RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 VPS72Q15906 364 aa16.67■□□□□ 0.26
GGPS1-207ENST00000489692 BTG4Q9NY30 223 aa16.67■□□□□ 0.26
GGPS1-207ENST00000489692 SLIT2O94813 1529 aa16.66■□□□□ 0.26
GGPS1-207ENST00000489692 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
GGPS1-207ENST00000489692 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
GGPS1-207ENST00000489692 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
GGPS1-207ENST00000489692 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
GGPS1-207ENST00000489692 SEPT12Q8IYM1 358 aa16.65■□□□□ 0.26
GGPS1-207ENST00000489692 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
GGPS1-207ENST00000489692 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
GGPS1-207ENST00000489692 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
GGPS1-207ENST00000489692 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
GGPS1-207ENST00000489692 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
GGPS1-207ENST00000489692 ZC3H6P61129 1189 aaKnown RBP16.63■□□□□ 0.25
GGPS1-207ENST00000489692 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
GGPS1-207ENST00000489692 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
GGPS1-207ENST00000489692 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
GGPS1-207ENST00000489692 CARD11Q9BXL7 1154 aa16.62■□□□□ 0.25
GGPS1-207ENST00000489692 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
GGPS1-207ENST00000489692 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
GGPS1-207ENST00000489692 FAM98CQ17RN3 349 aaKnown RBP16.61■□□□□ 0.25
GGPS1-207ENST00000489692 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
GGPS1-207ENST00000489692 EVA1CP58658 441 aa16.6■□□□□ 0.25
GGPS1-207ENST00000489692 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
GGPS1-207ENST00000489692 SF3B2Q13435 895 aaKnown RBP16.59■□□□□ 0.25
GGPS1-207ENST00000489692 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
GGPS1-207ENST00000489692 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
GGPS1-207ENST00000489692 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
GGPS1-207ENST00000489692 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
GGPS1-207ENST00000489692 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
GGPS1-207ENST00000489692 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
GGPS1-207ENST00000489692 NLRP6P59044 892 aa16.56■□□□□ 0.24
GGPS1-207ENST00000489692 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
GGPS1-207ENST00000489692 ITSN1Q15811 1721 aa16.55■□□□□ 0.24
GGPS1-207ENST00000489692 GLI3P10071 1580 aa16.55■□□□□ 0.24
GGPS1-207ENST00000489692 SPATA31A5Q5VU36 1347 aa16.54■□□□□ 0.24
GGPS1-207ENST00000489692 SPATA31A7Q8IWB4 1347 aa16.54■□□□□ 0.24
GGPS1-207ENST00000489692 TIMELESSQ9UNS1 1208 aa16.54■□□□□ 0.24
GGPS1-207ENST00000489692 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
GGPS1-207ENST00000489692 SOX12O15370 315 aa16.53■□□□□ 0.24
GGPS1-207ENST00000489692 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
GGPS1-207ENST00000489692 GCP02774 474 aa16.53■□□□□ 0.24
GGPS1-207ENST00000489692 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
GGPS1-207ENST00000489692 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
GGPS1-207ENST00000489692 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
GGPS1-207ENST00000489692 PLCH1Q4KWH8 1693 aa16.52■□□□□ 0.23
GGPS1-207ENST00000489692 USP6P35125 1406 aa16.52■□□□□ 0.23
GGPS1-207ENST00000489692 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.51■□□□□ 0.23
GGPS1-207ENST00000489692 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
GGPS1-207ENST00000489692 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
GGPS1-207ENST00000489692 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
GGPS1-207ENST00000489692 ABCA3Q99758 1704 aa16.5■□□□□ 0.23
GGPS1-207ENST00000489692 USP19O94966 1318 aa16.5■□□□□ 0.23
GGPS1-207ENST00000489692 SPATA31A1Q5TZJ5 1347 aa16.5■□□□□ 0.23
GGPS1-207ENST00000489692 FAM182BQ5T319 152 aa16.5■□□□□ 0.23
GGPS1-207ENST00000489692 COL14A1Q05707 1796 aaKnown RBP16.5■□□□□ 0.23
GGPS1-207ENST00000489692 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
GGPS1-207ENST00000489692 DEFB132Q7Z7B7 95 aa16.49■□□□□ 0.23
GGPS1-207ENST00000489692 TOPAZ1Q8N9V7 1692 aa16.49■□□□□ 0.23
GGPS1-207ENST00000489692 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
GGPS1-207ENST00000489692 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
GGPS1-207ENST00000489692 LARP1Q6PKG0 1096 aaKnown RBP16.48■□□□□ 0.23
GGPS1-207ENST00000489692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.23
GGPS1-207ENST00000489692 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
GGPS1-207ENST00000489692 PDE3BQ13370 1112 aa16.47■□□□□ 0.23
GGPS1-207ENST00000489692 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
GGPS1-207ENST00000489692 CPDO75976 1380 aa16.47■□□□□ 0.23
GGPS1-207ENST00000489692 BAG6P46379 1132 aa16.46■□□□□ 0.23
GGPS1-207ENST00000489692 TCP11L2Q8N4U5 519 aa16.46■□□□□ 0.23
GGPS1-207ENST00000489692 SSH2Q76I76 1423 aa16.45■□□□□ 0.22
GGPS1-207ENST00000489692 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
GGPS1-207ENST00000489692 KCNH5Q8NCM2 988 aa16.45■□□□□ 0.22
GGPS1-207ENST00000489692 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
GGPS1-207ENST00000489692 SBNO2Q9Y2G9 1366 aa16.43■□□□□ 0.22
GGPS1-207ENST00000489692 ST20-MTHFSA0A0A6YYL1 179 aa16.43■□□□□ 0.22
GGPS1-207ENST00000489692 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
GGPS1-207ENST00000489692 SLC12A5Q9H2X9 1139 aa16.43■□□□□ 0.22
GGPS1-207ENST00000489692 TERF2IPQ9NYB0 399 aa16.43■□□□□ 0.22
GGPS1-207ENST00000489692 EP400Q96L91 3159 aa16.43■□□□□ 0.22
GGPS1-207ENST00000489692 PHRF1Q9P1Y6 1649 aaKnown RBP16.42■□□□□ 0.22
GGPS1-207ENST00000489692 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
GGPS1-207ENST00000489692 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
GGPS1-207ENST00000489692 NRAPQ86VF7 1730 aa16.42■□□□□ 0.22
GGPS1-207ENST00000489692 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
GGPS1-207ENST00000489692 THRAP3Q9Y2W1 955 aaKnown RBP16.41■□□□□ 0.22
GGPS1-207ENST00000489692 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
GGPS1-207ENST00000489692 AATKQ6ZMQ8 1374 aa16.4■□□□□ 0.22
GGPS1-207ENST00000489692 TRIM37O94972 964 aa16.4■□□□□ 0.22
GGPS1-207ENST00000489692 NME9Q86XW9 330 aa16.4■□□□□ 0.22
GGPS1-207ENST00000489692 CRYBG1Q9Y4K1 1723 aa16.39■□□□□ 0.21
GGPS1-207ENST00000489692 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
GGPS1-207ENST00000489692 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.21
GGPS1-207ENST00000489692 CPSF1Q10570 1443 aaKnown RBP16.38■□□□□ 0.21
GGPS1-207ENST00000489692 ARHGEF25Q86VW2 580 aa16.38■□□□□ 0.21
GGPS1-207ENST00000489692 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
GGPS1-207ENST00000489692 AXIN2Q9Y2T1 843 aa16.37■□□□□ 0.21
GGPS1-207ENST00000489692 CRB1P82279 1406 aa16.36■□□□□ 0.21
GGPS1-207ENST00000489692 APBA3O96018 575 aa16.36■□□□□ 0.21
GGPS1-207ENST00000489692 TMF1P82094 1093 aa16.36■□□□□ 0.21
GGPS1-207ENST00000489692 TESK2Q96S53 571 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms