RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 ALS2Q96Q42 1657 aa34.8■■■■□ 3.16
COPS9-203ENST00000489698 GLI3P10071 1580 aa34.8■■■■□ 3.16
COPS9-203ENST00000489698 RALGAPBQ86X10 1494 aa34.79■■■■□ 3.16
COPS9-203ENST00000489698 QRICH2Q9H0J4 1663 aa34.79■■■■□ 3.16
COPS9-203ENST00000489698 ROCK2O75116 1388 aaKnown RBP34.78■■■■□ 3.16
COPS9-203ENST00000489698 CABP2Q9NPB3 220 aa34.77■■■■□ 3.16
COPS9-203ENST00000489698 ACEP12821 1306 aa34.77■■■■□ 3.16
COPS9-203ENST00000489698 TOPAZ1Q8N9V7 1692 aa34.76■■■■□ 3.15
COPS9-203ENST00000489698 FAM83GA6ND36 823 aa34.74■■■■□ 3.15
COPS9-203ENST00000489698 NBPF8Q3BBV2 869 aa34.74■■■■□ 3.15
COPS9-203ENST00000489698 PLEKHG3A1L390 1219 aa34.73■■■■□ 3.15
COPS9-203ENST00000489698 PLCH1Q4KWH8 1693 aa34.73■■■■□ 3.15
COPS9-203ENST00000489698 BRWD3Q6RI45 1802 aa34.71■■■■□ 3.15
COPS9-203ENST00000489698 CCDC9Q9Y3X0 531 aaKnown RBP34.71■■■■□ 3.15
COPS9-203ENST00000489698 POLR3AO14802 1390 aaPredicted RBP34.71■■■■□ 3.15
COPS9-203ENST00000489698 NUTM2GQ5VZR2 741 aa34.69■■■■□ 3.14
COPS9-203ENST00000489698 TONSLQ96HA7 1378 aa34.69■■■■□ 3.14
COPS9-203ENST00000489698 BLMP54132 1417 aaPredicted RBP34.69■■■■□ 3.14
COPS9-203ENST00000489698 PPIP5K1Q6PFW1 1433 aa34.69■■■■□ 3.14
COPS9-203ENST00000489698 NWD2Q9ULI1 1742 aa34.68■■■■□ 3.14
COPS9-203ENST00000489698 VPS72Q15906 364 aa34.66■■■■□ 3.14
COPS9-203ENST00000489698 BTG4Q9NY30 223 aa34.65■■■■□ 3.14
COPS9-203ENST00000489698 EVC2Q86UK5 1308 aa34.64■■■■□ 3.14
COPS9-203ENST00000489698 SEPT12Q8IYM1 358 aa34.63■■■■□ 3.13
COPS9-203ENST00000489698 CRYBG1Q9Y4K1 1723 aa34.63■■■■□ 3.13
COPS9-203ENST00000489698 CABP1Q9NZU7 370 aa34.62■■■■□ 3.13
COPS9-203ENST00000489698 ABTB2Q8N961 1025 aa34.61■■■■□ 3.13
COPS9-203ENST00000489698 PRDM11Q9NQV5 511 aa34.61■■■■□ 3.13
COPS9-203ENST00000489698 COL14A1Q05707 1796 aaKnown RBP34.61■■■■□ 3.13
COPS9-203ENST00000489698 DEFB132Q7Z7B7 95 aa34.59■■■■□ 3.13
COPS9-203ENST00000489698 CARD11Q9BXL7 1154 aa34.59■■■■□ 3.13
COPS9-203ENST00000489698 SF3B2Q13435 895 aaKnown RBP34.57■■■■□ 3.12
COPS9-203ENST00000489698 ZC3H6P61129 1189 aaKnown RBP34.56■■■■□ 3.12
COPS9-203ENST00000489698 PHRF1Q9P1Y6 1649 aaKnown RBP34.55■■■■□ 3.12
COPS9-203ENST00000489698 NRAPQ86VF7 1730 aa34.55■■■■□ 3.12
COPS9-203ENST00000489698 KIAA0232Q92628 1395 aa34.55■■■■□ 3.12
COPS9-203ENST00000489698 CHRNA2Q15822 529 aa34.54■■■■□ 3.12
COPS9-203ENST00000489698 A0A0G2JS52 829 aa34.52■■■■□ 3.12
COPS9-203ENST00000489698 MYT1Q01538 1121 aa34.52■■■■□ 3.12
COPS9-203ENST00000489698 KRT27Q7Z3Y8 459 aa34.51■■■■□ 3.12
COPS9-203ENST00000489698 ONECUT3O60422 494 aaPredicted RBP34.5■■■■□ 3.11
COPS9-203ENST00000489698 NLRP13Q86W25 1043 aa34.5■■■■□ 3.11
COPS9-203ENST00000489698 USP6P35125 1406 aa34.48■■■■□ 3.11
COPS9-203ENST00000489698 FAM98CQ17RN3 349 aaKnown RBP34.48■■■■□ 3.11
COPS9-203ENST00000489698 BRD4O60885 1362 aaPredicted RBP34.47■■■■□ 3.11
COPS9-203ENST00000489698 STRN4Q9NRL3 753 aa34.46■■■■□ 3.11
COPS9-203ENST00000489698 USP19O94966 1318 aa34.44■■■■□ 3.1
COPS9-203ENST00000489698 NRKQ7Z2Y5 1582 aa34.44■■■■□ 3.1
COPS9-203ENST00000489698 NLRP6P59044 892 aa34.43■■■■□ 3.1
COPS9-203ENST00000489698 SPATA31A5Q5VU36 1347 aa34.43■■■■□ 3.1
COPS9-203ENST00000489698 SPATA31A7Q8IWB4 1347 aa34.43■■■■□ 3.1
COPS9-203ENST00000489698 GCP02774 474 aa34.42■■■■□ 3.1
COPS9-203ENST00000489698 EVA1CP58658 441 aa34.41■■■■□ 3.1
COPS9-203ENST00000489698 ZNF692Q9BU19 519 aaPredicted RBP34.4■■■■□ 3.1
COPS9-203ENST00000489698 SBNO2Q9Y2G9 1366 aa34.39■■■■□ 3.1
COPS9-203ENST00000489698 ZBTB7CA1YPR0 619 aa34.38■■■■□ 3.09
COPS9-203ENST00000489698 SSH2Q76I76 1423 aa34.37■■■■□ 3.09
COPS9-203ENST00000489698 BAG6P46379 1132 aa34.36■■■■□ 3.09
COPS9-203ENST00000489698 LRP5O75197 1615 aa34.36■■■■□ 3.09
COPS9-203ENST00000489698 AKAP12Q02952 1782 aa34.36■■■■□ 3.09
COPS9-203ENST00000489698 CPDO75976 1380 aa34.36■■■■□ 3.09
COPS9-203ENST00000489698 SPATA31A1Q5TZJ5 1347 aa34.34■■■■□ 3.09
COPS9-203ENST00000489698 TTC21BQ7Z4L5 1316 aa34.34■■■■□ 3.09
COPS9-203ENST00000489698 PCGF6Q9BYE7 350 aa34.34■■■■□ 3.09
COPS9-203ENST00000489698 USP35Q9P2H5 1018 aa34.34■■■■□ 3.09
COPS9-203ENST00000489698 TMC1Q8TDI8 760 aa34.33■■■■□ 3.09
COPS9-203ENST00000489698 PIK3C2AO00443 1686 aa34.33■■■■□ 3.09
COPS9-203ENST00000489698 KTN1Q86UP2 1357 aaKnown RBP34.33■■■■□ 3.09
COPS9-203ENST00000489698 CAMTA1Q9Y6Y1 1673 aa34.32■■■■□ 3.08
COPS9-203ENST00000489698 PSDA5PKW4 1024 aaPredicted RBP34.31■■■■□ 3.08
COPS9-203ENST00000489698 RGPD1P0DJD0 1748 aa34.3■■■■□ 3.08
COPS9-203ENST00000489698 CPSF1Q10570 1443 aaKnown RBP34.3■■■■□ 3.08
COPS9-203ENST00000489698 LARP1Q6PKG0 1096 aaKnown RBP34.28■■■■□ 3.08
COPS9-203ENST00000489698 LMO7Q8WWI1 1683 aa34.28■■■■□ 3.08
COPS9-203ENST00000489698 TTC21AQ8NDW8 1320 aa34.28■■■■□ 3.08
COPS9-203ENST00000489698 SLIT3O75094 1523 aa34.27■■■■□ 3.08
COPS9-203ENST00000489698 ST20-MTHFSA0A0A6YYL1 179 aa34.27■■■■□ 3.08
COPS9-203ENST00000489698 FAM182BQ5T319 152 aa34.27■■■■□ 3.08
COPS9-203ENST00000489698 SOX12O15370 315 aa34.26■■■■□ 3.08
COPS9-203ENST00000489698 THSD7AQ9UPZ6 1657 aa34.25■■■■□ 3.07
COPS9-203ENST00000489698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.25■■■■□ 3.07
COPS9-203ENST00000489698 SLC12A5Q9H2X9 1139 aa34.25■■■■□ 3.07
COPS9-203ENST00000489698 EN1Q05925 392 aaPredicted RBP34.24■■■■□ 3.07
COPS9-203ENST00000489698 HDGFL2Q7Z4V5 671 aaPredicted RBP34.23■■■■□ 3.07
COPS9-203ENST00000489698 MON2Q7Z3U7 1717 aa34.22■■■■□ 3.07
COPS9-203ENST00000489698 KCNH5Q8NCM2 988 aa34.21■■■■□ 3.07
COPS9-203ENST00000489698 TESK2Q96S53 571 aa34.21■■■■□ 3.07
COPS9-203ENST00000489698 AATKQ6ZMQ8 1374 aa34.2■■■■□ 3.07
COPS9-203ENST00000489698 COL5A2P05997 1499 aaPredicted RBP34.2■■■■□ 3.06
COPS9-203ENST00000489698 TNS1Q9HBL0 1735 aaKnown RBP34.19■■■■□ 3.06
COPS9-203ENST00000489698 TCP11L2Q8N4U5 519 aa34.19■■■■□ 3.06
COPS9-203ENST00000489698 BARGINQ6ZT62 677 aa34.18■■■■□ 3.06
COPS9-203ENST00000489698 CD163L1Q9NR16 1453 aa34.18■■■■□ 3.06
COPS9-203ENST00000489698 PUS7Q96PZ0 661 aaKnown RBP34.17■■■■□ 3.06
COPS9-203ENST00000489698 TERF2IPQ9NYB0 399 aa34.17■■■■□ 3.06
COPS9-203ENST00000489698 NME9Q86XW9 330 aa34.15■■■■□ 3.06
COPS9-203ENST00000489698 DISP2A7MBM2 1401 aa34.14■■■■□ 3.06
COPS9-203ENST00000489698 SLC24A1O60721 1099 aa34.14■■■■□ 3.06
COPS9-203ENST00000489698 ARHGEF25Q86VW2 580 aa34.14■■■■□ 3.06
COPS9-203ENST00000489698 PDE3BQ13370 1112 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms