RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 CRYBG1Q9Y4K1 1723 aa30.27■■■□□ 2.44
SYNE4-205ENST00000490730 SEPT12Q8IYM1 358 aa30.27■■■□□ 2.44
SYNE4-205ENST00000490730 BTG4Q9NY30 223 aa30.27■■■□□ 2.44
SYNE4-205ENST00000490730 NRAPQ86VF7 1730 aa30.27■■■□□ 2.44
SYNE4-205ENST00000490730 A0A0G2JS52 829 aa30.24■■■□□ 2.43
SYNE4-205ENST00000490730 MYT1Q01538 1121 aa30.24■■■□□ 2.43
SYNE4-205ENST00000490730 L3MBTL2Q969R5 705 aa30.23■■■□□ 2.43
SYNE4-205ENST00000490730 ACEP12821 1306 aa30.22■■■□□ 2.43
SYNE4-205ENST00000490730 CENPJQ9HC77 1338 aaPredicted RBP30.22■■■□□ 2.43
SYNE4-205ENST00000490730 SRPK2P78362 688 aaKnown RBP30.22■■■□□ 2.43
SYNE4-205ENST00000490730 CCDC125Q86Z20 511 aa30.22■■■□□ 2.43
SYNE4-205ENST00000490730 SIN3AQ96ST3 1273 aa30.22■■■□□ 2.43
SYNE4-205ENST00000490730 CCDC61Q9Y6R9 512 aa30.22■■■□□ 2.43
SYNE4-205ENST00000490730 QRICH2Q9H0J4 1663 aa30.22■■■□□ 2.43
SYNE4-205ENST00000490730 NUTM2GQ5VZR2 741 aa30.21■■■□□ 2.43
SYNE4-205ENST00000490730 PRDM11Q9NQV5 511 aa30.21■■■□□ 2.43
SYNE4-205ENST00000490730 NEUROD1Q13562 356 aa30.2■■■□□ 2.43
SYNE4-205ENST00000490730 POLR3AO14802 1390 aaPredicted RBP30.19■■■□□ 2.42
SYNE4-205ENST00000490730 PHRF1Q9P1Y6 1649 aaKnown RBP30.19■■■□□ 2.42
SYNE4-205ENST00000490730 NBPF8Q3BBV2 869 aa30.18■■■□□ 2.42
SYNE4-205ENST00000490730 FAM98CQ17RN3 349 aaKnown RBP30.17■■■□□ 2.42
SYNE4-205ENST00000490730 PLEKHG3A1L390 1219 aa30.16■■■□□ 2.42
SYNE4-205ENST00000490730 KRT27Q7Z3Y8 459 aa30.16■■■□□ 2.42
SYNE4-205ENST00000490730 CABP2Q9NPB3 220 aa30.16■■■□□ 2.42
SYNE4-205ENST00000490730 BLMP54132 1417 aaPredicted RBP30.15■■■□□ 2.42
SYNE4-205ENST00000490730 PPIP5K1Q6PFW1 1433 aa30.15■■■□□ 2.42
SYNE4-205ENST00000490730 ONECUT3O60422 494 aaPredicted RBP30.15■■■□□ 2.42
SYNE4-205ENST00000490730 KIAA0232Q92628 1395 aa30.15■■■□□ 2.42
SYNE4-205ENST00000490730 TRPM1Q7Z4N2 1603 aa30.14■■■□□ 2.42
SYNE4-205ENST00000490730 CHRNA2Q15822 529 aa30.13■■■□□ 2.41
SYNE4-205ENST00000490730 ZC3H6P61129 1189 aaKnown RBP30.12■■■□□ 2.41
SYNE4-205ENST00000490730 SF3B2Q13435 895 aaKnown RBP30.11■■■□□ 2.41
SYNE4-205ENST00000490730 ABTB2Q8N961 1025 aa30.11■■■□□ 2.41
SYNE4-205ENST00000490730 ZRANB1Q9UGI0 708 aa30.11■■■□□ 2.41
SYNE4-205ENST00000490730 SPATA31A5Q5VU36 1347 aa30.09■■■□□ 2.41
SYNE4-205ENST00000490730 SPATA31A7Q8IWB4 1347 aa30.09■■■□□ 2.41
SYNE4-205ENST00000490730 ROCK2O75116 1388 aaKnown RBP30.08■■■□□ 2.41
SYNE4-205ENST00000490730 STRN4Q9NRL3 753 aa30.08■■■□□ 2.41
SYNE4-205ENST00000490730 NRKQ7Z2Y5 1582 aa30.07■■■□□ 2.4
SYNE4-205ENST00000490730 DEFB132Q7Z7B7 95 aa30.06■■■□□ 2.4
SYNE4-205ENST00000490730 CABP1Q9NZU7 370 aa30.03■■■□□ 2.4
SYNE4-205ENST00000490730 EVC2Q86UK5 1308 aa30.02■■■□□ 2.4
SYNE4-205ENST00000490730 THSD7AQ9UPZ6 1657 aa30.01■■■□□ 2.4
SYNE4-205ENST00000490730 USP19O94966 1318 aa30■■■□□ 2.39
SYNE4-205ENST00000490730 SPATA31A1Q5TZJ5 1347 aa30■■■□□ 2.39
SYNE4-205ENST00000490730 EVA1CP58658 441 aa30■■■□□ 2.39
SYNE4-205ENST00000490730 FAM182BQ5T319 152 aa30■■■□□ 2.39
SYNE4-205ENST00000490730 NLRP13Q86W25 1043 aa30■■■□□ 2.39
SYNE4-205ENST00000490730 USP35Q9P2H5 1018 aa29.99■■■□□ 2.39
SYNE4-205ENST00000490730 USP6P35125 1406 aa29.98■■■□□ 2.39
SYNE4-205ENST00000490730 SSH2Q76I76 1423 aa29.96■■■□□ 2.39
SYNE4-205ENST00000490730 BRD4O60885 1362 aaPredicted RBP29.96■■■□□ 2.39
SYNE4-205ENST00000490730 ZBTB7CA1YPR0 619 aa29.96■■■□□ 2.39
SYNE4-205ENST00000490730 SRCAPQ6ZRS2 3230 aa29.96■■■□□ 2.39
SYNE4-205ENST00000490730 CAMTA1Q9Y6Y1 1673 aa29.95■■■□□ 2.39
SYNE4-205ENST00000490730 CPDO75976 1380 aa29.95■■■□□ 2.39
SYNE4-205ENST00000490730 GCP02774 474 aa29.95■■■□□ 2.39
SYNE4-205ENST00000490730 LMO7Q8WWI1 1683 aa29.94■■■□□ 2.38
SYNE4-205ENST00000490730 RGPD1P0DJD0 1748 aa29.93■■■□□ 2.38
SYNE4-205ENST00000490730 BAG6P46379 1132 aa29.93■■■□□ 2.38
SYNE4-205ENST00000490730 NLRP6P59044 892 aa29.93■■■□□ 2.38
SYNE4-205ENST00000490730 LARP1Q6PKG0 1096 aaKnown RBP29.91■■■□□ 2.38
SYNE4-205ENST00000490730 PIK3C2AO00443 1686 aa29.9■■■□□ 2.38
SYNE4-205ENST00000490730 TONSLQ96HA7 1378 aa29.89■■■□□ 2.37
SYNE4-205ENST00000490730 AKAP12Q02952 1782 aa29.87■■■□□ 2.37
SYNE4-205ENST00000490730 CARD11Q9BXL7 1154 aa29.87■■■□□ 2.37
SYNE4-205ENST00000490730 SLIT3O75094 1523 aa29.86■■■□□ 2.37
SYNE4-205ENST00000490730 COL5A2P05997 1499 aaPredicted RBP29.86■■■□□ 2.37
SYNE4-205ENST00000490730 BARGINQ6ZT62 677 aa29.85■■■□□ 2.37
SYNE4-205ENST00000490730 TCP11L2Q8N4U5 519 aa29.85■■■□□ 2.37
SYNE4-205ENST00000490730 TNS1Q9HBL0 1735 aaKnown RBP29.85■■■□□ 2.37
SYNE4-205ENST00000490730 EN1Q05925 392 aaPredicted RBP29.83■■■□□ 2.37
SYNE4-205ENST00000490730 PDE3BQ13370 1112 aa29.83■■■□□ 2.37
SYNE4-205ENST00000490730 ZNF692Q9BU19 519 aaPredicted RBP29.83■■■□□ 2.37
SYNE4-205ENST00000490730 TTC21BQ7Z4L5 1316 aa29.82■■■□□ 2.36
SYNE4-205ENST00000490730 FAM196AQ6ZSG2 479 aa29.82■■■□□ 2.36
SYNE4-205ENST00000490730 KTN1Q86UP2 1357 aaKnown RBP29.8■■■□□ 2.36
SYNE4-205ENST00000490730 SOX12O15370 315 aa29.8■■■□□ 2.36
SYNE4-205ENST00000490730 TRIM37O94972 964 aa29.8■■■□□ 2.36
SYNE4-205ENST00000490730 AATKQ6ZMQ8 1374 aa29.79■■■□□ 2.36
SYNE4-205ENST00000490730 CRB1P82279 1406 aa29.79■■■□□ 2.36
SYNE4-205ENST00000490730 THRAP3Q9Y2W1 955 aaKnown RBP29.78■■■□□ 2.36
SYNE4-205ENST00000490730 SBNO2Q9Y2G9 1366 aa29.77■■■□□ 2.36
SYNE4-205ENST00000490730 TTC21AQ8NDW8 1320 aa29.77■■■□□ 2.36
SYNE4-205ENST00000490730 PSDA5PKW4 1024 aaPredicted RBP29.77■■■□□ 2.36
SYNE4-205ENST00000490730 CPSF1Q10570 1443 aaKnown RBP29.77■■■□□ 2.36
SYNE4-205ENST00000490730 MON2Q7Z3U7 1717 aa29.76■■■□□ 2.35
SYNE4-205ENST00000490730 PARP4Q9UKK3 1724 aaKnown RBP29.75■■■□□ 2.35
SYNE4-205ENST00000490730 COL18A1P39060 1754 aa29.75■■■□□ 2.35
SYNE4-205ENST00000490730 DISP2A7MBM2 1401 aa29.74■■■□□ 2.35
SYNE4-205ENST00000490730 TOM1L2Q6ZVM7 507 aa29.74■■■□□ 2.35
SYNE4-205ENST00000490730 KCNH5Q8NCM2 988 aa29.74■■■□□ 2.35
SYNE4-205ENST00000490730 TMC1Q8TDI8 760 aa29.74■■■□□ 2.35
SYNE4-205ENST00000490730 APBA3O96018 575 aa29.72■■■□□ 2.35
SYNE4-205ENST00000490730 TRIM26Q12899 539 aaPredicted RBP29.72■■■□□ 2.35
SYNE4-205ENST00000490730 EZH2Q15910 746 aaKnown RBP29.72■■■□□ 2.35
SYNE4-205ENST00000490730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.72■■■□□ 2.35
SYNE4-205ENST00000490730 AXIN2Q9Y2T1 843 aa29.71■■■□□ 2.35
SYNE4-205ENST00000490730 RGPD5Q99666 1765 aa29.71■■■□□ 2.35
SYNE4-205ENST00000490730 ARHGEF25Q86VW2 580 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms