RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	GPAT2	Q6NUI2	795 aa		7.96	□□□□□ -1.14
GCFC2-210	ENST00000492826	P3H3	Q8IVL6	736 aa		7.96	□□□□□ -1.14
GCFC2-210	ENST00000492826	UNC93B1	Q9H1C4	597 aa		7.96	□□□□□ -1.14
GCFC2-210	ENST00000492826	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.96	□□□□□ -1.14
GCFC2-210	ENST00000492826	ZNF385C	Q66K41	422 aa	Predicted RBP	7.95	□□□□□ -1.14
GCFC2-210	ENST00000492826	CNTNAP3B	Q96NU0	1288 aa		7.95	□□□□□ -1.14
GCFC2-210	ENST00000492826	CNTNAP3	Q9BZ76	1288 aa		7.95	□□□□□ -1.14
GCFC2-210	ENST00000492826	ZFAND3	Q9H8U3	227 aa		7.95	□□□□□ -1.14
GCFC2-210	ENST00000492826	EVA1B	Q9NVM1	165 aa		7.95	□□□□□ -1.14
GCFC2-210	ENST00000492826	IGHA1	P01876	353 aa		7.94	□□□□□ -1.14
GCFC2-210	ENST00000492826	ZNF511	Q8NB15	262 aa		7.94	□□□□□ -1.14
GCFC2-210	ENST00000492826	MS4A1	P11836	297 aa		7.93	□□□□□ -1.14
GCFC2-210	ENST00000492826	C6orf118	Q5T5N4	469 aa		7.93	□□□□□ -1.14
GCFC2-210	ENST00000492826	KRTAP4-8	Q9BYQ9	185 aa		7.93	□□□□□ -1.14
GCFC2-210	ENST00000492826	PCDHGC3	Q9UN70	934 aa		7.93	□□□□□ -1.14
GCFC2-210	ENST00000492826	ITPKC	Q96DU7	683 aa		7.92	□□□□□ -1.14
GCFC2-210	ENST00000492826	DNMT3L	Q9UJW3	386 aa		7.92	□□□□□ -1.14
GCFC2-210	ENST00000492826	ARHGEF15	O94989	841 aa		7.91	□□□□□ -1.14
GCFC2-210	ENST00000492826	ZIC2	O95409	532 aa	Predicted RBP	7.91	□□□□□ -1.14
GCFC2-210	ENST00000492826	IRS1	P35568	1242 aa		7.91	□□□□□ -1.14
GCFC2-210	ENST00000492826	PTPRN	Q16849	979 aa		7.91	□□□□□ -1.14
GCFC2-210	ENST00000492826	SMYD5	Q6GMV2	418 aa		7.91	□□□□□ -1.14
GCFC2-210	ENST00000492826	WHAMM	Q8TF30	809 aa		7.91	□□□□□ -1.14
GCFC2-210	ENST00000492826	CDK15	Q96Q40	435 aa		7.91	□□□□□ -1.14
GCFC2-210	ENST00000492826	SOS2	Q07890	1332 aa	Predicted RBP	7.9	□□□□□ -1.14
GCFC2-210	ENST00000492826	NR3C2	P08235	984 aa		7.9	□□□□□ -1.14
GCFC2-210	ENST00000492826	MDM2	Q00987	491 aa	Predicted RBP	7.9	□□□□□ -1.14
GCFC2-210	ENST00000492826	KCNH2	Q12809	1159 aa		7.9	□□□□□ -1.14
GCFC2-210	ENST00000492826	RNFT1	Q5M7Z0	435 aa		7.9	□□□□□ -1.14
GCFC2-210	ENST00000492826	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.89	□□□□□ -1.15
GCFC2-210	ENST00000492826	SLURP2	P0DP57	97 aa		7.87	□□□□□ -1.15
GCFC2-210	ENST00000492826	FOXK2	Q01167	660 aa		7.87	□□□□□ -1.15
GCFC2-210	ENST00000492826	LINC00528	Q8N1L1	170 aa		7.87	□□□□□ -1.15
GCFC2-210	ENST00000492826	MEIOB	Q8N635	442 aa		7.87	□□□□□ -1.15
GCFC2-210	ENST00000492826	FDX1	P10109	184 aa		7.86	□□□□□ -1.15
GCFC2-210	ENST00000492826	BMP2	P12643	396 aa		7.86	□□□□□ -1.15
GCFC2-210	ENST00000492826	SVOP	Q8N4V2	548 aa		7.86	□□□□□ -1.15
GCFC2-210	ENST00000492826	NANOS1	Q8WY41	292 aa	Known RBP	7.86	□□□□□ -1.15
GCFC2-210	ENST00000492826	C6orf229	H3BNL8	230 aa		7.85	□□□□□ -1.15
GCFC2-210	ENST00000492826	GRM5	P41594	1212 aa		7.85	□□□□□ -1.15
GCFC2-210	ENST00000492826	MAP2K5	Q13163	448 aa		7.85	□□□□□ -1.15
GCFC2-210	ENST00000492826	GPIHBP1	Q8IV16	184 aa		7.85	□□□□□ -1.15
GCFC2-210	ENST00000492826	FAM174A	Q8TBP5	190 aa		7.85	□□□□□ -1.15
GCFC2-210	ENST00000492826	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.85	□□□□□ -1.15
GCFC2-210	ENST00000492826	IRF6	O14896	467 aa		7.84	□□□□□ -1.15
GCFC2-210	ENST00000492826	ADAM23	O75077	832 aa		7.84	□□□□□ -1.15
GCFC2-210	ENST00000492826	KANK3	Q6NY19	840 aa		7.84	□□□□□ -1.15
GCFC2-210	ENST00000492826	FOXJ1	Q92949	421 aa		7.84	□□□□□ -1.15
GCFC2-210	ENST00000492826	PTS	Q03393	145 aa		7.83	□□□□□ -1.16
GCFC2-210	ENST00000492826	NR5A1	Q13285	461 aa		7.83	□□□□□ -1.16
GCFC2-210	ENST00000492826	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.82	□□□□□ -1.16
GCFC2-210	ENST00000492826	C4orf48	Q5BLP8	95 aa		7.82	□□□□□ -1.16
GCFC2-210	ENST00000492826	ITGB2	P05107	769 aa		7.81	□□□□□ -1.16
GCFC2-210	ENST00000492826	ARID5B	Q14865	1188 aa		7.81	□□□□□ -1.16
GCFC2-210	ENST00000492826	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.81	□□□□□ -1.16
GCFC2-210	ENST00000492826	DESI1	Q6ICB0	168 aa		7.81	□□□□□ -1.16
GCFC2-210	ENST00000492826	NUTM1	Q86Y26	1132 aa		7.81	□□□□□ -1.16
GCFC2-210	ENST00000492826	PRR7	Q8TB68	274 aa		7.81	□□□□□ -1.16
GCFC2-210	ENST00000492826	UPP2	O95045	317 aa		7.8	□□□□□ -1.16
GCFC2-210	ENST00000492826	KRTAP9-2	Q9BYQ4	174 aa		7.8	□□□□□ -1.16
GCFC2-210	ENST00000492826	CCDC155	Q8N6L0	562 aa		7.79	□□□□□ -1.16
GCFC2-210	ENST00000492826	GPCPD1	Q9NPB8	672 aa		7.79	□□□□□ -1.16
GCFC2-210	ENST00000492826	SPTLC1	O15269	473 aa		7.78	□□□□□ -1.16
GCFC2-210	ENST00000492826	MARS	P56192	900 aa	Known RBP	7.78	□□□□□ -1.16
GCFC2-210	ENST00000492826	SCARF2	Q96GP6	870 aa	Predicted RBP	7.78	□□□□□ -1.16
GCFC2-210	ENST00000492826	TTLL8	A6PVC2	850 aa		7.77	□□□□□ -1.17
GCFC2-210	ENST00000492826	NDUFV2	P19404	249 aa		7.77	□□□□□ -1.17
GCFC2-210	ENST00000492826	PLA2G4E	Q3MJ16	856 aa		7.77	□□□□□ -1.17
GCFC2-210	ENST00000492826	TSEN34	Q9BSV6	310 aa	Known RBP	7.77	□□□□□ -1.17
GCFC2-210	ENST00000492826	KRTAP9-6	A0A140TA67	174 aa		7.76	□□□□□ -1.17
GCFC2-210	ENST00000492826	SLC35F4	A4IF30	521 aa		7.76	□□□□□ -1.17
GCFC2-210	ENST00000492826	LYPD8	Q6UX82	237 aa		7.76	□□□□□ -1.17
GCFC2-210	ENST00000492826	SPIRE2	Q8WWL2	714 aa		7.76	□□□□□ -1.17
GCFC2-210	ENST00000492826	SPOCK3	Q9BQ16	436 aa		7.76	□□□□□ -1.17
GCFC2-210	ENST00000492826	MOXD2P	A6NHM9	499 aa		7.75	□□□□□ -1.17
GCFC2-210	ENST00000492826	FIGNL2	A6NMB9	653 aa		7.75	□□□□□ -1.17
GCFC2-210	ENST00000492826	MSTN	O14793	375 aa		7.75	□□□□□ -1.17
GCFC2-210	ENST00000492826	CLCN1	P35523	988 aa		7.75	□□□□□ -1.17
GCFC2-210	ENST00000492826	LYPD4	Q6UWN0	246 aa		7.75	□□□□□ -1.17
GCFC2-210	ENST00000492826	VWA5B2	Q8N398	1253 aa		7.75	□□□□□ -1.17
GCFC2-210	ENST00000492826	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.75	□□□□□ -1.17
GCFC2-210	ENST00000492826	F12	P00748	615 aa	Predicted RBP	7.74	□□□□□ -1.17
GCFC2-210	ENST00000492826	PROC	P04070	461 aa		7.74	□□□□□ -1.17
GCFC2-210	ENST00000492826	ITGA6	P23229	1130 aa		7.74	□□□□□ -1.17
GCFC2-210	ENST00000492826	CTH	P32929	405 aa		7.74	□□□□□ -1.17
GCFC2-210	ENST00000492826	CCDC102A	Q96A19	550 aa		7.74	□□□□□ -1.17
GCFC2-210	ENST00000492826	MAP10	Q9P2G4	905 aa		7.74	□□□□□ -1.17
GCFC2-210	ENST00000492826	MTMR2	Q13614	643 aa		7.73	□□□□□ -1.17
GCFC2-210	ENST00000492826	DCAF5	Q96JK2	942 aa		7.73	□□□□□ -1.17
GCFC2-210	ENST00000492826	C1QTNF2	Q9BXJ5	285 aa		7.73	□□□□□ -1.17
GCFC2-210	ENST00000492826	SPDYE5	A6NIY4	337 aa		7.72	□□□□□ -1.17
GCFC2-210	ENST00000492826	ADAMTS2	O95450	1211 aa		7.72	□□□□□ -1.17
GCFC2-210	ENST00000492826	PSMG3-AS1	Q96PY0	264 aa		7.72	□□□□□ -1.17
GCFC2-210	ENST00000492826	SPINT1	O43278	529 aa		7.71	□□□□□ -1.18
GCFC2-210	ENST00000492826	SV2A	Q7L0J3	742 aa		7.71	□□□□□ -1.18
GCFC2-210	ENST00000492826	CELA2B	P08218	269 aa	Predicted RBP	7.7	□□□□□ -1.18
GCFC2-210	ENST00000492826	FSHR	P23945	695 aa		7.7	□□□□□ -1.18
GCFC2-210	ENST00000492826	BPHL	Q86WA6	291 aa	Predicted RBP	7.7	□□□□□ -1.18
GCFC2-210	ENST00000492826	MAP4K5	Q9Y4K4	846 aa		7.7	□□□□□ -1.18
GCFC2-210	ENST00000492826	CDC14C	A4D256	554 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms