RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
FDPS-215ENST00000490140 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
FDPS-215ENST00000490140 ATP7BP35670 1465 aa17.19■□□□□ 0.34
FDPS-215ENST00000490140 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
FDPS-215ENST00000490140 FAM83GA6ND36 823 aa17.19■□□□□ 0.34
FDPS-215ENST00000490140 HRCP23327 699 aa17.19■□□□□ 0.34
FDPS-215ENST00000490140 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
FDPS-215ENST00000490140 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
FDPS-215ENST00000490140 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
FDPS-215ENST00000490140 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
FDPS-215ENST00000490140 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
FDPS-215ENST00000490140 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
FDPS-215ENST00000490140 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
FDPS-215ENST00000490140 LRP5O75197 1615 aa17.15■□□□□ 0.34
FDPS-215ENST00000490140 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
FDPS-215ENST00000490140 SPATA31A5Q5VU36 1347 aa17.14■□□□□ 0.33
FDPS-215ENST00000490140 SPATA31A7Q8IWB4 1347 aa17.14■□□□□ 0.33
FDPS-215ENST00000490140 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
FDPS-215ENST00000490140 PHRF1Q9P1Y6 1649 aaKnown RBP17.13■□□□□ 0.33
FDPS-215ENST00000490140 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
FDPS-215ENST00000490140 TOPAZ1Q8N9V7 1692 aa17.11■□□□□ 0.33
FDPS-215ENST00000490140 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
FDPS-215ENST00000490140 KIAA0232Q92628 1395 aa17.1■□□□□ 0.33
FDPS-215ENST00000490140 DISP2A7MBM2 1401 aa17.1■□□□□ 0.33
FDPS-215ENST00000490140 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
FDPS-215ENST00000490140 SPATA31A1Q5TZJ5 1347 aa17.08■□□□□ 0.32
FDPS-215ENST00000490140 CDK19Q9BWU1 502 aa17.08■□□□□ 0.32
FDPS-215ENST00000490140 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
FDPS-215ENST00000490140 PARD3Q8TEW0 1356 aa17.06■□□□□ 0.32
FDPS-215ENST00000490140 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
FDPS-215ENST00000490140 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
FDPS-215ENST00000490140 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
FDPS-215ENST00000490140 ACEP12821 1306 aa17.05■□□□□ 0.32
FDPS-215ENST00000490140 EVA1CP58658 441 aa17.05■□□□□ 0.32
FDPS-215ENST00000490140 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
FDPS-215ENST00000490140 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
FDPS-215ENST00000490140 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
FDPS-215ENST00000490140 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
FDPS-215ENST00000490140 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
FDPS-215ENST00000490140 CPDO75976 1380 aa17.03■□□□□ 0.32
FDPS-215ENST00000490140 C11orf95C9JLR9 678 aaPredicted RBP17.03■□□□□ 0.32
FDPS-215ENST00000490140 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
FDPS-215ENST00000490140 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
FDPS-215ENST00000490140 EN1Q05925 392 aaPredicted RBP17.03■□□□□ 0.32
FDPS-215ENST00000490140 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
FDPS-215ENST00000490140 CENPJQ9HC77 1338 aaPredicted RBP17.02■□□□□ 0.32
FDPS-215ENST00000490140 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
FDPS-215ENST00000490140 PDE3BQ13370 1112 aa17.02■□□□□ 0.32
FDPS-215ENST00000490140 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
FDPS-215ENST00000490140 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
FDPS-215ENST00000490140 USP19O94966 1318 aa17.01■□□□□ 0.31
FDPS-215ENST00000490140 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
FDPS-215ENST00000490140 FAM182BQ5T319 152 aa17■□□□□ 0.31
FDPS-215ENST00000490140 NUTM2GQ5VZR2 741 aa17■□□□□ 0.31
FDPS-215ENST00000490140 THRAP3Q9Y2W1 955 aaKnown RBP17■□□□□ 0.31
FDPS-215ENST00000490140 TCP11L2Q8N4U5 519 aa16.99■□□□□ 0.31
FDPS-215ENST00000490140 USP35Q9P2H5 1018 aa16.99■□□□□ 0.31
FDPS-215ENST00000490140 LMO7Q8WWI1 1683 aa16.99■□□□□ 0.31
FDPS-215ENST00000490140 QRICH2Q9H0J4 1663 aa16.99■□□□□ 0.31
FDPS-215ENST00000490140 TRIM37O94972 964 aa16.98■□□□□ 0.31
FDPS-215ENST00000490140 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
FDPS-215ENST00000490140 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
FDPS-215ENST00000490140 APBA3O96018 575 aa16.96■□□□□ 0.31
FDPS-215ENST00000490140 PARP4Q9UKK3 1724 aaKnown RBP16.96■□□□□ 0.3
FDPS-215ENST00000490140 COL5A2P05997 1499 aaPredicted RBP16.95■□□□□ 0.3
FDPS-215ENST00000490140 GCP02774 474 aa16.95■□□□□ 0.3
FDPS-215ENST00000490140 EZH2Q15910 746 aaKnown RBP16.95■□□□□ 0.3
FDPS-215ENST00000490140 USP6P35125 1406 aa16.95■□□□□ 0.3
FDPS-215ENST00000490140 CRB1P82279 1406 aa16.95■□□□□ 0.3
FDPS-215ENST00000490140 NBPF1Q3BBV0 1214 aa16.94■□□□□ 0.3
FDPS-215ENST00000490140 NBPF14Q5TI25 921 aa16.94■□□□□ 0.3
FDPS-215ENST00000490140 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
FDPS-215ENST00000490140 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
FDPS-215ENST00000490140 RREB1Q92766 1687 aa16.94■□□□□ 0.3
FDPS-215ENST00000490140 EVC2Q86UK5 1308 aa16.94■□□□□ 0.3
FDPS-215ENST00000490140 OVOS2A0A0G2JMS6 1433 aa16.93■□□□□ 0.3
FDPS-215ENST00000490140 OVOS2A0A0J9YW53 1432 aa16.93■□□□□ 0.3
FDPS-215ENST00000490140 OVOS2Q6IE36 1432 aa16.93■□□□□ 0.3
FDPS-215ENST00000490140 SLIT3O75094 1523 aa16.92■□□□□ 0.3
FDPS-215ENST00000490140 CABP2Q9NPB3 220 aa16.92■□□□□ 0.3
FDPS-215ENST00000490140 AATKQ6ZMQ8 1374 aa16.91■□□□□ 0.3
FDPS-215ENST00000490140 NLRP6P59044 892 aa16.91■□□□□ 0.3
FDPS-215ENST00000490140 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
FDPS-215ENST00000490140 NUP188Q5SRE5 1749 aa16.9■□□□□ 0.3
FDPS-215ENST00000490140 RGPD3A6NKT7 1758 aaPredicted RBP16.89■□□□□ 0.3
FDPS-215ENST00000490140 RGPD4Q7Z3J3 1758 aa16.89■□□□□ 0.3
FDPS-215ENST00000490140 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
FDPS-215ENST00000490140 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.29
FDPS-215ENST00000490140 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
FDPS-215ENST00000490140 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
FDPS-215ENST00000490140 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
FDPS-215ENST00000490140 PIK3C2AO00443 1686 aa16.88■□□□□ 0.29
FDPS-215ENST00000490140 DDB1Q16531 1140 aa16.87■□□□□ 0.29
FDPS-215ENST00000490140 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
FDPS-215ENST00000490140 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
FDPS-215ENST00000490140 LRRC37A3O60309 1634 aa16.87■□□□□ 0.29
FDPS-215ENST00000490140 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
FDPS-215ENST00000490140 TTC21AQ8NDW8 1320 aa16.86■□□□□ 0.29
FDPS-215ENST00000490140 WNK3Q9BYP7 1800 aa16.85■□□□□ 0.29
FDPS-215ENST00000490140 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms