RNA–Protein interactions for RNA: ENST00000492959.1

GTF2E1-204, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 4

Gene GTF2E1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-204ENST00000492959 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
GTF2E1-204ENST00000492959 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
GTF2E1-204ENST00000492959 NGDNQ8NEJ9 315 aaKnown RBP16.62■□□□□ 0.25
GTF2E1-204ENST00000492959 PRR36Q9H6K5 1346 aa16.62■□□□□ 0.25
GTF2E1-204ENST00000492959 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
GTF2E1-204ENST00000492959 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
GTF2E1-204ENST00000492959 HRCP23327 699 aa16.6■□□□□ 0.25
GTF2E1-204ENST00000492959 DEFB132Q7Z7B7 95 aa16.6■□□□□ 0.25
GTF2E1-204ENST00000492959 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
GTF2E1-204ENST00000492959 PAK3O75914 559 aaPredicted RBP16.59■□□□□ 0.25
GTF2E1-204ENST00000492959 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.24
GTF2E1-204ENST00000492959 ARHGEF28Q8N1W1 1705 aaKnown RBP16.57■□□□□ 0.24
GTF2E1-204ENST00000492959 BAG6P46379 1132 aa16.57■□□□□ 0.24
GTF2E1-204ENST00000492959 PRDM11Q9NQV5 511 aa16.57■□□□□ 0.24
GTF2E1-204ENST00000492959 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
GTF2E1-204ENST00000492959 ATP7BP35670 1465 aa16.55■□□□□ 0.24
GTF2E1-204ENST00000492959 SPATA31A5Q5VU36 1347 aa16.55■□□□□ 0.24
GTF2E1-204ENST00000492959 SPATA31A7Q8IWB4 1347 aa16.55■□□□□ 0.24
GTF2E1-204ENST00000492959 NUDT16Q96DE0 195 aaKnown RBP16.55■□□□□ 0.24
GTF2E1-204ENST00000492959 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
GTF2E1-204ENST00000492959 CDK19Q9BWU1 502 aa16.52■□□□□ 0.24
GTF2E1-204ENST00000492959 RGPD1P0DJD0 1748 aa16.52■□□□□ 0.24
GTF2E1-204ENST00000492959 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
GTF2E1-204ENST00000492959 KIAA1210Q9ULL0 1709 aa16.51■□□□□ 0.23
GTF2E1-204ENST00000492959 CCDC61Q9Y6R9 512 aa16.51■□□□□ 0.23
GTF2E1-204ENST00000492959 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
GTF2E1-204ENST00000492959 PHRF1Q9P1Y6 1649 aaKnown RBP16.5■□□□□ 0.23
GTF2E1-204ENST00000492959 POLR3AO14802 1390 aaPredicted RBP16.5■□□□□ 0.23
GTF2E1-204ENST00000492959 LRP5O75197 1615 aa16.49■□□□□ 0.23
GTF2E1-204ENST00000492959 TOPAZ1Q8N9V7 1692 aa16.49■□□□□ 0.23
GTF2E1-204ENST00000492959 ACEP12821 1306 aa16.48■□□□□ 0.23
GTF2E1-204ENST00000492959 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
GTF2E1-204ENST00000492959 NBPF8Q3BBV2 869 aa16.48■□□□□ 0.23
GTF2E1-204ENST00000492959 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
GTF2E1-204ENST00000492959 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
GTF2E1-204ENST00000492959 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
GTF2E1-204ENST00000492959 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
GTF2E1-204ENST00000492959 DISP2A7MBM2 1401 aa16.46■□□□□ 0.23
GTF2E1-204ENST00000492959 EVA1CP58658 441 aa16.46■□□□□ 0.23
GTF2E1-204ENST00000492959 EN1Q05925 392 aaPredicted RBP16.46■□□□□ 0.23
GTF2E1-204ENST00000492959 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
GTF2E1-204ENST00000492959 FAM182BQ5T319 152 aa16.46■□□□□ 0.23
GTF2E1-204ENST00000492959 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
GTF2E1-204ENST00000492959 PSDA5PKW4 1024 aaPredicted RBP16.45■□□□□ 0.22
GTF2E1-204ENST00000492959 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
GTF2E1-204ENST00000492959 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
GTF2E1-204ENST00000492959 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
GTF2E1-204ENST00000492959 NRKQ7Z2Y5 1582 aa16.43■□□□□ 0.22
GTF2E1-204ENST00000492959 CPDO75976 1380 aa16.43■□□□□ 0.22
GTF2E1-204ENST00000492959 SRPK2P78362 688 aaKnown RBP16.43■□□□□ 0.22
GTF2E1-204ENST00000492959 BARGINQ6ZT62 677 aa16.43■□□□□ 0.22
GTF2E1-204ENST00000492959 SSH2Q76I76 1423 aa16.43■□□□□ 0.22
GTF2E1-204ENST00000492959 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
GTF2E1-204ENST00000492959 BRD4O60885 1362 aaPredicted RBP16.42■□□□□ 0.22
GTF2E1-204ENST00000492959 NBPF1Q3BBV0 1214 aa16.42■□□□□ 0.22
GTF2E1-204ENST00000492959 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
GTF2E1-204ENST00000492959 USP35Q9P2H5 1018 aa16.42■□□□□ 0.22
GTF2E1-204ENST00000492959 USP19O94966 1318 aa16.42■□□□□ 0.22
GTF2E1-204ENST00000492959 PARD3Q8TEW0 1356 aa16.41■□□□□ 0.22
GTF2E1-204ENST00000492959 TRIM37O94972 964 aa16.41■□□□□ 0.22
GTF2E1-204ENST00000492959 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
GTF2E1-204ENST00000492959 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
GTF2E1-204ENST00000492959 KCNA4P22459 653 aa16.4■□□□□ 0.22
GTF2E1-204ENST00000492959 TCP11L2Q8N4U5 519 aa16.4■□□□□ 0.22
GTF2E1-204ENST00000492959 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
GTF2E1-204ENST00000492959 R3HDM1Q15032 1099 aaKnown RBP16.39■□□□□ 0.21
GTF2E1-204ENST00000492959 EZH2Q15910 746 aaKnown RBP16.39■□□□□ 0.21
GTF2E1-204ENST00000492959 THRAP3Q9Y2W1 955 aaKnown RBP16.39■□□□□ 0.21
GTF2E1-204ENST00000492959 LMO7Q8WWI1 1683 aa16.39■□□□□ 0.21
GTF2E1-204ENST00000492959 APBA3O96018 575 aa16.38■□□□□ 0.21
GTF2E1-204ENST00000492959 GCP02774 474 aa16.38■□□□□ 0.21
GTF2E1-204ENST00000492959 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
GTF2E1-204ENST00000492959 CAMKK2Q96RR4 588 aa16.38■□□□□ 0.21
GTF2E1-204ENST00000492959 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
GTF2E1-204ENST00000492959 QRICH2Q9H0J4 1663 aa16.37■□□□□ 0.21
GTF2E1-204ENST00000492959 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
GTF2E1-204ENST00000492959 C11orf95C9JLR9 678 aaPredicted RBP16.36■□□□□ 0.21
GTF2E1-204ENST00000492959 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
GTF2E1-204ENST00000492959 USP6P35125 1406 aa16.35■□□□□ 0.21
GTF2E1-204ENST00000492959 NLRP6P59044 892 aa16.34■□□□□ 0.21
GTF2E1-204ENST00000492959 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
GTF2E1-204ENST00000492959 CRB1P82279 1406 aa16.34■□□□□ 0.21
GTF2E1-204ENST00000492959 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
GTF2E1-204ENST00000492959 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.2
GTF2E1-204ENST00000492959 NBPF14Q5TI25 921 aa16.32■□□□□ 0.2
GTF2E1-204ENST00000492959 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
GTF2E1-204ENST00000492959 RREB1Q92766 1687 aa16.31■□□□□ 0.2
GTF2E1-204ENST00000492959 SLIT3O75094 1523 aa16.31■□□□□ 0.2
GTF2E1-204ENST00000492959 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
GTF2E1-204ENST00000492959 L3MBTL2Q969R5 705 aa16.31■□□□□ 0.2
GTF2E1-204ENST00000492959 OVOS2A0A0G2JMS6 1433 aa16.29■□□□□ 0.2
GTF2E1-204ENST00000492959 OVOS2A0A0J9YW53 1432 aa16.29■□□□□ 0.2
GTF2E1-204ENST00000492959 OVOS2Q6IE36 1432 aa16.29■□□□□ 0.2
GTF2E1-204ENST00000492959 NUP188Q5SRE5 1749 aa16.29■□□□□ 0.2
GTF2E1-204ENST00000492959 TRPM1Q7Z4N2 1603 aa16.28■□□□□ 0.2
GTF2E1-204ENST00000492959 TOM1L2Q6ZVM7 507 aa16.28■□□□□ 0.2
GTF2E1-204ENST00000492959 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
GTF2E1-204ENST00000492959 PIK3C2AO00443 1686 aa16.27■□□□□ 0.2
GTF2E1-204ENST00000492959 DDB1Q16531 1140 aa16.27■□□□□ 0.2
GTF2E1-204ENST00000492959 KCNH5Q8NCM2 988 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms