RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
COPS7B-222ENST00000492423 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
COPS7B-222ENST00000492423 RALBP1Q15311 655 aa20.32■□□□□ 0.84
COPS7B-222ENST00000492423 IQSEC2Q5JU85 1478 aa20.31■□□□□ 0.84
COPS7B-222ENST00000492423 C1orf167Q5SNV9 1468 aa20.31■□□□□ 0.84
COPS7B-222ENST00000492423 USP6P35125 1406 aa20.31■□□□□ 0.84
COPS7B-222ENST00000492423 NSD2O96028 1365 aa20.31■□□□□ 0.84
COPS7B-222ENST00000492423 ACEP12821 1306 aa20.3■□□□□ 0.84
COPS7B-222ENST00000492423 MSH6P52701 1360 aa20.3■□□□□ 0.84
COPS7B-222ENST00000492423 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
COPS7B-222ENST00000492423 USP54Q70EL1 1684 aa20.29■□□□□ 0.84
COPS7B-222ENST00000492423 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
COPS7B-222ENST00000492423 MARF1Q9Y4F3 1742 aaKnown RBP20.29■□□□□ 0.84
COPS7B-222ENST00000492423 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
COPS7B-222ENST00000492423 PIK3C2AO00443 1686 aa20.28■□□□□ 0.84
COPS7B-222ENST00000492423 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.84
COPS7B-222ENST00000492423 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.84
COPS7B-222ENST00000492423 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
COPS7B-222ENST00000492423 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
COPS7B-222ENST00000492423 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
COPS7B-222ENST00000492423 FYB1O15117 783 aa20.23■□□□□ 0.83
COPS7B-222ENST00000492423 ATF3P18847 181 aa20.23■□□□□ 0.83
COPS7B-222ENST00000492423 BRD4O60885 1362 aaPredicted RBP20.22■□□□□ 0.83
COPS7B-222ENST00000492423 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
COPS7B-222ENST00000492423 NGDNQ8NEJ9 315 aaKnown RBP20.22■□□□□ 0.83
COPS7B-222ENST00000492423 ORAI2Q96SN7 254 aa20.22■□□□□ 0.83
COPS7B-222ENST00000492423 TTC21BQ7Z4L5 1316 aa20.22■□□□□ 0.83
COPS7B-222ENST00000492423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
COPS7B-222ENST00000492423 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
COPS7B-222ENST00000492423 OVOS2A0A0J9YW53 1432 aa20.2■□□□□ 0.82
COPS7B-222ENST00000492423 OVOS2Q6IE36 1432 aa20.2■□□□□ 0.82
COPS7B-222ENST00000492423 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
COPS7B-222ENST00000492423 ESCO1Q5FWF5 840 aa20.2■□□□□ 0.82
COPS7B-222ENST00000492423 NME9Q86XW9 330 aa20.2■□□□□ 0.82
COPS7B-222ENST00000492423 MAP2P11137 1827 aaKnown RBP20.2■□□□□ 0.82
COPS7B-222ENST00000492423 ALS2Q96Q42 1657 aa20.19■□□□□ 0.82
COPS7B-222ENST00000492423 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
COPS7B-222ENST00000492423 NLRP13Q86W25 1043 aa20.19■□□□□ 0.82
COPS7B-222ENST00000492423 NHSL1Q5SYE7 1610 aa20.18■□□□□ 0.82
COPS7B-222ENST00000492423 TTC21AQ8NDW8 1320 aa20.18■□□□□ 0.82
COPS7B-222ENST00000492423 MRS2Q9HD23 443 aa20.17■□□□□ 0.82
COPS7B-222ENST00000492423 ZRANB1Q9UGI0 708 aa20.17■□□□□ 0.82
COPS7B-222ENST00000492423 SHPRHQ149N8 1683 aa20.16■□□□□ 0.82
COPS7B-222ENST00000492423 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
COPS7B-222ENST00000492423 CAPN15O75808 1086 aa20.15■□□□□ 0.82
COPS7B-222ENST00000492423 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
COPS7B-222ENST00000492423 PXDNQ92626 1479 aa20.13■□□□□ 0.81
COPS7B-222ENST00000492423 CRYBG1Q9Y4K1 1723 aa20.12■□□□□ 0.81
COPS7B-222ENST00000492423 ROBO1Q9Y6N7 1651 aa20.12■□□□□ 0.81
COPS7B-222ENST00000492423 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
COPS7B-222ENST00000492423 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
COPS7B-222ENST00000492423 FOXO3O43524 673 aa20.1■□□□□ 0.81
COPS7B-222ENST00000492423 BRINP3Q76B58 766 aa20.1■□□□□ 0.81
COPS7B-222ENST00000492423 COG3Q96JB2 828 aa20.1■□□□□ 0.81
COPS7B-222ENST00000492423 COL3A1P02461 1466 aaPredicted RBP20.1■□□□□ 0.81
COPS7B-222ENST00000492423 PEAK1Q9H792 1746 aa20.1■□□□□ 0.81
COPS7B-222ENST00000492423 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
COPS7B-222ENST00000492423 DSG3P32926 999 aa20.09■□□□□ 0.81
COPS7B-222ENST00000492423 SLAIN2Q9P270 581 aa20.09■□□□□ 0.81
COPS7B-222ENST00000492423 LTN1O94822 1766 aa20.08■□□□□ 0.81
COPS7B-222ENST00000492423 SLIT3O75094 1523 aa20.08■□□□□ 0.81
COPS7B-222ENST00000492423 PSME1Q06323 249 aa20.08■□□□□ 0.81
COPS7B-222ENST00000492423 PHRF1Q9P1Y6 1649 aaKnown RBP20.08■□□□□ 0.8
COPS7B-222ENST00000492423 XPCQ01831 940 aaPredicted RBP20.07■□□□□ 0.8
COPS7B-222ENST00000492423 KRT28Q7Z3Y7 464 aa20.07■□□□□ 0.8
COPS7B-222ENST00000492423 PNISRQ8TF01 805 aaKnown RBP20.07■□□□□ 0.8
COPS7B-222ENST00000492423 SBNO1A3KN83 1393 aa20.07■□□□□ 0.8
COPS7B-222ENST00000492423 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
COPS7B-222ENST00000492423 DDX17Q92841 729 aaKnown RBP20.06■□□□□ 0.8
COPS7B-222ENST00000492423 NFAT5O94916 1531 aa20.06■□□□□ 0.8
COPS7B-222ENST00000492423 AHDC1Q5TGY3 1603 aaPredicted RBP20.05■□□□□ 0.8
COPS7B-222ENST00000492423 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
COPS7B-222ENST00000492423 MED1Q15648 1581 aaPredicted RBP20.05■□□□□ 0.8
COPS7B-222ENST00000492423 ABCA3Q99758 1704 aa20.05■□□□□ 0.8
COPS7B-222ENST00000492423 TNS3Q68CZ2 1445 aa20.04■□□□□ 0.8
COPS7B-222ENST00000492423 PAK3O75914 559 aaPredicted RBP20.04■□□□□ 0.8
COPS7B-222ENST00000492423 FBLN1P23142 703 aa20.04■□□□□ 0.8
COPS7B-222ENST00000492423 MTHFSP49914 203 aa20.04■□□□□ 0.8
COPS7B-222ENST00000492423 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
COPS7B-222ENST00000492423 ABTB2Q8N961 1025 aa20.03■□□□□ 0.8
COPS7B-222ENST00000492423 NLRP6P59044 892 aa20.02■□□□□ 0.8
COPS7B-222ENST00000492423 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.8
COPS7B-222ENST00000492423 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
COPS7B-222ENST00000492423 POLKQ9UBT6 870 aa20.02■□□□□ 0.8
COPS7B-222ENST00000492423 INSRP06213 1382 aa20.01■□□□□ 0.79
COPS7B-222ENST00000492423 PNPLA6Q8IY17 1366 aa20.01■□□□□ 0.79
COPS7B-222ENST00000492423 NUTM2GQ5VZR2 741 aa20.01■□□□□ 0.79
COPS7B-222ENST00000492423 USP19O94966 1318 aa20.01■□□□□ 0.79
COPS7B-222ENST00000492423 SOS2Q07890 1332 aaPredicted RBP20.01■□□□□ 0.79
COPS7B-222ENST00000492423 KCNA4P22459 653 aa20■□□□□ 0.79
COPS7B-222ENST00000492423 EMILIN1Q9Y6C2 1016 aa20■□□□□ 0.79
COPS7B-222ENST00000492423 BLMP54132 1417 aaPredicted RBP19.99■□□□□ 0.79
COPS7B-222ENST00000492423 RRS1Q15050 365 aaKnown RBP19.98■□□□□ 0.79
COPS7B-222ENST00000492423 PHLPP1O60346 1717 aa19.98■□□□□ 0.79
COPS7B-222ENST00000492423 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
COPS7B-222ENST00000492423 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
COPS7B-222ENST00000492423 RGPD1P0DJD0 1748 aa19.96■□□□□ 0.79
COPS7B-222ENST00000492423 COL16A1Q07092 1604 aaPredicted RBP19.96■□□□□ 0.79
COPS7B-222ENST00000492423 MAP3K19Q56UN5 1328 aa19.95■□□□□ 0.78
COPS7B-222ENST00000492423 ARHGEF10O15013 1369 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms