RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 NWD2Q9ULI1 1742 aa22.06■■□□□ 1.12
IMP4-216ENST00000490895 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
IMP4-216ENST00000490895 ACEP12821 1306 aa22.06■■□□□ 1.12
IMP4-216ENST00000490895 PLCH1Q4KWH8 1693 aa22.05■■□□□ 1.12
IMP4-216ENST00000490895 NBPF8Q3BBV2 869 aa22.05■■□□□ 1.12
IMP4-216ENST00000490895 TRPM1Q7Z4N2 1603 aa22.03■■□□□ 1.12
IMP4-216ENST00000490895 SRPK2P78362 688 aaKnown RBP22.03■■□□□ 1.12
IMP4-216ENST00000490895 EP400Q96L91 3159 aa22.02■■□□□ 1.12
IMP4-216ENST00000490895 CRYBG1Q9Y4K1 1723 aa22.02■■□□□ 1.12
IMP4-216ENST00000490895 CABP2Q9NPB3 220 aa22.01■■□□□ 1.11
IMP4-216ENST00000490895 QRICH2Q9H0J4 1663 aa22.01■■□□□ 1.11
IMP4-216ENST00000490895 ROCK2O75116 1388 aaKnown RBP22■■□□□ 1.11
IMP4-216ENST00000490895 ONECUT3O60422 494 aaPredicted RBP22■■□□□ 1.11
IMP4-216ENST00000490895 BTG4Q9NY30 223 aa22■■□□□ 1.11
IMP4-216ENST00000490895 PPIP5K1Q6PFW1 1433 aa21.99■■□□□ 1.11
IMP4-216ENST00000490895 CCDC9Q9Y3X0 531 aaKnown RBP21.99■■□□□ 1.11
IMP4-216ENST00000490895 COL14A1Q05707 1796 aaKnown RBP21.99■■□□□ 1.11
IMP4-216ENST00000490895 SEPT12Q8IYM1 358 aa21.98■■□□□ 1.11
IMP4-216ENST00000490895 NRAPQ86VF7 1730 aa21.97■■□□□ 1.11
IMP4-216ENST00000490895 PRDM11Q9NQV5 511 aa21.97■■□□□ 1.11
IMP4-216ENST00000490895 NUTM2GQ5VZR2 741 aa21.96■■□□□ 1.11
IMP4-216ENST00000490895 TRIM26Q12899 539 aaPredicted RBP21.95■■□□□ 1.1
IMP4-216ENST00000490895 CCDC125Q86Z20 511 aa21.95■■□□□ 1.1
IMP4-216ENST00000490895 EVC2Q86UK5 1308 aa21.95■■□□□ 1.1
IMP4-216ENST00000490895 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
IMP4-216ENST00000490895 ABTB2Q8N961 1025 aa21.94■■□□□ 1.1
IMP4-216ENST00000490895 CABP1Q9NZU7 370 aa21.94■■□□□ 1.1
IMP4-216ENST00000490895 BRD4O60885 1362 aaPredicted RBP21.94■■□□□ 1.1
IMP4-216ENST00000490895 PHRF1Q9P1Y6 1649 aaKnown RBP21.93■■□□□ 1.1
IMP4-216ENST00000490895 USP19O94966 1318 aa21.92■■□□□ 1.1
IMP4-216ENST00000490895 BRWD3Q6RI45 1802 aa21.92■■□□□ 1.1
IMP4-216ENST00000490895 SPATA31A5Q5VU36 1347 aa21.91■■□□□ 1.1
IMP4-216ENST00000490895 SPATA31A7Q8IWB4 1347 aa21.91■■□□□ 1.1
IMP4-216ENST00000490895 ZC3H6P61129 1189 aaKnown RBP21.91■■□□□ 1.1
IMP4-216ENST00000490895 CHRNA2Q15822 529 aa21.91■■□□□ 1.1
IMP4-216ENST00000490895 USP6P35125 1406 aa21.9■■□□□ 1.1
IMP4-216ENST00000490895 FAM98CQ17RN3 349 aaKnown RBP21.9■■□□□ 1.1
IMP4-216ENST00000490895 KRT27Q7Z3Y8 459 aa21.89■■□□□ 1.09
IMP4-216ENST00000490895 NLRP13Q86W25 1043 aa21.89■■□□□ 1.09
IMP4-216ENST00000490895 TONSLQ96HA7 1378 aa21.88■■□□□ 1.09
IMP4-216ENST00000490895 CPDO75976 1380 aa21.87■■□□□ 1.09
IMP4-216ENST00000490895 NRKQ7Z2Y5 1582 aa21.87■■□□□ 1.09
IMP4-216ENST00000490895 BLMP54132 1417 aaPredicted RBP21.87■■□□□ 1.09
IMP4-216ENST00000490895 SSH2Q76I76 1423 aa21.87■■□□□ 1.09
IMP4-216ENST00000490895 SBNO2Q9Y2G9 1366 aa21.87■■□□□ 1.09
IMP4-216ENST00000490895 A0A0G2JS52 829 aa21.86■■□□□ 1.09
IMP4-216ENST00000490895 GCP02774 474 aa21.86■■□□□ 1.09
IMP4-216ENST00000490895 MYT1Q01538 1121 aa21.86■■□□□ 1.09
IMP4-216ENST00000490895 CARD11Q9BXL7 1154 aa21.86■■□□□ 1.09
IMP4-216ENST00000490895 SPATA31A1Q5TZJ5 1347 aa21.84■■□□□ 1.09
IMP4-216ENST00000490895 STRN4Q9NRL3 753 aa21.84■■□□□ 1.09
IMP4-216ENST00000490895 NLRP6P59044 892 aa21.83■■□□□ 1.09
IMP4-216ENST00000490895 ZNF692Q9BU19 519 aaPredicted RBP21.83■■□□□ 1.09
IMP4-216ENST00000490895 CAMTA1Q9Y6Y1 1673 aa21.82■■□□□ 1.08
IMP4-216ENST00000490895 THSD7AQ9UPZ6 1657 aa21.81■■□□□ 1.08
IMP4-216ENST00000490895 LMO7Q8WWI1 1683 aa21.8■■□□□ 1.08
IMP4-216ENST00000490895 EVA1CP58658 441 aa21.8■■□□□ 1.08
IMP4-216ENST00000490895 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
IMP4-216ENST00000490895 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
IMP4-216ENST00000490895 SLIT3O75094 1523 aa21.79■■□□□ 1.08
IMP4-216ENST00000490895 SF3B2Q13435 895 aaKnown RBP21.78■■□□□ 1.08
IMP4-216ENST00000490895 DEFB132Q7Z7B7 95 aa21.78■■□□□ 1.08
IMP4-216ENST00000490895 PIK3C2AO00443 1686 aa21.78■■□□□ 1.08
IMP4-216ENST00000490895 LARP1Q6PKG0 1096 aaKnown RBP21.77■■□□□ 1.08
IMP4-216ENST00000490895 ZRANB1Q9UGI0 708 aa21.77■■□□□ 1.08
IMP4-216ENST00000490895 TTC21AQ8NDW8 1320 aa21.77■■□□□ 1.07
IMP4-216ENST00000490895 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
IMP4-216ENST00000490895 BARGINQ6ZT62 677 aa21.76■■□□□ 1.07
IMP4-216ENST00000490895 AATKQ6ZMQ8 1374 aa21.75■■□□□ 1.07
IMP4-216ENST00000490895 USP35Q9P2H5 1018 aa21.75■■□□□ 1.07
IMP4-216ENST00000490895 KTN1Q86UP2 1357 aaKnown RBP21.74■■□□□ 1.07
IMP4-216ENST00000490895 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
IMP4-216ENST00000490895 COL5A2P05997 1499 aaPredicted RBP21.74■■□□□ 1.07
IMP4-216ENST00000490895 TCP11L2Q8N4U5 519 aa21.73■■□□□ 1.07
IMP4-216ENST00000490895 SRCAPQ6ZRS2 3230 aa21.73■■□□□ 1.07
IMP4-216ENST00000490895 PUS7Q96PZ0 661 aaKnown RBP21.72■■□□□ 1.07
IMP4-216ENST00000490895 THRAP3Q9Y2W1 955 aaKnown RBP21.72■■□□□ 1.07
IMP4-216ENST00000490895 ZBTB7CA1YPR0 619 aa21.71■■□□□ 1.07
IMP4-216ENST00000490895 KCNH5Q8NCM2 988 aa21.71■■□□□ 1.07
IMP4-216ENST00000490895 CD163L1Q9NR16 1453 aa21.71■■□□□ 1.07
IMP4-216ENST00000490895 ARHGEF25Q86VW2 580 aa21.7■■□□□ 1.06
IMP4-216ENST00000490895 TESK2Q96S53 571 aa21.7■■□□□ 1.06
IMP4-216ENST00000490895 MON2Q7Z3U7 1717 aa21.69■■□□□ 1.06
IMP4-216ENST00000490895 BAG6P46379 1132 aa21.69■■□□□ 1.06
IMP4-216ENST00000490895 TMC1Q8TDI8 760 aa21.69■■□□□ 1.06
IMP4-216ENST00000490895 SLC12A5Q9H2X9 1139 aa21.69■■□□□ 1.06
IMP4-216ENST00000490895 CRB1P82279 1406 aa21.69■■□□□ 1.06
IMP4-216ENST00000490895 COL18A1P39060 1754 aa21.69■■□□□ 1.06
IMP4-216ENST00000490895 ST20-MTHFSA0A0A6YYL1 179 aa21.68■■□□□ 1.06
IMP4-216ENST00000490895 FAM196AQ6ZSG2 479 aa21.68■■□□□ 1.06
IMP4-216ENST00000490895 AXIN2Q9Y2T1 843 aa21.68■■□□□ 1.06
IMP4-216ENST00000490895 USP31Q70CQ4 1352 aa21.67■■□□□ 1.06
IMP4-216ENST00000490895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.67■■□□□ 1.06
IMP4-216ENST00000490895 PDE3BQ13370 1112 aa21.66■■□□□ 1.06
IMP4-216ENST00000490895 HDGFL2Q7Z4V5 671 aaPredicted RBP21.66■■□□□ 1.06
IMP4-216ENST00000490895 NFAT5O94916 1531 aa21.65■■□□□ 1.06
IMP4-216ENST00000490895 SOX12O15370 315 aa21.65■■□□□ 1.06
IMP4-216ENST00000490895 RGPD1P0DJD0 1748 aa21.65■■□□□ 1.06
IMP4-216ENST00000490895 DISP2A7MBM2 1401 aa21.64■■□□□ 1.06
IMP4-216ENST00000490895 WDR17Q8IZU2 1322 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms