RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
COL27A1-206ENST00000490831 CABLES1Q8TDN4 633 aa21.67■■□□□ 1.06
COL27A1-206ENST00000490831 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
COL27A1-206ENST00000490831 TRPC5Q9UL62 973 aaPredicted RBP21.66■■□□□ 1.06
COL27A1-206ENST00000490831 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.65■■□□□ 1.06
COL27A1-206ENST00000490831 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.06
COL27A1-206ENST00000490831 BRD4O60885 1362 aaPredicted RBP21.63■■□□□ 1.05
COL27A1-206ENST00000490831 TIMELESSQ9UNS1 1208 aa21.63■■□□□ 1.05
COL27A1-206ENST00000490831 PAK3O75914 559 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-206ENST00000490831 HAP1P54257 671 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-206ENST00000490831 UNC5CLQ8IV45 518 aa21.61■■□□□ 1.05
COL27A1-206ENST00000490831 CABP1Q9NZU7 370 aa21.61■■□□□ 1.05
COL27A1-206ENST00000490831 RGS12O14924 1447 aa21.61■■□□□ 1.05
COL27A1-206ENST00000490831 NWD2Q9ULI1 1742 aa21.6■■□□□ 1.05
COL27A1-206ENST00000490831 ATAD2Q6PL18 1390 aa21.59■■□□□ 1.05
COL27A1-206ENST00000490831 USP6P35125 1406 aa21.58■■□□□ 1.05
COL27A1-206ENST00000490831 FAM83GA6ND36 823 aa21.58■■□□□ 1.05
COL27A1-206ENST00000490831 PLCH1Q4KWH8 1693 aa21.58■■□□□ 1.05
COL27A1-206ENST00000490831 SSH2Q76I76 1423 aa21.57■■□□□ 1.04
COL27A1-206ENST00000490831 PLEKHG5O94827 1062 aa21.56■■□□□ 1.04
COL27A1-206ENST00000490831 GJD4Q96KN9 370 aaPredicted RBP21.56■■□□□ 1.04
COL27A1-206ENST00000490831 PHRF1Q9P1Y6 1649 aaKnown RBP21.55■■□□□ 1.04
COL27A1-206ENST00000490831 COL14A1Q05707 1796 aaKnown RBP21.55■■□□□ 1.04
COL27A1-206ENST00000490831 USP19O94966 1318 aa21.55■■□□□ 1.04
COL27A1-206ENST00000490831 PUS7Q96PZ0 661 aaKnown RBP21.54■■□□□ 1.04
COL27A1-206ENST00000490831 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
COL27A1-206ENST00000490831 VPS72Q15906 364 aa21.53■■□□□ 1.04
COL27A1-206ENST00000490831 ABTB2Q8N961 1025 aa21.53■■□□□ 1.04
COL27A1-206ENST00000490831 TESK2Q96S53 571 aa21.53■■□□□ 1.04
COL27A1-206ENST00000490831 ZNF692Q9BU19 519 aaPredicted RBP21.53■■□□□ 1.04
COL27A1-206ENST00000490831 GLI3P10071 1580 aa21.53■■□□□ 1.04
COL27A1-206ENST00000490831 AKAP12Q02952 1782 aa21.52■■□□□ 1.04
COL27A1-206ENST00000490831 NRAPQ86VF7 1730 aa21.52■■□□□ 1.03
COL27A1-206ENST00000490831 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
COL27A1-206ENST00000490831 NRKQ7Z2Y5 1582 aa21.5■■□□□ 1.03
COL27A1-206ENST00000490831 ST20-MTHFSA0A0A6YYL1 179 aa21.5■■□□□ 1.03
COL27A1-206ENST00000490831 SLC24A1O60721 1099 aa21.5■■□□□ 1.03
COL27A1-206ENST00000490831 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
COL27A1-206ENST00000490831 KIAA0232Q92628 1395 aa21.49■■□□□ 1.03
COL27A1-206ENST00000490831 UPF1Q92900 1129 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL27A1-206ENST00000490831 PRDM11Q9NQV5 511 aa21.49■■□□□ 1.03
COL27A1-206ENST00000490831 BTG4Q9NY30 223 aa21.49■■□□□ 1.03
COL27A1-206ENST00000490831 CPDO75976 1380 aa21.48■■□□□ 1.03
COL27A1-206ENST00000490831 CD163L1Q9NR16 1453 aa21.47■■□□□ 1.03
COL27A1-206ENST00000490831 ONECUT3O60422 494 aaPredicted RBP21.47■■□□□ 1.03
COL27A1-206ENST00000490831 TTC21BQ7Z4L5 1316 aa21.47■■□□□ 1.03
COL27A1-206ENST00000490831 USP47Q96K76 1375 aa21.47■■□□□ 1.03
COL27A1-206ENST00000490831 PIK3C2AO00443 1686 aa21.47■■□□□ 1.03
COL27A1-206ENST00000490831 SLIT3O75094 1523 aa21.46■■□□□ 1.03
COL27A1-206ENST00000490831 TTC21AQ8NDW8 1320 aa21.46■■□□□ 1.03
COL27A1-206ENST00000490831 GCP02774 474 aa21.45■■□□□ 1.02
COL27A1-206ENST00000490831 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
COL27A1-206ENST00000490831 MON2Q7Z3U7 1717 aa21.45■■□□□ 1.02
COL27A1-206ENST00000490831 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
COL27A1-206ENST00000490831 NLRP6P59044 892 aa21.44■■□□□ 1.02
COL27A1-206ENST00000490831 ZC3H6P61129 1189 aaKnown RBP21.44■■□□□ 1.02
COL27A1-206ENST00000490831 CHRNA2Q15822 529 aa21.42■■□□□ 1.02
COL27A1-206ENST00000490831 LMO7Q8WWI1 1683 aa21.42■■□□□ 1.02
COL27A1-206ENST00000490831 NINLQ9Y2I6 1382 aa21.42■■□□□ 1.02
COL27A1-206ENST00000490831 SPATA31A5Q5VU36 1347 aa21.41■■□□□ 1.02
COL27A1-206ENST00000490831 SPATA31A7Q8IWB4 1347 aa21.41■■□□□ 1.02
COL27A1-206ENST00000490831 SLC12A5Q9H2X9 1139 aa21.41■■□□□ 1.02
COL27A1-206ENST00000490831 CCDC9Q9Y3X0 531 aaKnown RBP21.4■■□□□ 1.02
COL27A1-206ENST00000490831 SEPT12Q8IYM1 358 aa21.39■■□□□ 1.01
COL27A1-206ENST00000490831 TMC1Q8TDI8 760 aa21.39■■□□□ 1.01
COL27A1-206ENST00000490831 CAMTA1Q9Y6Y1 1673 aa21.39■■□□□ 1.01
COL27A1-206ENST00000490831 USP31Q70CQ4 1352 aa21.38■■□□□ 1.01
COL27A1-206ENST00000490831 USP54Q70EL1 1684 aa21.38■■□□□ 1.01
COL27A1-206ENST00000490831 HDGFL2Q7Z4V5 671 aaPredicted RBP21.38■■□□□ 1.01
COL27A1-206ENST00000490831 TERF2IPQ9NYB0 399 aa21.38■■□□□ 1.01
COL27A1-206ENST00000490831 EP400Q96L91 3159 aa21.38■■□□□ 1.01
COL27A1-206ENST00000490831 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
COL27A1-206ENST00000490831 A0A1W2PP64 1363 aa21.37■■□□□ 1.01
COL27A1-206ENST00000490831 TMF1P82094 1093 aa21.37■■□□□ 1.01
COL27A1-206ENST00000490831 AATKQ6ZMQ8 1374 aa21.36■■□□□ 1.01
COL27A1-206ENST00000490831 BRWD3Q6RI45 1802 aa21.36■■□□□ 1.01
COL27A1-206ENST00000490831 SPATA31A1Q5TZJ5 1347 aa21.36■■□□□ 1.01
COL27A1-206ENST00000490831 KCNH5Q8NCM2 988 aa21.35■■□□□ 1.01
COL27A1-206ENST00000490831 NFAT5O94916 1531 aa21.34■■□□□ 1.01
COL27A1-206ENST00000490831 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
COL27A1-206ENST00000490831 COL18A1P39060 1754 aa21.33■■□□□ 1.01
COL27A1-206ENST00000490831 FAM98CQ17RN3 349 aaKnown RBP21.33■■□□□ 1.01
COL27A1-206ENST00000490831 ARHGEF25Q86VW2 580 aa21.33■■□□□ 1.01
COL27A1-206ENST00000490831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.33■■□□□ 1.01
COL27A1-206ENST00000490831 STRN4Q9NRL3 753 aa21.33■■□□□ 1.01
COL27A1-206ENST00000490831 COL5A2P05997 1499 aaPredicted RBP21.32■■□□□ 1
COL27A1-206ENST00000490831 CDCA8Q53HL2 280 aa21.32■■□□□ 1
COL27A1-206ENST00000490831 EVA1CP58658 441 aa21.31■■□□□ 1
COL27A1-206ENST00000490831 NME9Q86XW9 330 aa21.31■■□□□ 1
COL27A1-206ENST00000490831 ANKRD36BQ8N2N9 1353 aa21.31■■□□□ 1
COL27A1-206ENST00000490831 LARP1Q6PKG0 1096 aaKnown RBP21.3■■□□□ 1
COL27A1-206ENST00000490831 KRT27Q7Z3Y8 459 aa21.3■■□□□ 1
COL27A1-206ENST00000490831 CCDC125Q86Z20 511 aa21.3■■□□□ 1
COL27A1-206ENST00000490831 ZRANB1Q9UGI0 708 aa21.3■■□□□ 1
COL27A1-206ENST00000490831 ABCC6O95255 1503 aa21.29■■□□□ 1
COL27A1-206ENST00000490831 BARGINQ6ZT62 677 aa21.29■■□□□ 1
COL27A1-206ENST00000490831 OVOS2A0A0J9YW53 1432 aa21.29■■□□□ 1
COL27A1-206ENST00000490831 OVOS2Q6IE36 1432 aa21.29■■□□□ 1
COL27A1-206ENST00000490831 AXIN2Q9Y2T1 843 aa21.27■■□□□ 1
COL27A1-206ENST00000490831 THRAP3Q9Y2W1 955 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms