RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 NEXMIFQ5QGS0 1516 aa8.46□□□□□ -1.05
SEC13-219ENST00000492602 KANK4Q5T7N3 995 aaPredicted RBP8.46□□□□□ -1.06
SEC13-219ENST00000492602 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
SEC13-219ENST00000492602 SGIP1Q9BQI5 828 aa8.46□□□□□ -1.06
SEC13-219ENST00000492602 NAIPQ13075 1403 aa8.46□□□□□ -1.06
SEC13-219ENST00000492602 PLSCR1O15162 318 aa8.45□□□□□ -1.06
SEC13-219ENST00000492602 STRN4Q9NRL3 753 aa8.45□□□□□ -1.06
SEC13-219ENST00000492602 STK32BQ9NY57 414 aa8.45□□□□□ -1.06
SEC13-219ENST00000492602 E9PCH4 1651 aa8.45□□□□□ -1.06
SEC13-219ENST00000492602 GOLGB1Q14789 3259 aaKnown RBP8.45□□□□□ -1.06
SEC13-219ENST00000492602 ATP10DQ9P241 1426 aa8.45□□□□□ -1.06
SEC13-219ENST00000492602 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
SEC13-219ENST00000492602 APLP1P51693 650 aa8.44□□□□□ -1.06
SEC13-219ENST00000492602 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
SEC13-219ENST00000492602 ZNF526Q8TF50 670 aaPredicted RBP8.44□□□□□ -1.06
SEC13-219ENST00000492602 PHF8Q9UPP1 1060 aa8.44□□□□□ -1.06
SEC13-219ENST00000492602 SBNO1A3KN83 1393 aa8.44□□□□□ -1.06
SEC13-219ENST00000492602 PRAG1Q86YV5 1406 aa8.44□□□□□ -1.06
SEC13-219ENST00000492602 ABCA3Q99758 1704 aa8.43□□□□□ -1.06
SEC13-219ENST00000492602 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
SEC13-219ENST00000492602 DNAJC5GQ8N7S2 189 aa8.43□□□□□ -1.06
SEC13-219ENST00000492602 PRDM11Q9NQV5 511 aa8.43□□□□□ -1.06
SEC13-219ENST00000492602 MAP3K5Q99683 1374 aa8.43□□□□□ -1.06
SEC13-219ENST00000492602 KIF1AQ12756 1690 aa8.43□□□□□ -1.06
SEC13-219ENST00000492602 SLC15A2Q16348 729 aa8.42□□□□□ -1.06
SEC13-219ENST00000492602 PROM2Q8N271 834 aa8.42□□□□□ -1.06
SEC13-219ENST00000492602 TECPR2O15040 1411 aa8.42□□□□□ -1.06
SEC13-219ENST00000492602 VGFO15240 615 aaPredicted RBP8.41□□□□□ -1.06
SEC13-219ENST00000492602 GRIN3BO60391 1043 aa8.41□□□□□ -1.06
SEC13-219ENST00000492602 BARGINQ6ZT62 677 aa8.41□□□□□ -1.06
SEC13-219ENST00000492602 STK26Q9P289 416 aa8.41□□□□□ -1.06
SEC13-219ENST00000492602 C11orf95C9JLR9 678 aaPredicted RBP8.4□□□□□ -1.06
SEC13-219ENST00000492602 EVA1CP58658 441 aa8.4□□□□□ -1.06
SEC13-219ENST00000492602 CHRNA2Q15822 529 aa8.4□□□□□ -1.06
SEC13-219ENST00000492602 PTF1AQ7RTS3 328 aa8.39□□□□□ -1.07
SEC13-219ENST00000492602 PMFBP1Q8TBY8 1022 aa8.39□□□□□ -1.07
SEC13-219ENST00000492602 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
SEC13-219ENST00000492602 NUP155O75694 1391 aa8.38□□□□□ -1.07
SEC13-219ENST00000492602 PLEKHH1Q9ULM0 1364 aa8.38□□□□□ -1.07
SEC13-219ENST00000492602 YBX3P16989 372 aaKnown RBP eCLIP8.38□□□□□ -1.075e-17■■□□□ 14.1
SEC13-219ENST00000492602 TXNRD1Q16881 649 aa8.38□□□□□ -1.07
SEC13-219ENST00000492602 TCP11L2Q8N4U5 519 aa8.38□□□□□ -1.07
SEC13-219ENST00000492602 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
SEC13-219ENST00000492602 NRXN1Q9ULB1 1477 aa8.38□□□□□ -1.07
SEC13-219ENST00000492602 KIAA0232Q92628 1395 aa8.37□□□□□ -1.07
SEC13-219ENST00000492602 FMN2Q9NZ56 1722 aa8.37□□□□□ -1.07
SEC13-219ENST00000492602 OVOS2A0A0G2JMS6 1433 aa8.37□□□□□ -1.07
SEC13-219ENST00000492602 OVOS2A0A0J9YW53 1432 aa8.37□□□□□ -1.07
SEC13-219ENST00000492602 OVOS2Q6IE36 1432 aa8.37□□□□□ -1.07
SEC13-219ENST00000492602 RGPD3A6NKT7 1758 aaPredicted RBP8.36□□□□□ -1.07
SEC13-219ENST00000492602 RGPD4Q7Z3J3 1758 aa8.36□□□□□ -1.07
SEC13-219ENST00000492602 KIF3CO14782 793 aa8.36□□□□□ -1.07
SEC13-219ENST00000492602 POLD1P28340 1107 aa8.36□□□□□ -1.07
SEC13-219ENST00000492602 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
SEC13-219ENST00000492602 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
SEC13-219ENST00000492602 ZC3H6P61129 1189 aaKnown RBP8.35□□□□□ -1.07
SEC13-219ENST00000492602 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
SEC13-219ENST00000492602 KLRG1Q96E93 195 aa8.35□□□□□ -1.07
SEC13-219ENST00000492602 SSH2Q76I76 1423 aa8.35□□□□□ -1.07
SEC13-219ENST00000492602 HTRA3P83110 453 aa8.34□□□□□ -1.07
SEC13-219ENST00000492602 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
SEC13-219ENST00000492602 THRAP3Q9Y2W1 955 aaKnown RBP8.34□□□□□ -1.07
SEC13-219ENST00000492602 ADCY9O60503 1353 aa8.34□□□□□ -1.07
SEC13-219ENST00000492602 GPRASP1Q5JY77 1395 aa8.34□□□□□ -1.07
SEC13-219ENST00000492602 DHX57Q6P158 1386 aaKnown RBP8.34□□□□□ -1.07
SEC13-219ENST00000492602 AATKQ6ZMQ8 1374 aa8.34□□□□□ -1.07
SEC13-219ENST00000492602 RGPD8O14715 1765 aaPredicted RBP8.33□□□□□ -1.08
SEC13-219ENST00000492602 TOMM70O94826 608 aa8.32□□□□□ -1.08
SEC13-219ENST00000492602 DDB1Q16531 1140 aa8.32□□□□□ -1.08
SEC13-219ENST00000492602 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
SEC13-219ENST00000492602 ABCC11Q96J66 1382 aa8.32□□□□□ -1.08
SEC13-219ENST00000492602 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
SEC13-219ENST00000492602 CLTCL1P53675 1640 aa8.31□□□□□ -1.08
SEC13-219ENST00000492602 PCNTO95613 3336 aa8.31□□□□□ -1.08
SEC13-219ENST00000492602 ACIN1Q9UKV3 1341 aaKnown RBP8.3□□□□□ -1.08
SEC13-219ENST00000492602 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
SEC13-219ENST00000492602 PEAK1Q9H792 1746 aa8.3□□□□□ -1.08
SEC13-219ENST00000492602 SAFB2Q14151 953 aaKnown RBP eCLIP8.3□□□□□ -1.08
SEC13-219ENST00000492602 SLC16A10Q8TF71 515 aa8.3□□□□□ -1.08
SEC13-219ENST00000492602 ALS2Q96Q42 1657 aa8.3□□□□□ -1.08
SEC13-219ENST00000492602 TRPM3Q9HCF6 1732 aaPredicted RBP8.29□□□□□ -1.08
SEC13-219ENST00000492602 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
SEC13-219ENST00000492602 HSPA1AP0DMV8 641 aaKnown RBP8.29□□□□□ -1.08
SEC13-219ENST00000492602 HSPA1BP0DMV9 641 aaKnown RBP8.29□□□□□ -1.08
SEC13-219ENST00000492602 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
SEC13-219ENST00000492602 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
SEC13-219ENST00000492602 ATP7BP35670 1465 aa8.29□□□□□ -1.08
SEC13-219ENST00000492602 KIF1BO60333 1816 aa8.29□□□□□ -1.08
SEC13-219ENST00000492602 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
SEC13-219ENST00000492602 MARCH10Q8NA82 808 aaPredicted RBP8.28□□□□□ -1.08
SEC13-219ENST00000492602 NGDNQ8NEJ9 315 aaKnown RBP8.28□□□□□ -1.08
SEC13-219ENST00000492602 WDR90Q96KV7 1748 aa8.28□□□□□ -1.08
SEC13-219ENST00000492602 IFT172Q9UG01 1749 aa8.28□□□□□ -1.08
SEC13-219ENST00000492602 ADGRF5Q8IZF2 1346 aa8.28□□□□□ -1.08
SEC13-219ENST00000492602 CRYBG1Q9Y4K1 1723 aa8.27□□□□□ -1.09
SEC13-219ENST00000492602 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
SEC13-219ENST00000492602 APLP2Q06481 763 aa8.26□□□□□ -1.09
SEC13-219ENST00000492602 SIRT1Q96EB6 747 aa8.26□□□□□ -1.09
SEC13-219ENST00000492602 ANKARQ7Z5J8 1434 aa8.26□□□□□ -1.09
SEC13-219ENST00000492602 YTHDC2Q9H6S0 1430 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms