RNA–Protein interactions for RNA: ENST00000492588.1

C9orf16-204, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 1,570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-204ENST00000492588 NGDNQ8NEJ9 315 aaKnown RBP23.93■■□□□ 1.42
C9orf16-204ENST00000492588 ROBO1Q9Y6N7 1651 aa23.93■■□□□ 1.42
C9orf16-204ENST00000492588 CGNL1Q0VF96 1302 aa23.92■■□□□ 1.42
C9orf16-204ENST00000492588 BRINP3Q76B58 766 aa23.92■■□□□ 1.42
C9orf16-204ENST00000492588 YTHDC1Q96MU7 727 aaKnown RBP23.92■■□□□ 1.42
C9orf16-204ENST00000492588 BRD4O60885 1362 aaPredicted RBP23.92■■□□□ 1.42
C9orf16-204ENST00000492588 RALBP1Q15311 655 aa23.91■■□□□ 1.42
C9orf16-204ENST00000492588 PXDNQ92626 1479 aa23.91■■□□□ 1.42
C9orf16-204ENST00000492588 ALS2Q96Q42 1657 aa23.9■■□□□ 1.42
C9orf16-204ENST00000492588 TTC21BQ7Z4L5 1316 aa23.89■■□□□ 1.42
C9orf16-204ENST00000492588 FYB1O15117 783 aa23.87■■□□□ 1.41
C9orf16-204ENST00000492588 FOXO3O43524 673 aa23.87■■□□□ 1.41
C9orf16-204ENST00000492588 CC2D1BQ5T0F9 858 aaKnown RBP23.87■■□□□ 1.41
C9orf16-204ENST00000492588 OVOS2A0A0J9YW53 1432 aa23.87■■□□□ 1.41
C9orf16-204ENST00000492588 OVOS2Q6IE36 1432 aa23.87■■□□□ 1.41
C9orf16-204ENST00000492588 AHDC1Q5TGY3 1603 aaPredicted RBP23.86■■□□□ 1.41
C9orf16-204ENST00000492588 TTC21AQ8NDW8 1320 aa23.86■■□□□ 1.41
C9orf16-204ENST00000492588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
C9orf16-204ENST00000492588 CERKQ8TCT0 537 aa23.85■■□□□ 1.41
C9orf16-204ENST00000492588 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
C9orf16-204ENST00000492588 NME9Q86XW9 330 aa23.83■■□□□ 1.41
C9orf16-204ENST00000492588 DDX17Q92841 729 aaKnown RBP23.82■■□□□ 1.4
C9orf16-204ENST00000492588 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
C9orf16-204ENST00000492588 GGNBP2Q9H3C7 697 aa23.82■■□□□ 1.4
C9orf16-204ENST00000492588 PSME1Q06323 249 aa23.81■■□□□ 1.4
C9orf16-204ENST00000492588 SBNO1A3KN83 1393 aa23.8■■□□□ 1.4
C9orf16-204ENST00000492588 CRYBG1Q9Y4K1 1723 aa23.8■■□□□ 1.4
C9orf16-204ENST00000492588 XPCQ01831 940 aaPredicted RBP23.8■■□□□ 1.4
C9orf16-204ENST00000492588 CNGB1Q14028 1251 aaPredicted RBP23.8■■□□□ 1.4
C9orf16-204ENST00000492588 SOS2Q07890 1332 aaPredicted RBP23.8■■□□□ 1.4
C9orf16-204ENST00000492588 KRT28Q7Z3Y7 464 aa23.79■■□□□ 1.4
C9orf16-204ENST00000492588 TNS3Q68CZ2 1445 aa23.79■■□□□ 1.4
C9orf16-204ENST00000492588 ZRANB1Q9UGI0 708 aa23.78■■□□□ 1.4
C9orf16-204ENST00000492588 TOM1O60784 492 aa23.78■■□□□ 1.4
C9orf16-204ENST00000492588 MED1Q15648 1581 aaPredicted RBP23.78■■□□□ 1.4
C9orf16-204ENST00000492588 MYBBP1AQ9BQG0 1328 aaKnown RBP23.77■■□□□ 1.4
C9orf16-204ENST00000492588 MRS2Q9HD23 443 aa23.77■■□□□ 1.4
C9orf16-204ENST00000492588 COL16A1Q07092 1604 aaPredicted RBP23.76■■□□□ 1.39
C9orf16-204ENST00000492588 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
C9orf16-204ENST00000492588 SLIT3O75094 1523 aa23.75■■□□□ 1.39
C9orf16-204ENST00000492588 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
C9orf16-204ENST00000492588 PHLPP1O60346 1717 aa23.74■■□□□ 1.39
C9orf16-204ENST00000492588 MAP2P11137 1827 aaKnown RBP23.74■■□□□ 1.39
C9orf16-204ENST00000492588 PHRF1Q9P1Y6 1649 aaKnown RBP23.74■■□□□ 1.39
C9orf16-204ENST00000492588 UBAP1LF5GYI3 381 aa23.74■■□□□ 1.39
C9orf16-204ENST00000492588 SPATA31A3Q5VYP0 1347 aa23.73■■□□□ 1.39
C9orf16-204ENST00000492588 PAK3O75914 559 aaPredicted RBP23.73■■□□□ 1.39
C9orf16-204ENST00000492588 ABCA3Q99758 1704 aa23.72■■□□□ 1.39
C9orf16-204ENST00000492588 NFAT5O94916 1531 aa23.72■■□□□ 1.39
C9orf16-204ENST00000492588 SMG6Q86US8 1419 aaKnown RBP23.72■■□□□ 1.39
C9orf16-204ENST00000492588 PPP2R1AP30153 589 aa23.72■■□□□ 1.39
C9orf16-204ENST00000492588 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
C9orf16-204ENST00000492588 ABTB2Q8N961 1025 aa23.72■■□□□ 1.39
C9orf16-204ENST00000492588 COG3Q96JB2 828 aa23.72■■□□□ 1.39
C9orf16-204ENST00000492588 AATKQ6ZMQ8 1374 aa23.71■■□□□ 1.39
C9orf16-204ENST00000492588 USP19O94966 1318 aa23.7■■□□□ 1.39
C9orf16-204ENST00000492588 NLRP6P59044 892 aa23.69■■□□□ 1.38
C9orf16-204ENST00000492588 COL22A1Q8NFW1 1626 aaPredicted RBP23.69■■□□□ 1.38
C9orf16-204ENST00000492588 ARHGEF10O15013 1369 aa23.68■■□□□ 1.38
C9orf16-204ENST00000492588 CCDC184Q52MB2 194 aa23.68■■□□□ 1.38
C9orf16-204ENST00000492588 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
C9orf16-204ENST00000492588 LTN1O94822 1766 aa23.67■■□□□ 1.38
C9orf16-204ENST00000492588 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
C9orf16-204ENST00000492588 TNNT2P45379 298 aaPredicted RBP23.66■■□□□ 1.38
C9orf16-204ENST00000492588 PIP4K2BP78356 416 aa23.65■■□□□ 1.38
C9orf16-204ENST00000492588 COL3A1P02461 1466 aaPredicted RBP23.64■■□□□ 1.38
C9orf16-204ENST00000492588 FBLN1P23142 703 aa23.64■■□□□ 1.37
C9orf16-204ENST00000492588 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
C9orf16-204ENST00000492588 CDK12Q9NYV4 1490 aaPredicted RBP23.63■■□□□ 1.37
C9orf16-204ENST00000492588 INSRP06213 1382 aa23.62■■□□□ 1.37
C9orf16-204ENST00000492588 PNISRQ8TF01 805 aaKnown RBP23.61■■□□□ 1.37
C9orf16-204ENST00000492588 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
C9orf16-204ENST00000492588 PNPLA6Q8IY17 1366 aa23.61■■□□□ 1.37
C9orf16-204ENST00000492588 LMOD2Q6P5Q4 547 aa23.6■■□□□ 1.37
C9orf16-204ENST00000492588 MTHFSP49914 203 aa23.59■■□□□ 1.37
C9orf16-204ENST00000492588 RRS1Q15050 365 aaKnown RBP23.58■■□□□ 1.37
C9orf16-204ENST00000492588 EMILIN1Q9Y6C2 1016 aa23.58■■□□□ 1.37
C9orf16-204ENST00000492588 LRRC59Q96AG4 307 aaKnown RBP23.57■■□□□ 1.36
C9orf16-204ENST00000492588 GCP02774 474 aa23.57■■□□□ 1.36
C9orf16-204ENST00000492588 FAM9BQ8IZU0 186 aa23.57■■□□□ 1.36
C9orf16-204ENST00000492588 MAP3K19Q56UN5 1328 aa23.56■■□□□ 1.36
C9orf16-204ENST00000492588 HNRNPUQ00839 825 aaKnown RBP eCLIP23.56■■□□□ 1.36
C9orf16-204ENST00000492588 KCNH5Q8NCM2 988 aa23.56■■□□□ 1.36
C9orf16-204ENST00000492588 COL18A1P39060 1754 aa23.56■■□□□ 1.36
C9orf16-204ENST00000492588 KIF24Q5T7B8 1368 aa23.56■■□□□ 1.36
C9orf16-204ENST00000492588 ABCC6O95255 1503 aa23.55■■□□□ 1.36
C9orf16-204ENST00000492588 SOX12O15370 315 aa23.54■■□□□ 1.36
C9orf16-204ENST00000492588 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
C9orf16-204ENST00000492588 CABLES1Q8TDN4 633 aa23.53■■□□□ 1.36
C9orf16-204ENST00000492588 FLT4P35916 1363 aa23.53■■□□□ 1.36
C9orf16-204ENST00000492588 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
C9orf16-204ENST00000492588 CPDO75976 1380 aa23.52■■□□□ 1.36
C9orf16-204ENST00000492588 ARHGEF25Q86VW2 580 aa23.52■■□□□ 1.36
C9orf16-204ENST00000492588 RGPD1P0DJD0 1748 aa23.51■■□□□ 1.35
C9orf16-204ENST00000492588 LMO7Q8WWI1 1683 aa23.51■■□□□ 1.35
C9orf16-204ENST00000492588 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
C9orf16-204ENST00000492588 CFAP53Q96M91 514 aa23.47■■□□□ 1.35
C9orf16-204ENST00000492588 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
C9orf16-204ENST00000492588 PLEKHG5O94827 1062 aa23.46■■□□□ 1.35
C9orf16-204ENST00000492588 HOXC9P31274 260 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms