RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 KIF1BO60333 1816 aa17.9■□□□□ 0.46
CACNA1C-228ENST00000492150 TECPR2O15040 1411 aa17.89■□□□□ 0.46
CACNA1C-228ENST00000492150 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
CACNA1C-228ENST00000492150 RGPD8O14715 1765 aaPredicted RBP17.89■□□□□ 0.45
CACNA1C-228ENST00000492150 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
CACNA1C-228ENST00000492150 ITGAEP38570 1179 aa17.89■□□□□ 0.45
CACNA1C-228ENST00000492150 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
CACNA1C-228ENST00000492150 ZBTB7AO95365 584 aa17.88■□□□□ 0.45
CACNA1C-228ENST00000492150 CLTCL1P53675 1640 aa17.87■□□□□ 0.45
CACNA1C-228ENST00000492150 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
CACNA1C-228ENST00000492150 SGIP1Q9BQI5 828 aa17.87■□□□□ 0.45
CACNA1C-228ENST00000492150 CRYBG1Q9Y4K1 1723 aa17.86■□□□□ 0.45
CACNA1C-228ENST00000492150 C11orf95C9JLR9 678 aaPredicted RBP17.86■□□□□ 0.45
CACNA1C-228ENST00000492150 PLSCR1O15162 318 aa17.86■□□□□ 0.45
CACNA1C-228ENST00000492150 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
CACNA1C-228ENST00000492150 PDE3BQ13370 1112 aa17.85■□□□□ 0.45
CACNA1C-228ENST00000492150 ALS2Q96Q42 1657 aa17.85■□□□□ 0.45
CACNA1C-228ENST00000492150 PDGFDQ9GZP0 370 aaPredicted RBP17.85■□□□□ 0.45
CACNA1C-228ENST00000492150 TRPM3Q9HCF6 1732 aaPredicted RBP17.85■□□□□ 0.45
CACNA1C-228ENST00000492150 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
CACNA1C-228ENST00000492150 PHF8Q9UPP1 1060 aa17.85■□□□□ 0.45
CACNA1C-228ENST00000492150 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
CACNA1C-228ENST00000492150 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
CACNA1C-228ENST00000492150 SBF2Q86WG5 1849 aa17.82■□□□□ 0.44
CACNA1C-228ENST00000492150 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
CACNA1C-228ENST00000492150 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
CACNA1C-228ENST00000492150 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
CACNA1C-228ENST00000492150 GPR162Q16538 588 aa17.81■□□□□ 0.44
CACNA1C-228ENST00000492150 PPLO60437 1756 aa17.8■□□□□ 0.44
CACNA1C-228ENST00000492150 PEAK1Q9H792 1746 aa17.8■□□□□ 0.44
CACNA1C-228ENST00000492150 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
CACNA1C-228ENST00000492150 PRELPP51888 382 aa17.79■□□□□ 0.44
CACNA1C-228ENST00000492150 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
CACNA1C-228ENST00000492150 GOLGB1Q14789 3259 aaKnown RBP17.78■□□□□ 0.44
CACNA1C-228ENST00000492150 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
CACNA1C-228ENST00000492150 ARXQ96QS3 562 aa17.77■□□□□ 0.44
CACNA1C-228ENST00000492150 PCDH10Q9P2E7 1040 aa17.77■□□□□ 0.44
CACNA1C-228ENST00000492150 RPGRIP1LQ68CZ1 1315 aa17.76■□□□□ 0.43
CACNA1C-228ENST00000492150 PRDM11Q9NQV5 511 aa17.76■□□□□ 0.43
CACNA1C-228ENST00000492150 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
CACNA1C-228ENST00000492150 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
CACNA1C-228ENST00000492150 PLEKHH1Q9ULM0 1364 aa17.75■□□□□ 0.43
CACNA1C-228ENST00000492150 OVOS2A0A0G2JMS6 1433 aa17.74■□□□□ 0.43
CACNA1C-228ENST00000492150 OVOS2A0A0J9YW53 1432 aa17.74■□□□□ 0.43
CACNA1C-228ENST00000492150 OVOS2Q6IE36 1432 aa17.74■□□□□ 0.43
CACNA1C-228ENST00000492150 ATP10DQ9P241 1426 aa17.73■□□□□ 0.43
CACNA1C-228ENST00000492150 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
CACNA1C-228ENST00000492150 STK32BQ9NY57 414 aa17.72■□□□□ 0.43
CACNA1C-228ENST00000492150 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
CACNA1C-228ENST00000492150 PROM2Q8N271 834 aa17.71■□□□□ 0.43
CACNA1C-228ENST00000492150 ANKARQ7Z5J8 1434 aa17.71■□□□□ 0.43
CACNA1C-228ENST00000492150 CAPN15O75808 1086 aa17.7■□□□□ 0.42
CACNA1C-228ENST00000492150 COL13A1Q5TAT6 717 aaPredicted RBP17.7■□□□□ 0.42
CACNA1C-228ENST00000492150 THRAP3Q9Y2W1 955 aaKnown RBP17.7■□□□□ 0.42
CACNA1C-228ENST00000492150 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
CACNA1C-228ENST00000492150 KIAA0232Q92628 1395 aa17.69■□□□□ 0.42
CACNA1C-228ENST00000492150 TCP11L2Q8N4U5 519 aa17.69■□□□□ 0.42
CACNA1C-228ENST00000492150 GPBP1L1Q9HC44 474 aaPredicted RBP17.69■□□□□ 0.42
CACNA1C-228ENST00000492150 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
CACNA1C-228ENST00000492150 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
CACNA1C-228ENST00000492150 PHRF1Q9P1Y6 1649 aaKnown RBP17.69■□□□□ 0.42
CACNA1C-228ENST00000492150 APLP1P51693 650 aa17.68■□□□□ 0.42
CACNA1C-228ENST00000492150 SIRT1Q96EB6 747 aa17.68■□□□□ 0.42
CACNA1C-228ENST00000492150 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
CACNA1C-228ENST00000492150 ATP7BP35670 1465 aa17.68■□□□□ 0.42
CACNA1C-228ENST00000492150 AATKQ6ZMQ8 1374 aa17.67■□□□□ 0.42
CACNA1C-228ENST00000492150 GRIN3BO60391 1043 aa17.67■□□□□ 0.42
CACNA1C-228ENST00000492150 DNAJC5GQ8N7S2 189 aa17.67■□□□□ 0.42
CACNA1C-228ENST00000492150 STK26Q9P289 416 aa17.66■□□□□ 0.42
CACNA1C-228ENST00000492150 ADCY9O60503 1353 aa17.66■□□□□ 0.42
CACNA1C-228ENST00000492150 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
CACNA1C-228ENST00000492150 BCL9O00512 1426 aa17.65■□□□□ 0.42
CACNA1C-228ENST00000492150 TNS4Q8IZW8 715 aa17.64■□□□□ 0.41
CACNA1C-228ENST00000492150 LRRC37A3O60309 1634 aa17.64■□□□□ 0.41
CACNA1C-228ENST00000492150 LMO7Q8WWI1 1683 aa17.63■□□□□ 0.41
CACNA1C-228ENST00000492150 PAPPAQ13219 1627 aa17.62■□□□□ 0.41
CACNA1C-228ENST00000492150 CHRNA2Q15822 529 aa17.62■□□□□ 0.41
CACNA1C-228ENST00000492150 TXNRD1Q16881 649 aa17.62■□□□□ 0.41
CACNA1C-228ENST00000492150 PMFBP1Q8TBY8 1022 aa17.62■□□□□ 0.41
CACNA1C-228ENST00000492150 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
CACNA1C-228ENST00000492150 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
CACNA1C-228ENST00000492150 YTHDC2Q9H6S0 1430 aaKnown RBP17.62■□□□□ 0.41
CACNA1C-228ENST00000492150 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
CACNA1C-228ENST00000492150 EVA1CP58658 441 aa17.6■□□□□ 0.41
CACNA1C-228ENST00000492150 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
CACNA1C-228ENST00000492150 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
CACNA1C-228ENST00000492150 ADGRF5Q8IZF2 1346 aa17.6■□□□□ 0.41
CACNA1C-228ENST00000492150 AKAP12Q02952 1782 aa17.59■□□□□ 0.41
CACNA1C-228ENST00000492150 QSER1Q2KHR3 1735 aa17.59■□□□□ 0.41
CACNA1C-228ENST00000492150 PTF1AQ7RTS3 328 aa17.58■□□□□ 0.4
CACNA1C-228ENST00000492150 YBX3P16989 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
CACNA1C-228ENST00000492150 JMYQ8N9B5 988 aa17.57■□□□□ 0.4
CACNA1C-228ENST00000492150 WDR90Q96KV7 1748 aa17.57■□□□□ 0.4
CACNA1C-228ENST00000492150 SLC16A10Q8TF71 515 aa17.55■□□□□ 0.4
CACNA1C-228ENST00000492150 WNK3Q9BYP7 1800 aa17.55■□□□□ 0.4
CACNA1C-228ENST00000492150 KIF3CO14782 793 aa17.54■□□□□ 0.4
CACNA1C-228ENST00000492150 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
CACNA1C-228ENST00000492150 TMEM132EQ6IEE7 984 aa17.54■□□□□ 0.4
CACNA1C-228ENST00000492150 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
CACNA1C-228ENST00000492150 PIK3C2GO75747 1445 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms