RNA–Protein interactions for RNA: ENST00000489661.5

PRDM15-213, Transcript of PR/SET domain 15, humanhuman

TSL 3

Gene PRDM15, Length 856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-213ENST00000489661 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
PRDM15-213ENST00000489661 RALGAPBQ86X10 1494 aa20.45■□□□□ 0.86
PRDM15-213ENST00000489661 BCL9LQ86UU0 1499 aa20.44■□□□□ 0.86
PRDM15-213ENST00000489661 CABP1Q9NZU7 370 aa20.44■□□□□ 0.86
PRDM15-213ENST00000489661 CCDC9Q9Y3X0 531 aaKnown RBP20.44■□□□□ 0.86
PRDM15-213ENST00000489661 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
PRDM15-213ENST00000489661 ABTB2Q8N961 1025 aa20.43■□□□□ 0.86
PRDM15-213ENST00000489661 GJD4Q96KN9 370 aaPredicted RBP20.43■□□□□ 0.86
PRDM15-213ENST00000489661 RGS12O14924 1447 aa20.42■□□□□ 0.86
PRDM15-213ENST00000489661 SLIT2O94813 1529 aa20.42■□□□□ 0.86
PRDM15-213ENST00000489661 NUTM2GQ5VZR2 741 aa20.41■□□□□ 0.86
PRDM15-213ENST00000489661 PRDM11Q9NQV5 511 aa20.41■□□□□ 0.86
PRDM15-213ENST00000489661 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
PRDM15-213ENST00000489661 FAM83GA6ND36 823 aa20.4■□□□□ 0.86
PRDM15-213ENST00000489661 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
PRDM15-213ENST00000489661 ATAD2Q6PL18 1390 aa20.4■□□□□ 0.86
PRDM15-213ENST00000489661 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
PRDM15-213ENST00000489661 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.39■□□□□ 0.85
PRDM15-213ENST00000489661 VPS72Q15906 364 aa20.38■□□□□ 0.85
PRDM15-213ENST00000489661 NLRP13Q86W25 1043 aa20.38■□□□□ 0.85
PRDM15-213ENST00000489661 BTG4Q9NY30 223 aa20.38■□□□□ 0.85
PRDM15-213ENST00000489661 SBNO2Q9Y2G9 1366 aa20.37■□□□□ 0.85
PRDM15-213ENST00000489661 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
PRDM15-213ENST00000489661 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
PRDM15-213ENST00000489661 NWD2Q9ULI1 1742 aa20.36■□□□□ 0.85
PRDM15-213ENST00000489661 PLCH1Q4KWH8 1693 aa20.36■□□□□ 0.85
PRDM15-213ENST00000489661 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
PRDM15-213ENST00000489661 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
PRDM15-213ENST00000489661 UPF1Q92900 1129 aaKnown RBP eCLIP20.35■□□□□ 0.85
PRDM15-213ENST00000489661 USP6P35125 1406 aa20.35■□□□□ 0.85
PRDM15-213ENST00000489661 COL14A1Q05707 1796 aaKnown RBP20.34■□□□□ 0.85
PRDM15-213ENST00000489661 A0A0G2JS52 829 aa20.34■□□□□ 0.85
PRDM15-213ENST00000489661 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
PRDM15-213ENST00000489661 MYT1Q01538 1121 aa20.34■□□□□ 0.85
PRDM15-213ENST00000489661 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
PRDM15-213ENST00000489661 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
PRDM15-213ENST00000489661 NLRP6P59044 892 aa20.33■□□□□ 0.85
PRDM15-213ENST00000489661 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
PRDM15-213ENST00000489661 ST20-MTHFSA0A0A6YYL1 179 aa20.3■□□□□ 0.84
PRDM15-213ENST00000489661 EVA1CP58658 441 aa20.3■□□□□ 0.84
PRDM15-213ENST00000489661 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
PRDM15-213ENST00000489661 KTN1Q86UP2 1357 aaKnown RBP20.3■□□□□ 0.84
PRDM15-213ENST00000489661 PHRF1Q9P1Y6 1649 aaKnown RBP20.3■□□□□ 0.84
PRDM15-213ENST00000489661 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
PRDM15-213ENST00000489661 GCP02774 474 aa20.29■□□□□ 0.84
PRDM15-213ENST00000489661 SEPT12Q8IYM1 358 aa20.29■□□□□ 0.84
PRDM15-213ENST00000489661 STRN4Q9NRL3 753 aa20.29■□□□□ 0.84
PRDM15-213ENST00000489661 CRYBG1Q9Y4K1 1723 aa20.29■□□□□ 0.84
PRDM15-213ENST00000489661 USP19O94966 1318 aa20.28■□□□□ 0.84
PRDM15-213ENST00000489661 TTC21AQ8NDW8 1320 aa20.28■□□□□ 0.84
PRDM15-213ENST00000489661 GLI3P10071 1580 aa20.28■□□□□ 0.84
PRDM15-213ENST00000489661 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.84
PRDM15-213ENST00000489661 PUS7Q96PZ0 661 aaKnown RBP20.27■□□□□ 0.84
PRDM15-213ENST00000489661 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
PRDM15-213ENST00000489661 FAM98CQ17RN3 349 aaKnown RBP20.26■□□□□ 0.83
PRDM15-213ENST00000489661 CPDO75976 1380 aa20.25■□□□□ 0.83
PRDM15-213ENST00000489661 USP47Q96K76 1375 aa20.25■□□□□ 0.83
PRDM15-213ENST00000489661 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
PRDM15-213ENST00000489661 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
PRDM15-213ENST00000489661 TMF1P82094 1093 aa20.24■□□□□ 0.83
PRDM15-213ENST00000489661 KCNH5Q8NCM2 988 aa20.24■□□□□ 0.83
PRDM15-213ENST00000489661 CPSF1Q10570 1443 aaKnown RBP20.24■□□□□ 0.83
PRDM15-213ENST00000489661 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
PRDM15-213ENST00000489661 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
PRDM15-213ENST00000489661 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
PRDM15-213ENST00000489661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
PRDM15-213ENST00000489661 AKAP12Q02952 1782 aa20.23■□□□□ 0.83
PRDM15-213ENST00000489661 NINLQ9Y2I6 1382 aa20.22■□□□□ 0.83
PRDM15-213ENST00000489661 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
PRDM15-213ENST00000489661 CDCA8Q53HL2 280 aa20.22■□□□□ 0.83
PRDM15-213ENST00000489661 KRT27Q7Z3Y8 459 aa20.22■□□□□ 0.83
PRDM15-213ENST00000489661 TESK2Q96S53 571 aa20.22■□□□□ 0.83
PRDM15-213ENST00000489661 SLC12A5Q9H2X9 1139 aa20.22■□□□□ 0.83
PRDM15-213ENST00000489661 SOX12O15370 315 aa20.21■□□□□ 0.83
PRDM15-213ENST00000489661 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
PRDM15-213ENST00000489661 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
PRDM15-213ENST00000489661 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
PRDM15-213ENST00000489661 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
PRDM15-213ENST00000489661 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
PRDM15-213ENST00000489661 EP400Q96L91 3159 aa20.18■□□□□ 0.82
PRDM15-213ENST00000489661 SLIT3O75094 1523 aa20.17■□□□□ 0.82
PRDM15-213ENST00000489661 AATKQ6ZMQ8 1374 aa20.17■□□□□ 0.82
PRDM15-213ENST00000489661 EDC4Q6P2E9 1401 aaKnown RBP20.17■□□□□ 0.82
PRDM15-213ENST00000489661 MON2Q7Z3U7 1717 aa20.16■□□□□ 0.82
PRDM15-213ENST00000489661 LARP1Q6PKG0 1096 aaKnown RBP20.16■□□□□ 0.82
PRDM15-213ENST00000489661 A0A1W2PP64 1363 aa20.15■□□□□ 0.82
PRDM15-213ENST00000489661 CAMTA1Q9Y6Y1 1673 aa20.15■□□□□ 0.82
PRDM15-213ENST00000489661 BRWD3Q6RI45 1802 aa20.14■□□□□ 0.81
PRDM15-213ENST00000489661 NME9Q86XW9 330 aa20.14■□□□□ 0.81
PRDM15-213ENST00000489661 TCP11L2Q8N4U5 519 aa20.14■□□□□ 0.81
PRDM15-213ENST00000489661 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
PRDM15-213ENST00000489661 CD163L1Q9NR16 1453 aa20.13■□□□□ 0.81
PRDM15-213ENST00000489661 CSB-PGBD3P0DP91 1061 aa20.13■□□□□ 0.81
PRDM15-213ENST00000489661 LMO7Q8WWI1 1683 aa20.13■□□□□ 0.81
PRDM15-213ENST00000489661 COL5A2P05997 1499 aaPredicted RBP20.12■□□□□ 0.81
PRDM15-213ENST00000489661 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
PRDM15-213ENST00000489661 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
PRDM15-213ENST00000489661 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
PRDM15-213ENST00000489661 TOM1L2Q6ZVM7 507 aa20.12■□□□□ 0.81
PRDM15-213ENST00000489661 ARHGEF25Q86VW2 580 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms