 aaKnown RBP29.06■■■□□ 2.24
CLTA-208ENST00000493185 CRB1P82279 1406 aa29.03■■■□□ 2.24
CLTA-208ENST00000493185 HDGFL2Q7Z4V5 671 aaPredicted RBP29.03■■■□□ 2.24
CLTA-208ENST00000493185 COL18A1P39060 1754 aa29.03■■■□□ 2.24
CLTA-208ENST00000493185 SOX12O15370 315 aa29.02■■■□□ 2.24
CLTA-208ENST00000493185 PDE3BQ13370 1112 aa29.02■■■□□ 2.24
CLTA-208ENST00000493185 FAM196AQ6ZSG2 479 aa29.02■■■□□ 2.24
CLTA-208ENST00000493185 PUS7Q96PZ0 661 aaKnown RBP29.02■■■□□ 2.24
CLTA-208ENST00000493185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.01■■■□□ 2.23
CLTA-208ENST00000493185 CD163L1Q9NR16 1453 aa29■■■□□ 2.23
CLTA-208ENST00000493185 ARHGEF25Q86VW2 580 aa29■■■□□ 2.23
CLTA-208ENST00000493185 SLC12A5Q9H2X9 1139 aa29■■■□□ 2.23
CLTA-208ENST00000493185 ST20-MTHFSA0A0A6YYL1 179 aa28.99■■■□□ 2.23
CLTA-208ENST00000493185 SLC24A1O60721 1099 aa28.99■■■□□ 2.23
CLTA-208ENST00000493185 TERF2IPQ9NYB0 399 aa28.99■■■□□ 2.23
CLTA-208ENST00000493185 TNS1Q9HBL0 1735 aaKnown RBP28.97■■■□□ 2.23
CLTA-208ENST00000493185 PARP4Q9UKK3 1724 aaKnown RBP28.97■■■□□ 2.23
CLTA-208ENST00000493185 TOM1L2Q6ZVM7 507 aa28.97■■■□□ 2.23
CLTA-208ENST00000493185 TESK2Q96S53 571 aa28.97■■■□□ 2.23
CLTA-208ENST00000493185 NFAT5O94916 1531 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms